Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AL596211.1-201ENST00000569873 2277 ntBASIC-0.86□□□□□ -2.55
COMMD3Q9UBI1 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 RNU6-674P-201ENST00000363831 107 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 SNORA69-201ENST00000383895 132 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 SNORA1-201ENST00000384107 130 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 MIR517A-201ENST00000385001 87 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 AL031003.1-201ENST00000404229 172 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 RNU6-437P-201ENST00000459408 95 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 AC007751.1-201ENST00000529260 376 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 LRRC34P1-201ENST00000542742 915 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 AP000942.4-201ENST00000604811 241 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 MIR6507-201ENST00000613630 70 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 AC073869.9-201ENST00000641610 120 ntBASIC-0.87□□□□□ -2.55
COMMD3Q9UBI1 MIR101-2-201ENST00000362195 79 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 RNU6-595P-201ENST00000363944 107 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 RNU4-20P-201ENST00000365601 151 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 RNU6-95P-201ENST00000384697 107 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 RNU6-535P-201ENST00000384722 107 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 AL593851.1-201ENST00000426171 157 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 MTATP6P13-201ENST00000438531 667 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 MTATP6P26-201ENST00000445926 662 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 MTND1P11-201ENST00000456661 876 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 SNORA40.9-201ENST00000515895 93 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 RNU6-966P-201ENST00000516479 104 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 MIR4636-201ENST00000582271 80 ntBASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.88□□□□□ -2.55
COMMD3Q9UBI1 RNY1P16-201ENST00000363063 111 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 RNU4-66P-201ENST00000365199 138 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 MIR604-201ENST00000384880 94 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 SNORA40.4-201ENST00000390971 128 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 RNU6-192P-201ENST00000391253 100 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 AL603910.2-201ENST00000407268 136 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 RNA5SP118-201ENST00000410385 109 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 HMGN1P33-201ENST00000432945 451 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 CHEK2P4-201ENST00000450340 246 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 RN7SL660P-201ENST00000614852 299 ntBASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.89□□□□□ -2.55
COMMD3Q9UBI1 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 RNU6-708P-201ENST00000384217 107 ntBASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 MIR514A2-201ENST00000385131 88 ntBASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 MIR514A3-201ENST00000385132 88 ntBASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 SNORD12C-201ENST00000386307 89 ntBASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 RNU7-53P-201ENST00000516705 60 ntBASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 RNU6-958P-201ENST00000516995 106 ntBASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 MIR5188-201ENST00000583467 113 ntBASIC-0.9□□□□□ -2.55
COMMD3Q9UBI1 FGF7P2-201ENST00000332473 296 ntBASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 RNU6-403P-201ENST00000363163 104 ntBASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 RNU4-73P-201ENST00000363164 141 ntBASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 RNU6-596P-201ENST00000365395 98 ntBASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 RNU6-767P-201ENST00000384132 107 ntBASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 SNORD37.1-201ENST00000390968 65 ntBASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 SNORD72-201ENST00000390994 80 ntBASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 RNA5SP401-201ENST00000515920 127 ntBASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 RNU7-116P-201ENST00000516940 62 ntBASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 AC124312.5-201ENST00000604451 268 ntBASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 AP001330.5-201ENST00000607176 411 ntBASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 AC084368.1-201ENST00000620935 65 ntBASIC-0.91□□□□□ -2.56
COMMD3Q9UBI1 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.92□□□□□ -2.56
COMMD3Q9UBI1 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.92□□□□□ -2.56
COMMD3Q9UBI1 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.92□□□□□ -2.56
COMMD3Q9UBI1 SNORA72.3-201ENST00000365074 132 ntBASIC-0.92□□□□□ -2.56
COMMD3Q9UBI1 SNORD75.1-201ENST00000408373 60 ntBASIC-0.92□□□□□ -2.56
COMMD3Q9UBI1 MTND3P21-201ENST00000433774 331 ntBASIC-0.92□□□□□ -2.56
COMMD3Q9UBI1 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.92□□□□□ -2.56
COMMD3Q9UBI1 RPL39P25-201ENST00000449384 154 ntBASIC-0.92□□□□□ -2.56
COMMD3Q9UBI1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.92□□□□□ -2.56
COMMD3Q9UBI1 AC011352.1-201ENST00000512300 793 ntBASIC-0.92□□□□□ -2.56
COMMD3Q9UBI1 RNU6-311P-201ENST00000516224 102 ntBASIC-0.92□□□□□ -2.56
COMMD3Q9UBI1 MTND5P34-201ENST00000568888 325 ntBASIC-0.92□□□□□ -2.56
COMMD3Q9UBI1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.93□□□□□ -2.56
COMMD3Q9UBI1 RNU6-254P-201ENST00000363377 107 ntBASIC-0.93□□□□□ -2.56
COMMD3Q9UBI1 RNU6-522P-201ENST00000364497 107 ntBASIC-0.93□□□□□ -2.56
COMMD3Q9UBI1 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.93□□□□□ -2.56
COMMD3Q9UBI1 AC096949.1-201ENST00000412047 152 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms