Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.49□□□□□ -2.17
HCN3Q9P1Z3 MIR526A1-201ENST00000384897 85 ntBASIC1.48□□□□□ -2.17
HCN3Q9P1Z3 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
HCN3Q9P1Z3 Y_RNA.590-201ENST00000410140 107 ntBASIC1.48□□□□□ -2.17
HCN3Q9P1Z3 AP1B1P2-201ENST00000416196 106 ntBASIC1.48□□□□□ -2.17
HCN3Q9P1Z3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.48□□□□□ -2.17
HCN3Q9P1Z3 HMGN2P32-201ENST00000444648 269 ntBASIC1.48□□□□□ -2.17
HCN3Q9P1Z3 RNU1-98P-201ENST00000458992 160 ntBASIC1.48□□□□□ -2.17
HCN3Q9P1Z3 RNU6-947P-201ENST00000516264 106 ntBASIC1.48□□□□□ -2.17
HCN3Q9P1Z3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.48□□□□□ -2.17
HCN3Q9P1Z3 AC006006.1-201ENST00000603082 144 ntBASIC1.48□□□□□ -2.17
HCN3Q9P1Z3 RNU4-10P-201ENST00000364383 140 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 RNU6-969P-201ENST00000383900 105 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 MIR568-201ENST00000385036 95 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 MIR653-201ENST00000385279 96 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 RNU2-38P-201ENST00000410856 79 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 RPL30P7-201ENST00000479312 323 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 NDUFA4P2-201ENST00000489989 244 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 RNU6-1007P-201ENST00000516586 107 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 RN7SKP88-201ENST00000516847 250 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 CYP3A52P-201ENST00000563326 91 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 MIR3664-201ENST00000579074 99 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 AC012433.1-201ENST00000588916 398 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 AL645939.4-201ENST00000604495 135 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 7SK.8-201ENST00000612110 250 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 7SK.11-201ENST00000615477 250 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 7SK.13-201ENST00000622040 250 ntBASIC1.47□□□□□ -2.17
HCN3Q9P1Z3 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
HCN3Q9P1Z3 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
HCN3Q9P1Z3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
HCN3Q9P1Z3 SNORA67.6-201ENST00000391093 99 ntBASIC1.46□□□□□ -2.18
HCN3Q9P1Z3 RNU6-651P-201ENST00000411040 105 ntBASIC1.46□□□□□ -2.18
HCN3Q9P1Z3 MTND3P2-201ENST00000438452 342 ntBASIC1.46□□□□□ -2.18
HCN3Q9P1Z3 snoU13.18-201ENST00000459483 104 ntBASIC1.46□□□□□ -2.18
HCN3Q9P1Z3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.46□□□□□ -2.18
HCN3Q9P1Z3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.46□□□□□ -2.18
HCN3Q9P1Z3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.46□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.802-201ENST00000614892 130 ntBASIC1.46□□□□□ -2.18
HCN3Q9P1Z3 AC068700.1-201ENST00000565862 3754 ntBASIC1.45□□□□□ -2.18
HCN3Q9P1Z3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.45□□□□□ -2.18
HCN3Q9P1Z3 RNU6-442P-201ENST00000383968 104 ntBASIC1.45□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.556-201ENST00000384677 113 ntBASIC1.45□□□□□ -2.18
HCN3Q9P1Z3 MIR136-201ENST00000385207 82 ntBASIC1.45□□□□□ -2.18
HCN3Q9P1Z3 AL603910.2-201ENST00000407268 136 ntBASIC1.45□□□□□ -2.18
HCN3Q9P1Z3 RNU4-62P-201ENST00000410125 130 ntBASIC1.45□□□□□ -2.18
HCN3Q9P1Z3 AC015922.2-201ENST00000435593 184 ntBASIC1.45□□□□□ -2.18
HCN3Q9P1Z3 SNORD11-201ENST00000459124 84 ntBASIC1.45□□□□□ -2.18
HCN3Q9P1Z3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.45□□□□□ -2.18
HCN3Q9P1Z3 AC087685.1-201ENST00000587507 141 ntBASIC1.45□□□□□ -2.18
HCN3Q9P1Z3 AL049861.1-201ENST00000603130 150 ntBASIC1.45□□□□□ -2.18
HCN3Q9P1Z3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HCN3Q9P1Z3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.24-201ENST00000362508 103 ntBASIC1.44□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.277-201ENST00000364754 102 ntBASIC1.44□□□□□ -2.18
HCN3Q9P1Z3 MIR1304-201ENST00000408243 91 ntBASIC1.44□□□□□ -2.18
HCN3Q9P1Z3 SNORD127-201ENST00000458892 86 ntBASIC1.44□□□□□ -2.18
HCN3Q9P1Z3 AC090142.3-201ENST00000519012 385 ntBASIC1.44□□□□□ -2.18
HCN3Q9P1Z3 AL161722.3-201ENST00000605789 2983 ntBASIC1.44□□□□□ -2.18
HCN3Q9P1Z3 RNU6-60P-201ENST00000364792 103 ntBASIC1.43□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.352-201ENST00000365439 102 ntBASIC1.43□□□□□ -2.18
HCN3Q9P1Z3 RNU6-196P-201ENST00000384315 107 ntBASIC1.43□□□□□ -2.18
HCN3Q9P1Z3 SNORA8.3-201ENST00000384679 139 ntBASIC1.43□□□□□ -2.18
HCN3Q9P1Z3 SNORD41-201ENST00000386967 70 ntBASIC1.43□□□□□ -2.18
HCN3Q9P1Z3 SNORD72-201ENST00000390994 80 ntBASIC1.43□□□□□ -2.18
HCN3Q9P1Z3 RNU6-1132P-201ENST00000459214 107 ntBASIC1.43□□□□□ -2.18
HCN3Q9P1Z3 AC023790.1-201ENST00000482174 347 ntBASIC1.43□□□□□ -2.18
HCN3Q9P1Z3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.43□□□□□ -2.18
HCN3Q9P1Z3 AC008507.4-201ENST00000585464 127 ntBASIC1.43□□□□□ -2.18
HCN3Q9P1Z3 AL512598.1-201ENST00000610158 273 ntBASIC1.43□□□□□ -2.18
HCN3Q9P1Z3 MIR8065-201ENST00000620577 100 ntBASIC1.43□□□□□ -2.18
HCN3Q9P1Z3 SNORD38C-201ENST00000384381 69 ntBASIC1.42□□□□□ -2.18
HCN3Q9P1Z3 RNA5SP496-201ENST00000391240 109 ntBASIC1.42□□□□□ -2.18
HCN3Q9P1Z3 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
HCN3Q9P1Z3 SNORA18.7-201ENST00000516910 131 ntBASIC1.42□□□□□ -2.18
HCN3Q9P1Z3 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
HCN3Q9P1Z3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.42□□□□□ -2.18
HCN3Q9P1Z3 AL357312.1-201ENST00000603879 298 ntBASIC1.42□□□□□ -2.18
HCN3Q9P1Z3 U4.1-201ENST00000620349 87 ntBASIC1.42□□□□□ -2.18
HCN3Q9P1Z3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HCN3Q9P1Z3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
HCN3Q9P1Z3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.82-201ENST00000363000 102 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.92-201ENST00000363043 102 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.235-201ENST00000364412 102 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.306-201ENST00000365015 102 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.312-201ENST00000365089 102 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.322-201ENST00000365151 102 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.477-201ENST00000384352 108 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.518-201ENST00000384552 113 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 MIR526A2-201ENST00000390198 65 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 MIR548H3-201ENST00000408771 118 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 RPL39P39-201ENST00000455840 151 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.650-201ENST00000459002 102 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.777-201ENST00000516982 102 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.771-201ENST00000598668 102 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 377 ms