Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 Y_RNA.213-201ENST00000364178 111 ntBASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 SNORA63D-201ENST00000364359 132 ntBASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 RNU6-1292P-201ENST00000383856 107 ntBASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 RNU6-24P-201ENST00000384440 107 ntBASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 SUMO1P4-201ENST00000429430 302 ntBASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 HMGN2P34-201ENST00000437647 269 ntBASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 UBBP3-201ENST00000445497 241 ntBASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 SNORA4.4-201ENST00000515921 135 ntBASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 SCARNA23-201ENST00000516060 130 ntBASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 RNU6-240P-201ENST00000516098 97 ntBASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 RNU2-34P-201ENST00000516534 121 ntBASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 DEFB122-202ENST00000569013 197 ntBASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 MIR4446-201ENST00000578505 67 ntBASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LMCD1Q9NZU5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 RNU6-776P-201ENST00000364403 104 ntBASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 RNU6-1022P-201ENST00000365049 104 ntBASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 RNU6-546P-201ENST00000383991 107 ntBASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 RNU6-1328P-201ENST00000410938 106 ntBASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 SNRPGP10-201ENST00000432323 225 ntBASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 RNU7-171P-201ENST00000459581 62 ntBASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 RN7SL633P-201ENST00000488974 297 ntBASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 SEM1P1-201ENST00000506694 209 ntBASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 RNU6-693P-201ENST00000516134 107 ntBASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 RNU6-1291P-201ENST00000516591 104 ntBASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 AC022217.4-201ENST00000604389 163 ntBASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 AC010297.1-201ENST00000623948 149 ntBASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LMCD1Q9NZU5 ICE2P2-201ENST00000483823 2787 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 RNY3P2-201ENST00000362918 102 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 Y_RNA.265-201ENST00000364677 108 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 RNU1-138P-201ENST00000384093 164 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 MIR548D2-201ENST00000384955 97 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 RPS26P48-201ENST00000491713 339 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 HMGN1P7-201ENST00000491722 313 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 RNU7-61P-201ENST00000515897 61 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 RNU6-991P-201ENST00000516168 107 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 SNORA31.15-201ENST00000516771 132 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 MIR3670-2-201ENST00000582974 65 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 MIR3670-1-201ENST00000584160 65 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 MIR3670-3-201ENST00000584855 65 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 AL049779.4-201ENST00000604500 156 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 MIR3670-4-201ENST00000612260 65 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 U2.20-201ENST00000613956 192 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 MIR376A2-201ENST00000636782 80 ntBASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.92□□□□□ -1.94
LMCD1Q9NZU5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 MIR520G-201ENST00000385064 90 ntBASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 FO393413.1-201ENST00000402892 195 ntBASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 RNA5SP425-201ENST00000410336 112 ntBASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 AC060773.1-201ENST00000421698 310 ntBASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 RPS29P12-201ENST00000460178 152 ntBASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 DEFB131E-201ENST00000532329 154 ntBASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 U7.3-201ENST00000616123 62 ntBASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 MIR7157-201ENST00000635801 60 ntBASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 AL162726.3-218ENST00000636401 95 ntBASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 MIR7515-201ENST00000637837 67 ntBASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
LMCD1Q9NZU5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
LMCD1Q9NZU5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 SNORD115-13-201ENST00000363358 82 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 SNORD115-16-201ENST00000363887 82 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 Y_RNA.253-201ENST00000364562 112 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 Y_RNA.267-201ENST00000364679 109 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 SNORD115-1-201ENST00000364961 82 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 Y_RNA.437-201ENST00000384113 113 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 RNU6-482P-201ENST00000391068 107 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 SNORD77.3-201ENST00000391113 65 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 AL451046.2-201ENST00000403074 277 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 MICF-203ENST00000432679 129 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 AL161788.1-201ENST00000441805 169 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 AC015712.3-201ENST00000559380 164 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 MIR4648-201ENST00000580107 72 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 MIR3199-1-201ENST00000582434 88 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 MIR4662A-201ENST00000637499 67 ntBASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LMCD1Q9NZU5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 RNU6-888P-201ENST00000363010 101 ntBASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 RNU4-36P-201ENST00000364294 144 ntBASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 RNU6-219P-201ENST00000364728 107 ntBASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 RNU1-133P-201ENST00000364867 167 ntBASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 RNU6-644P-201ENST00000391155 98 ntBASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 RNU6-402P-201ENST00000410678 103 ntBASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 AC096949.1-201ENST00000412047 152 ntBASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 Z98742.3-201ENST00000418637 326 ntBASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 AC123900.1-201ENST00000420390 96 ntBASIC2.89□□□□□ -1.95
LMCD1Q9NZU5 CKS1BP2-201ENST00000497342 240 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms