Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 Y_RNA.215-201ENST00000364204 112 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 Y_RNA.337-201ENST00000365312 102 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-728P-201ENST00000365375 104 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 MT-TT-201ENST00000387460 66 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 SNORA40.18-201ENST00000391200 128 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 HMGN2P19-201ENST00000425149 265 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 AC245047.4-201ENST00000433189 144 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 RPS27P1-201ENST00000450552 247 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 AC245047.8-201ENST00000456455 284 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-1291P-201ENST00000516591 104 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 AC011604.1-201ENST00000545978 196 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 DNAJC19P2-201ENST00000593340 302 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 AC022217.4-201ENST00000604389 163 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 AL021707.8-201ENST00000609428 183 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 AC018630.2-201ENST00000534866 2403 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 Y_RNA.497-201ENST00000384447 98 ntBASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 Y_RNA.568-201ENST00000384742 113 ntBASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR676-201ENST00000390702 67 ntBASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU11-5P-201ENST00000391216 129 ntBASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 AL606845.1-201ENST00000404881 255 ntBASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 AL121914.1-201ENST00000450188 156 ntBASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 SNORD116-25-201ENST00000516517 92 ntBASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 SNORA31.17-201ENST00000516953 127 ntBASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR548AI-201ENST00000579940 88 ntBASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NCKIPSDQ9NZQ3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-151P-201ENST00000364158 107 ntBASIC1.86□□□□□ -2.11
NCKIPSDQ9NZQ3 Y_RNA.291-201ENST00000364886 113 ntBASIC1.86□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-643P-201ENST00000384018 107 ntBASIC1.86□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-1081P-201ENST00000384537 107 ntBASIC1.86□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR15B-201ENST00000385045 98 ntBASIC1.86□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR520G-201ENST00000385064 90 ntBASIC1.86□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU4-43P-201ENST00000410628 137 ntBASIC1.86□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR548X2-201ENST00000579776 100 ntBASIC1.86□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR4713-201ENST00000582691 75 ntBASIC1.86□□□□□ -2.11
NCKIPSDQ9NZQ3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 SNORA1B-201ENST00000362535 133 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU1-17P-201ENST00000363022 152 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 Y_RNA.203-201ENST00000364106 102 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 RNA5SP109-201ENST00000391010 116 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU2-55P-201ENST00000411146 174 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 RN7SKP101-201ENST00000411376 320 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 RPL23AP63-201ENST00000498752 471 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 MRPS17P9-201ENST00000511924 393 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-561P-201ENST00000516222 102 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-341P-201ENST00000516973 96 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR3646-201ENST00000578301 84 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR3683-201ENST00000580847 82 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR2681-201ENST00000581814 105 ntBASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.85□□□□□ -2.11
NCKIPSDQ9NZQ3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.84□□□□□ -2.11
NCKIPSDQ9NZQ3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.84□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-1117P-201ENST00000384525 104 ntBASIC1.84□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-296P-201ENST00000384608 107 ntBASIC1.84□□□□□ -2.11
NCKIPSDQ9NZQ3 SNORA12.1-201ENST00000390873 148 ntBASIC1.84□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-131P-201ENST00000391144 107 ntBASIC1.84□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR513C-201ENST00000401352 84 ntBASIC1.84□□□□□ -2.11
NCKIPSDQ9NZQ3 RPL30P13-201ENST00000418873 348 ntBASIC1.84□□□□□ -2.11
NCKIPSDQ9NZQ3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.84□□□□□ -2.11
NCKIPSDQ9NZQ3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.84□□□□□ -2.11
NCKIPSDQ9NZQ3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.84□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
NCKIPSDQ9NZQ3 AC091895.1-201ENST00000624494 256 ntBASIC1.84□□□□□ -2.11
NCKIPSDQ9NZQ3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-199P-201ENST00000362954 107 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-1209P-201ENST00000363655 107 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU4-41P-201ENST00000364426 143 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 Y_RNA.253-201ENST00000364562 112 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR569-201ENST00000385228 96 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORA79-201ENST00000408376 140 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 AC006461.1-201ENST00000412637 326 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 CYCSP49-201ENST00000420810 319 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 HSPE1P9-201ENST00000440046 311 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 AC233266.1-201ENST00000454518 96 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORD11-201ENST00000459124 84 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORA25.15-201ENST00000516487 89 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 RNA5SP481-201ENST00000516814 122 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 AL096840.1-201ENST00000603287 93 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 AC242852.1-201ENST00000612151 96 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 AC244015.1-201ENST00000622301 99 ntBASIC1.83□□□□□ -2.12
NCKIPSDQ9NZQ3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORA63D-201ENST00000364359 132 ntBASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU4-11P-201ENST00000365287 132 ntBASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 324.3 ms