Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 Y_RNA.52-201ENST00000362760 96 ntBASIC2.44□□□□□ -2.02
CLDND1Q9NY35 Y_RNA.294-201ENST00000364916 102 ntBASIC2.44□□□□□ -2.02
CLDND1Q9NY35 RNU6-1292P-201ENST00000383856 107 ntBASIC2.44□□□□□ -2.02
CLDND1Q9NY35 MIR891A-201ENST00000401237 79 ntBASIC2.44□□□□□ -2.02
CLDND1Q9NY35 AC069257.2-201ENST00000441819 155 ntBASIC2.44□□□□□ -2.02
CLDND1Q9NY35 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDND1Q9NY35 RN7SL499P-201ENST00000481141 276 ntBASIC2.44□□□□□ -2.02
CLDND1Q9NY35 RNU6-693P-201ENST00000516134 107 ntBASIC2.44□□□□□ -2.02
CLDND1Q9NY35 RNVU1-2-201ENST00000516326 135 ntBASIC2.44□□□□□ -2.02
CLDND1Q9NY35 SNORA31.10-201ENST00000516482 106 ntBASIC2.44□□□□□ -2.02
CLDND1Q9NY35 Y_RNA.757-201ENST00000578934 114 ntBASIC2.44□□□□□ -2.02
CLDND1Q9NY35 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.44□□□□□ -2.02
CLDND1Q9NY35 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CLDND1Q9NY35 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLDND1Q9NY35 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLDND1Q9NY35 RNU6-1084P-201ENST00000362498 107 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 SNORD14E-201ENST00000364009 85 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 SNORA63D-201ENST00000364359 132 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 snoU2-30.1-201ENST00000365012 70 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 RNU6-442P-201ENST00000383968 104 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 SNORA67.3-201ENST00000384366 140 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 MIR518F-201ENST00000384973 87 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 MIR802-201ENST00000390235 94 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CLDND1Q9NY35 SNRPGP14-201ENST00000435400 219 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 STAG3L5P-204ENST00000443759 179 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 RNU6-659P-201ENST00000516454 104 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 Y_RNA.692-201ENST00000516627 105 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 SNORD45.4-201ENST00000516629 73 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLDND1Q9NY35 AP000942.3-201ENST00000603702 160 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 AC006441.5-201ENST00000612680 209 ntBASIC2.43□□□□□ -2.02
CLDND1Q9NY35 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLDND1Q9NY35 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLDND1Q9NY35 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
CLDND1Q9NY35 Y_RNA.280-201ENST00000364765 112 ntBASIC2.42□□□□□ -2.02
CLDND1Q9NY35 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CLDND1Q9NY35 SNORA48.1-201ENST00000390879 135 ntBASIC2.42□□□□□ -2.02
CLDND1Q9NY35 AL603914.1-201ENST00000401964 204 ntBASIC2.42□□□□□ -2.02
CLDND1Q9NY35 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.42□□□□□ -2.02
CLDND1Q9NY35 Y_RNA.629-201ENST00000411368 105 ntBASIC2.42□□□□□ -2.02
CLDND1Q9NY35 AC108729.3-201ENST00000513484 108 ntBASIC2.42□□□□□ -2.02
CLDND1Q9NY35 RNU6-295P-201ENST00000516901 104 ntBASIC2.42□□□□□ -2.02
CLDND1Q9NY35 MIR3121-201ENST00000579680 77 ntBASIC2.42□□□□□ -2.02
CLDND1Q9NY35 SNORD14A-201ENST00000606526 91 ntBASIC2.42□□□□□ -2.02
CLDND1Q9NY35 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLDND1Q9NY35 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLDND1Q9NY35 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLDND1Q9NY35 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLDND1Q9NY35 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLDND1Q9NY35 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CLDND1Q9NY35 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLDND1Q9NY35 RNU6-268P-201ENST00000364174 107 ntBASIC2.41□□□□□ -2.02
CLDND1Q9NY35 SNORD18B-201ENST00000365659 72 ntBASIC2.41□□□□□ -2.02
CLDND1Q9NY35 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CLDND1Q9NY35 SNORD77.3-201ENST00000391113 65 ntBASIC2.41□□□□□ -2.02
CLDND1Q9NY35 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDND1Q9NY35 HSPE1P9-201ENST00000440046 311 ntBASIC2.41□□□□□ -2.02
CLDND1Q9NY35 RNU7-107P-201ENST00000459121 61 ntBASIC2.41□□□□□ -2.02
CLDND1Q9NY35 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDND1Q9NY35 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDND1Q9NY35 SNORA28-201ENST00000606769 126 ntBASIC2.41□□□□□ -2.02
CLDND1Q9NY35 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.41□□□□□ -2.02
CLDND1Q9NY35 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CLDND1Q9NY35 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CLDND1Q9NY35 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.4□□□□□ -2.02
CLDND1Q9NY35 Y_RNA.336-201ENST00000365307 109 ntBASIC2.4□□□□□ -2.03
CLDND1Q9NY35 SNORA80E-201ENST00000384744 137 ntBASIC2.4□□□□□ -2.03
CLDND1Q9NY35 MIR221-201ENST00000385135 110 ntBASIC2.4□□□□□ -2.03
CLDND1Q9NY35 MIR548O-201ENST00000408583 114 ntBASIC2.4□□□□□ -2.03
CLDND1Q9NY35 AL158823.1-201ENST00000418441 478 ntBASIC2.4□□□□□ -2.03
CLDND1Q9NY35 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CLDND1Q9NY35 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.4□□□□□ -2.03
CLDND1Q9NY35 Y_RNA.690-201ENST00000516603 95 ntBASIC2.4□□□□□ -2.03
CLDND1Q9NY35 AC090049.2-201ENST00000550377 109 ntBASIC2.4□□□□□ -2.03
CLDND1Q9NY35 MIR5007-201ENST00000583098 95 ntBASIC2.4□□□□□ -2.03
CLDND1Q9NY35 AL359881.1-201ENST00000602916 267 ntBASIC2.4□□□□□ -2.03
CLDND1Q9NY35 MIR219B-201ENST00000637023 88 ntBASIC2.4□□□□□ -2.03
CLDND1Q9NY35 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CLDND1Q9NY35 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLDND1Q9NY35 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLDND1Q9NY35 MIRLET7C-201ENST00000362160 84 ntBASIC2.39□□□□□ -2.03
CLDND1Q9NY35 RNU6-235P-201ENST00000362644 107 ntBASIC2.39□□□□□ -2.03
CLDND1Q9NY35 VTRNA1-1-201ENST00000363120 99 ntBASIC2.39□□□□□ -2.03
CLDND1Q9NY35 RNU6-508P-201ENST00000363231 103 ntBASIC2.39□□□□□ -2.03
CLDND1Q9NY35 MIR1287-201ENST00000408492 90 ntBASIC2.39□□□□□ -2.03
CLDND1Q9NY35 RN7SKP200-201ENST00000410564 320 ntBASIC2.39□□□□□ -2.03
CLDND1Q9NY35 RNA5SP501-201ENST00000410990 112 ntBASIC2.39□□□□□ -2.03
CLDND1Q9NY35 RNA5SP270-201ENST00000411361 118 ntBASIC2.39□□□□□ -2.03
CLDND1Q9NY35 AF228730.3-201ENST00000436691 102 ntBASIC2.39□□□□□ -2.03
CLDND1Q9NY35 RNU6-1053P-201ENST00000515930 101 ntBASIC2.39□□□□□ -2.03
CLDND1Q9NY35 RN7SKP179-201ENST00000516126 217 ntBASIC2.39□□□□□ -2.03
CLDND1Q9NY35 SUB1P4-201ENST00000566062 339 ntBASIC2.39□□□□□ -2.03
CLDND1Q9NY35 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.39□□□□□ -2.03
CLDND1Q9NY35 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLDND1Q9NY35 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CLDND1Q9NY35 MTND5P32-201ENST00000560711 1802 ntBASIC2.38□□□□□ -2.03
CLDND1Q9NY35 Y_RNA.114-201ENST00000363265 113 ntBASIC2.38□□□□□ -2.03
CLDND1Q9NY35 RNU6-309P-201ENST00000364573 106 ntBASIC2.38□□□□□ -2.03
CLDND1Q9NY35 Y_RNA.273-201ENST00000364703 102 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms