Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AL606845.1-201ENST00000404881 255 ntBASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 SNORD77.4-201ENST00000516158 81 ntBASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 RNU6-922P-201ENST00000516753 99 ntBASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 AC090142.3-201ENST00000519012 385 ntBASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 CBX3P4-201ENST00000538909 354 ntBASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 MIR4285-201ENST00000581001 85 ntBASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 AL391903.3-201ENST00000612158 163 ntBASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 RNU6-1138P-201ENST00000365359 106 ntBASIC1.59□□□□□ -2.15
LIN7CQ9NUP9 Y_RNA.622-201ENST00000411091 108 ntBASIC1.59□□□□□ -2.15
LIN7CQ9NUP9 SNRPGP14-201ENST00000435400 219 ntBASIC1.59□□□□□ -2.15
LIN7CQ9NUP9 RNA5SP445-201ENST00000515889 115 ntBASIC1.59□□□□□ -2.15
LIN7CQ9NUP9 AC090049.2-201ENST00000550377 109 ntBASIC1.59□□□□□ -2.15
LIN7CQ9NUP9 MIR4308-201ENST00000580634 81 ntBASIC1.59□□□□□ -2.15
LIN7CQ9NUP9 AC012493.3-201ENST00000604494 112 ntBASIC1.59□□□□□ -2.15
LIN7CQ9NUP9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.59□□□□□ -2.15
LIN7CQ9NUP9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.59□□□□□ -2.15
LIN7CQ9NUP9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.59□□□□□ -2.15
LIN7CQ9NUP9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
LIN7CQ9NUP9 MIR411-201ENST00000362239 96 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 SNORD114-1-201ENST00000362705 72 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 RNU6-268P-201ENST00000364174 107 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 Y_RNA.242-201ENST00000364473 110 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 MIR136-201ENST00000385207 82 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 RNU6-1228P-201ENST00000391014 107 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 AL451046.2-201ENST00000403074 277 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 AC019129.1-201ENST00000403786 261 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 RNU2-2P-201ENST00000410396 191 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 RPL31P63-201ENST00000422565 375 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 RNU6-322P-201ENST00000516010 103 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 AL513534.2-201ENST00000603836 250 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 RNU2-4P-201ENST00000606190 192 ntBASIC1.58□□□□□ -2.16
LIN7CQ9NUP9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 Y_RNA.7-201ENST00000362352 102 ntBASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 Y_RNA.274-201ENST00000364714 101 ntBASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 RNY3P5-201ENST00000384127 102 ntBASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 SNORD38C-201ENST00000384381 69 ntBASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 Y_RNA.486-201ENST00000384398 107 ntBASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 RPS27P16-201ENST00000425758 201 ntBASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 AC245517.4-201ENST00000448601 281 ntBASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 AC024614.2-201ENST00000577584 372 ntBASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 MIR4662B-201ENST00000579498 81 ntBASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 MIR5089-201ENST00000580047 84 ntBASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 AC006441.5-201ENST00000612680 209 ntBASIC1.57□□□□□ -2.16
LIN7CQ9NUP9 Y_RNA.238-201ENST00000364441 102 ntBASIC1.56□□□□□ -2.16
LIN7CQ9NUP9 SNRPGP8-201ENST00000454064 226 ntBASIC1.56□□□□□ -2.16
LIN7CQ9NUP9 RNU6-561P-201ENST00000516222 102 ntBASIC1.56□□□□□ -2.16
LIN7CQ9NUP9 RNU6-103P-201ENST00000363686 107 ntBASIC1.55□□□□□ -2.16
LIN7CQ9NUP9 RNU6-47P-201ENST00000383866 107 ntBASIC1.55□□□□□ -2.16
LIN7CQ9NUP9 SNORD41-201ENST00000386967 70 ntBASIC1.55□□□□□ -2.16
LIN7CQ9NUP9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.55□□□□□ -2.16
LIN7CQ9NUP9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.55□□□□□ -2.16
LIN7CQ9NUP9 Y_RNA.666-201ENST00000516187 112 ntBASIC1.55□□□□□ -2.16
LIN7CQ9NUP9 RNU6-1299P-201ENST00000516316 100 ntBASIC1.55□□□□□ -2.16
LIN7CQ9NUP9 RNU6-902P-201ENST00000517212 91 ntBASIC1.55□□□□□ -2.16
LIN7CQ9NUP9 MIR4744-201ENST00000581563 82 ntBASIC1.55□□□□□ -2.16
LIN7CQ9NUP9 AL121890.5-201ENST00000620848 304 ntBASIC1.55□□□□□ -2.16
LIN7CQ9NUP9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.55□□□□□ -2.16
LIN7CQ9NUP9 SNORD45.3-201ENST00000363836 72 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 Y_RNA.257-201ENST00000364596 102 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 SNORA16.1-201ENST00000364597 132 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 Y_RNA.297-201ENST00000364950 91 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 RNU6-484P-201ENST00000384016 107 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 Y_RNA.432-201ENST00000384087 111 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 RNU4-70P-201ENST00000384579 139 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 Y_RNA.571-201ENST00000384753 98 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 RNU2-55P-201ENST00000411146 174 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 RNA5SP182-201ENST00000516064 82 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 SNORA18.7-201ENST00000516910 131 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 RNU6-250P-201ENST00000516958 103 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 MIR3618-201ENST00000580330 88 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 Z83818.1-201ENST00000603584 150 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 GHRLOS.1-201ENST00000610995 70 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 AC015726.2-201ENST00000620112 122 ntBASIC1.54□□□□□ -2.16
LIN7CQ9NUP9 RNU6-728P-201ENST00000365375 104 ntBASIC1.53□□□□□ -2.16
LIN7CQ9NUP9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.53□□□□□ -2.16
LIN7CQ9NUP9 RNU6-578P-201ENST00000390980 103 ntBASIC1.53□□□□□ -2.16
LIN7CQ9NUP9 RNU6-918P-201ENST00000391219 106 ntBASIC1.53□□□□□ -2.16
LIN7CQ9NUP9 RNU2-70P-201ENST00000410718 179 ntBASIC1.53□□□□□ -2.16
LIN7CQ9NUP9 UBL5P3-201ENST00000475112 231 ntBASIC1.53□□□□□ -2.16
LIN7CQ9NUP9 Y_RNA.797-201ENST00000515977 94 ntBASIC1.53□□□□□ -2.16
LIN7CQ9NUP9 RNU6-365P-201ENST00000517113 106 ntBASIC1.53□□□□□ -2.16
LIN7CQ9NUP9 AL512310.8-201ENST00000550183 120 ntBASIC1.53□□□□□ -2.16
LIN7CQ9NUP9 MIR3122-201ENST00000577243 73 ntBASIC1.53□□□□□ -2.16
LIN7CQ9NUP9 MIR3664-201ENST00000579074 99 ntBASIC1.53□□□□□ -2.16
LIN7CQ9NUP9 AP001485.1-201ENST00000604799 199 ntBASIC1.53□□□□□ -2.16
LIN7CQ9NUP9 AC108706.1-201ENST00000611053 297 ntBASIC1.53□□□□□ -2.16
LIN7CQ9NUP9 AL442644.1-201ENST00000454390 3105 ntBASIC1.53□□□□□ -2.17
LIN7CQ9NUP9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 Y_RNA.91-201ENST00000363042 107 ntBASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 Y_RNA.121-201ENST00000363309 113 ntBASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 RNU6-1020P-201ENST00000363684 107 ntBASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 Y_RNA.182-201ENST00000363880 111 ntBASIC1.52□□□□□ -2.17
LIN7CQ9NUP9 RNU6-200P-201ENST00000364743 107 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms