Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 MIR548H3-201ENST00000408771 118 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.590-201ENST00000410140 107 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 RNU6-383P-201ENST00000410864 94 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 MIR3664-201ENST00000579074 99 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 AC008507.4-201ENST00000585464 127 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 AP001485.1-201ENST00000604799 199 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 BX248123.2-201ENST00000606318 124 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 AL021707.8-201ENST00000609428 183 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 RNU6-442P-201ENST00000383968 104 ntBASIC1.41□□□□□ -2.18
SLC6A13Q9NSD5 RNU6-196P-201ENST00000384315 107 ntBASIC1.41□□□□□ -2.18
SLC6A13Q9NSD5 MIR802-201ENST00000390235 94 ntBASIC1.41□□□□□ -2.18
SLC6A13Q9NSD5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SLC6A13Q9NSD5 AL603910.2-201ENST00000407268 136 ntBASIC1.41□□□□□ -2.18
SLC6A13Q9NSD5 AC023449.1-201ENST00000454464 154 ntBASIC1.41□□□□□ -2.18
SLC6A13Q9NSD5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.41□□□□□ -2.18
SLC6A13Q9NSD5 MIR4498-201ENST00000577599 66 ntBASIC1.41□□□□□ -2.18
SLC6A13Q9NSD5 MIR4282-201ENST00000583613 67 ntBASIC1.41□□□□□ -2.18
SLC6A13Q9NSD5 FAM106DP-201ENST00000586416 501 ntBASIC1.41□□□□□ -2.18
SLC6A13Q9NSD5 AL162730.1-201ENST00000605734 292 ntBASIC1.41□□□□□ -2.18
SLC6A13Q9NSD5 U4.1-201ENST00000620349 87 ntBASIC1.41□□□□□ -2.18
SLC6A13Q9NSD5 MIR378A-201ENST00000362177 66 ntBASIC1.4□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.164-201ENST00000363709 102 ntBASIC1.4□□□□□ -2.19
SLC6A13Q9NSD5 SNORA8.3-201ENST00000384679 139 ntBASIC1.4□□□□□ -2.19
SLC6A13Q9NSD5 MIR15B-201ENST00000385045 98 ntBASIC1.4□□□□□ -2.19
SLC6A13Q9NSD5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.4□□□□□ -2.19
SLC6A13Q9NSD5 RNU6-651P-201ENST00000411040 105 ntBASIC1.4□□□□□ -2.19
SLC6A13Q9NSD5 RNU6-1132P-201ENST00000459214 107 ntBASIC1.4□□□□□ -2.19
SLC6A13Q9NSD5 RNU6-1053P-201ENST00000515930 101 ntBASIC1.4□□□□□ -2.19
SLC6A13Q9NSD5 AC090142.3-201ENST00000519012 385 ntBASIC1.4□□□□□ -2.19
SLC6A13Q9NSD5 AC006006.1-201ENST00000603082 144 ntBASIC1.4□□□□□ -2.19
SLC6A13Q9NSD5 AL357312.1-201ENST00000603879 298 ntBASIC1.4□□□□□ -2.19
SLC6A13Q9NSD5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SLC6A13Q9NSD5 AL442644.1-201ENST00000454390 3105 ntBASIC1.39□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.4-201ENST00000362333 112 ntBASIC1.39□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.122-201ENST00000363331 96 ntBASIC1.39□□□□□ -2.19
SLC6A13Q9NSD5 MIR136-201ENST00000385207 82 ntBASIC1.39□□□□□ -2.19
SLC6A13Q9NSD5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.39□□□□□ -2.19
SLC6A13Q9NSD5 AC015922.2-201ENST00000435593 184 ntBASIC1.39□□□□□ -2.19
SLC6A13Q9NSD5 AC023790.1-201ENST00000482174 347 ntBASIC1.39□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.679-201ENST00000516416 91 ntBASIC1.39□□□□□ -2.19
SLC6A13Q9NSD5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.39□□□□□ -2.19
SLC6A13Q9NSD5 AC100767.1-201ENST00000528178 123 ntBASIC1.39□□□□□ -2.19
SLC6A13Q9NSD5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.54-201ENST00000362766 105 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 RNU4-10P-201ENST00000364383 140 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.238-201ENST00000364441 102 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 RN7SKP88-201ENST00000516847 250 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 CYP3A52P-201ENST00000563326 91 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 MIR4503-201ENST00000582187 83 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 BX284668.6-201ENST00000606899 438 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 snoU13.31-201ENST00000607291 104 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 AC062037.2-201ENST00000610137 73 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 7SK.8-201ENST00000612110 250 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 7SK.11-201ENST00000615477 250 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 uc_338.4-201ENST00000616635 176 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 7SK.10-201ENST00000621414 298 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 7SK.13-201ENST00000622040 250 ntBASIC1.38□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.277-201ENST00000364754 102 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 RNU6-702P-201ENST00000364982 107 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.350-201ENST00000365409 98 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.416-201ENST00000384014 113 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.452-201ENST00000384202 108 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 MIR626-201ENST00000385032 94 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 MIR516B2-201ENST00000385190 85 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 SNORD72-201ENST00000390994 80 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 BTF3P4-201ENST00000418852 495 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 SNRPGP14-201ENST00000435400 219 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 RNU6-165P-201ENST00000517170 99 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 AL160236.1-201ENST00000556317 195 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 MIR4643-201ENST00000577473 78 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 AL645939.4-201ENST00000604495 135 ntBASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SLC6A13Q9NSD5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.304-201ENST00000365011 112 ntBASIC1.36□□□□□ -2.19
SLC6A13Q9NSD5 RNU6-463P-201ENST00000384340 107 ntBASIC1.36□□□□□ -2.19
SLC6A13Q9NSD5 SNORD38C-201ENST00000384381 69 ntBASIC1.36□□□□□ -2.19
SLC6A13Q9NSD5 SNORA67.5-201ENST00000391036 107 ntBASIC1.36□□□□□ -2.19
SLC6A13Q9NSD5 RNU4-62P-201ENST00000410125 130 ntBASIC1.36□□□□□ -2.19
SLC6A13Q9NSD5 RPS29P29-201ENST00000456396 171 ntBASIC1.36□□□□□ -2.19
SLC6A13Q9NSD5 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
SLC6A13Q9NSD5 RNU7-149P-201ENST00000516739 59 ntBASIC1.36□□□□□ -2.19
SLC6A13Q9NSD5 MIR4303-201ENST00000581299 66 ntBASIC1.36□□□□□ -2.19
SLC6A13Q9NSD5 AL049861.1-201ENST00000603130 150 ntBASIC1.36□□□□□ -2.19
SLC6A13Q9NSD5 AL442067.1-201ENST00000613261 223 ntBASIC1.36□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.144-201ENST00000363521 113 ntBASIC1.35□□□□□ -2.19
SLC6A13Q9NSD5 Y_RNA.193-201ENST00000363979 102 ntBASIC1.35□□□□□ -2.19
SLC6A13Q9NSD5 RNU1-42P-201ENST00000364033 160 ntBASIC1.35□□□□□ -2.19
SLC6A13Q9NSD5 RNU6-268P-201ENST00000364174 107 ntBASIC1.35□□□□□ -2.19
SLC6A13Q9NSD5 RNU6-1138P-201ENST00000365359 106 ntBASIC1.35□□□□□ -2.19
SLC6A13Q9NSD5 MIR517C-201ENST00000385103 95 ntBASIC1.35□□□□□ -2.19
SLC6A13Q9NSD5 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
SLC6A13Q9NSD5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.35□□□□□ -2.19
SLC6A13Q9NSD5 AC245047.8-201ENST00000456455 284 ntBASIC1.35□□□□□ -2.19
SLC6A13Q9NSD5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.35□□□□□ -2.19
SLC6A13Q9NSD5 SNORD111.1-201ENST00000516421 86 ntBASIC1.35□□□□□ -2.19
SLC6A13Q9NSD5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 209.8 ms