Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MIR4778-201ENST00000577635 80 ntBASIC1.56□□□□□ -2.16
PCDH9Q9HC56 SNORD3E-202ENST00000627253 216 ntBASIC1.56□□□□□ -2.16
PCDH9Q9HC56 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.56□□□□□ -2.16
PCDH9Q9HC56 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PCDH9Q9HC56 MIR411-201ENST00000362239 96 ntBASIC1.55□□□□□ -2.16
PCDH9Q9HC56 RNU4-17P-201ENST00000365598 141 ntBASIC1.55□□□□□ -2.16
PCDH9Q9HC56 MIR1267-201ENST00000408723 78 ntBASIC1.55□□□□□ -2.16
PCDH9Q9HC56 FTH1P12-201ENST00000432137 551 ntBASIC1.55□□□□□ -2.16
PCDH9Q9HC56 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.55□□□□□ -2.16
PCDH9Q9HC56 PGBD4P5-201ENST00000445958 426 ntBASIC1.55□□□□□ -2.16
PCDH9Q9HC56 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.55□□□□□ -2.16
PCDH9Q9HC56 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
PCDH9Q9HC56 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.55□□□□□ -2.16
PCDH9Q9HC56 AC114811.1-201ENST00000507207 168 ntBASIC1.55□□□□□ -2.16
PCDH9Q9HC56 RNU6-138P-201ENST00000515952 107 ntBASIC1.55□□□□□ -2.16
PCDH9Q9HC56 RNU6-1007P-201ENST00000516586 107 ntBASIC1.55□□□□□ -2.16
PCDH9Q9HC56 Y_RNA.714-201ENST00000517065 90 ntBASIC1.55□□□□□ -2.16
PCDH9Q9HC56 SUMO2P16-201ENST00000519475 264 ntBASIC1.55□□□□□ -2.16
PCDH9Q9HC56 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.55□□□□□ -2.16
PCDH9Q9HC56 SNORD53B-201ENST00000577887 78 ntBASIC1.55□□□□□ -2.16
PCDH9Q9HC56 MIR8074-201ENST00000615081 81 ntBASIC1.55□□□□□ -2.16
PCDH9Q9HC56 RNU6-661P-201ENST00000362409 107 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 SNORD50B-201ENST00000364995 70 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 MIR194-1-201ENST00000384892 85 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 MIR802-201ENST00000390235 94 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 SNORA67.5-201ENST00000391036 107 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 RNA5SP496-201ENST00000391240 109 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 MIR1323-201ENST00000408090 73 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 RNU6-847P-201ENST00000411115 108 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 AL161935.2-201ENST00000414627 60 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 JTBP1-201ENST00000441314 247 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 COX6CP14-201ENST00000469580 174 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 NDUFA4P2-201ENST00000489989 244 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 SCARNA8-201ENST00000515924 131 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 MIR4308-201ENST00000580634 81 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 AC120024.3-201ENST00000603167 156 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 RNU2-4P-201ENST00000606190 192 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 WWP1P1-201ENST00000466609 2769 ntBASIC1.54□□□□□ -2.16
PCDH9Q9HC56 MIRLET7C-201ENST00000362160 84 ntBASIC1.53□□□□□ -2.16
PCDH9Q9HC56 RNU6-200P-201ENST00000364743 107 ntBASIC1.53□□□□□ -2.16
PCDH9Q9HC56 RNU6-47P-201ENST00000383866 107 ntBASIC1.53□□□□□ -2.16
PCDH9Q9HC56 RNU6-424P-201ENST00000384367 105 ntBASIC1.53□□□□□ -2.16
PCDH9Q9HC56 MIR30A-201ENST00000385092 71 ntBASIC1.53□□□□□ -2.16
PCDH9Q9HC56 AC004965.1-201ENST00000413033 213 ntBASIC1.53□□□□□ -2.16
PCDH9Q9HC56 SNORD11-201ENST00000459124 84 ntBASIC1.53□□□□□ -2.16
PCDH9Q9HC56 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.53□□□□□ -2.16
PCDH9Q9HC56 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.53□□□□□ -2.16
PCDH9Q9HC56 SNORD45.4-201ENST00000516629 73 ntBASIC1.53□□□□□ -2.16
PCDH9Q9HC56 uc_338.4-201ENST00000616635 176 ntBASIC1.53□□□□□ -2.16
PCDH9Q9HC56 AL353997.5-201ENST00000618886 171 ntBASIC1.53□□□□□ -2.16
PCDH9Q9HC56 AC106754.2-201ENST00000623006 233 ntBASIC1.53□□□□□ -2.16
PCDH9Q9HC56 RNU6-60P-201ENST00000364792 103 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 snoU2-30.1-201ENST00000365012 70 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 RNA5SP259-201ENST00000365541 109 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 SNORD72-201ENST00000390994 80 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 RNU6-482P-201ENST00000391068 107 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 SNORA67.6-201ENST00000391093 99 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 RNU6-381P-201ENST00000391259 108 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 AL606845.1-201ENST00000404881 255 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 Y_RNA.622-201ENST00000411091 108 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 AC005908.1-201ENST00000468701 347 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 AC022559.1-201ENST00000520905 205 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.52□□□□□ -2.17
PCDH9Q9HC56 MIR5688-201ENST00000580619 83 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 AL513423.1-201ENST00000621695 132 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 MIR8063-201ENST00000621930 81 ntBASIC1.52□□□□□ -2.17
PCDH9Q9HC56 MIR424-201ENST00000362227 98 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 Y_RNA.7-201ENST00000362352 102 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 RNU6-1020P-201ENST00000363684 107 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 U8.5-201ENST00000364528 136 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 MIR660-201ENST00000385235 97 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 MIR891A-201ENST00000401237 79 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 Y_RNA.793-201ENST00000411222 111 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 AC108059.2-201ENST00000434626 151 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.51□□□□□ -2.17
PCDH9Q9HC56 Y_RNA.644-201ENST00000459006 113 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 CYCTP-201ENST00000504253 315 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 RN7SKP164-201ENST00000516138 266 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 Y_RNA.674-201ENST00000516362 113 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 RNU7-149P-201ENST00000516739 59 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.51□□□□□ -2.17
PCDH9Q9HC56 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
PCDH9Q9HC56 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.51□□□□□ -2.17
PCDH9Q9HC56 SNORA77B-201ENST00000578179 125 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 MIR4762-201ENST00000585261 75 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 AL645939.4-201ENST00000604495 135 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 AL021707.8-201ENST00000609428 183 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 Pinc.1-201ENST00000616452 154 ntBASIC1.51□□□□□ -2.17
PCDH9Q9HC56 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
PCDH9Q9HC56 Y_RNA.182-201ENST00000363880 111 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 RNU6-457P-201ENST00000363999 107 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 SNORD14E-201ENST00000364009 85 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 RNA5SP99-201ENST00000364020 114 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 Y_RNA.238-201ENST00000364441 102 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 RNU4-70P-201ENST00000384579 139 ntBASIC1.5□□□□□ -2.17
PCDH9Q9HC56 Y_RNA.571-201ENST00000384753 98 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms