Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 Y_RNA.797-201ENST00000515977 94 ntBASIC1.91□□□□□ -2.1
USP29Q9HBJ7 Y_RNA.662-201ENST00000516028 97 ntBASIC1.91□□□□□ -2.1
USP29Q9HBJ7 RNU7-28P-201ENST00000516759 62 ntBASIC1.91□□□□□ -2.1
USP29Q9HBJ7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.91□□□□□ -2.1
USP29Q9HBJ7 MIR4299-201ENST00000577899 72 ntBASIC1.91□□□□□ -2.1
USP29Q9HBJ7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
USP29Q9HBJ7 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
USP29Q9HBJ7 uc_338.4-201ENST00000616635 176 ntBASIC1.91□□□□□ -2.1
USP29Q9HBJ7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
USP29Q9HBJ7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
USP29Q9HBJ7 MIR126-201ENST00000362291 85 ntBASIC1.9□□□□□ -2.11
USP29Q9HBJ7 Y_RNA.23-201ENST00000362496 106 ntBASIC1.9□□□□□ -2.11
USP29Q9HBJ7 Y_RNA.441-201ENST00000384123 112 ntBASIC1.9□□□□□ -2.11
USP29Q9HBJ7 Y_RNA.587-201ENST00000391210 103 ntBASIC1.9□□□□□ -2.11
USP29Q9HBJ7 RNA5SP482-201ENST00000391269 118 ntBASIC1.9□□□□□ -2.11
USP29Q9HBJ7 AL445685.2-201ENST00000422551 342 ntBASIC1.9□□□□□ -2.11
USP29Q9HBJ7 FTH1P12-201ENST00000432137 551 ntBASIC1.9□□□□□ -2.11
USP29Q9HBJ7 SNORD77.4-201ENST00000516158 81 ntBASIC1.9□□□□□ -2.11
USP29Q9HBJ7 SNORA31.17-201ENST00000516953 127 ntBASIC1.9□□□□□ -2.11
USP29Q9HBJ7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.9□□□□□ -2.11
USP29Q9HBJ7 AC022254.1-201ENST00000567857 235 ntBASIC1.9□□□□□ -2.11
USP29Q9HBJ7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
USP29Q9HBJ7 MIRLET7C-201ENST00000362160 84 ntBASIC1.89□□□□□ -2.11
USP29Q9HBJ7 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
USP29Q9HBJ7 RNU6-484P-201ENST00000384016 107 ntBASIC1.89□□□□□ -2.11
USP29Q9HBJ7 RN7SKP200-201ENST00000410564 320 ntBASIC1.89□□□□□ -2.11
USP29Q9HBJ7 RNU4-43P-201ENST00000410628 137 ntBASIC1.89□□□□□ -2.11
USP29Q9HBJ7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.89□□□□□ -2.11
USP29Q9HBJ7 STAG3L5P-204ENST00000443759 179 ntBASIC1.89□□□□□ -2.11
USP29Q9HBJ7 JPX_2.1-201ENST00000614161 69 ntBASIC1.89□□□□□ -2.11
USP29Q9HBJ7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
USP29Q9HBJ7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USP29Q9HBJ7 Y_RNA.4-201ENST00000362333 112 ntBASIC1.88□□□□□ -2.11
USP29Q9HBJ7 RNU1-17P-201ENST00000363022 152 ntBASIC1.88□□□□□ -2.11
USP29Q9HBJ7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.88□□□□□ -2.11
USP29Q9HBJ7 RNU6-1138P-201ENST00000365359 106 ntBASIC1.88□□□□□ -2.11
USP29Q9HBJ7 Y_RNA.464-201ENST00000384282 110 ntBASIC1.88□□□□□ -2.11
USP29Q9HBJ7 RNU6-1031P-201ENST00000384773 107 ntBASIC1.88□□□□□ -2.11
USP29Q9HBJ7 RNU6-1135P-201ENST00000411083 103 ntBASIC1.88□□□□□ -2.11
USP29Q9HBJ7 RNU2-55P-201ENST00000411146 174 ntBASIC1.88□□□□□ -2.11
USP29Q9HBJ7 CYCSP49-201ENST00000420810 319 ntBASIC1.88□□□□□ -2.11
USP29Q9HBJ7 AC099513.1-201ENST00000490423 301 ntBASIC1.88□□□□□ -2.11
USP29Q9HBJ7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.88□□□□□ -2.11
USP29Q9HBJ7 RNA5SP481-201ENST00000516814 122 ntBASIC1.88□□□□□ -2.11
USP29Q9HBJ7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.88□□□□□ -2.11
USP29Q9HBJ7 MIR4713-201ENST00000582691 75 ntBASIC1.88□□□□□ -2.11
USP29Q9HBJ7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USP29Q9HBJ7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USP29Q9HBJ7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USP29Q9HBJ7 SNORD68-201ENST00000363214 84 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 SNORD45.3-201ENST00000363836 72 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 SNORD48-201ENST00000364953 64 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 RNU6-950P-201ENST00000384651 107 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 SNORA40.18-201ENST00000391200 128 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 RNU6-394P-201ENST00000410735 107 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 RNU2-7P-201ENST00000410794 178 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 SEPT7P4-201ENST00000437076 306 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 AC003989.2-201ENST00000440224 169 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 RPS29P11-201ENST00000496507 171 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.87□□□□□ -2.11
USP29Q9HBJ7 RNU7-149P-201ENST00000516739 59 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 RNU6-1212P-201ENST00000517023 104 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.87□□□□□ -2.11
USP29Q9HBJ7 MIR3122-201ENST00000577243 73 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 MIR4431-201ENST00000579990 94 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 MIR3683-201ENST00000580847 82 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 AC008507.4-201ENST00000585464 127 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 SNORA28-201ENST00000606769 126 ntBASIC1.87□□□□□ -2.11
USP29Q9HBJ7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.86□□□□□ -2.11
USP29Q9HBJ7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
USP29Q9HBJ7 SNORD50B-201ENST00000364995 70 ntBASIC1.86□□□□□ -2.11
USP29Q9HBJ7 RNU6-728P-201ENST00000365375 104 ntBASIC1.86□□□□□ -2.11
USP29Q9HBJ7 MIR15B-201ENST00000385045 98 ntBASIC1.86□□□□□ -2.11
USP29Q9HBJ7 RNU6-131P-201ENST00000391144 107 ntBASIC1.86□□□□□ -2.11
USP29Q9HBJ7 Y_RNA.622-201ENST00000411091 108 ntBASIC1.86□□□□□ -2.11
USP29Q9HBJ7 MLLT10P1-201ENST00000418346 262 ntBASIC1.86□□□□□ -2.11
USP29Q9HBJ7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.86□□□□□ -2.11
USP29Q9HBJ7 snoU13.27-201ENST00000459278 104 ntBASIC1.86□□□□□ -2.11
USP29Q9HBJ7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.86□□□□□ -2.11
USP29Q9HBJ7 MIR4419B-201ENST00000577260 68 ntBASIC1.86□□□□□ -2.11
USP29Q9HBJ7 AC087685.1-201ENST00000587507 141 ntBASIC1.86□□□□□ -2.11
USP29Q9HBJ7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.86□□□□□ -2.11
USP29Q9HBJ7 RNU4-84P-201ENST00000364200 139 ntBASIC1.85□□□□□ -2.11
USP29Q9HBJ7 RNU6-1062P-201ENST00000383908 107 ntBASIC1.85□□□□□ -2.11
USP29Q9HBJ7 RNU6-424P-201ENST00000384367 105 ntBASIC1.85□□□□□ -2.11
USP29Q9HBJ7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
USP29Q9HBJ7 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
USP29Q9HBJ7 RNU6-360P-201ENST00000390944 104 ntBASIC1.85□□□□□ -2.11
USP29Q9HBJ7 SNORD72-201ENST00000390994 80 ntBASIC1.85□□□□□ -2.11
USP29Q9HBJ7 AL034345.1-201ENST00000407768 123 ntBASIC1.85□□□□□ -2.11
USP29Q9HBJ7 AL121914.1-201ENST00000450188 156 ntBASIC1.85□□□□□ -2.11
USP29Q9HBJ7 AC023449.1-201ENST00000454464 154 ntBASIC1.85□□□□□ -2.11
USP29Q9HBJ7 AC005840.1-201ENST00000498412 377 ntBASIC1.85□□□□□ -2.11
USP29Q9HBJ7 AL160236.1-201ENST00000556317 195 ntBASIC1.85□□□□□ -2.11
USP29Q9HBJ7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.85□□□□□ -2.11
USP29Q9HBJ7 AC021506.2-201ENST00000612354 169 ntBASIC1.85□□□□□ -2.11
USP29Q9HBJ7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
USP29Q9HBJ7 MIR337-201ENST00000362281 93 ntBASIC1.84□□□□□ -2.11
USP29Q9HBJ7 Y_RNA.486-201ENST00000384398 107 ntBASIC1.84□□□□□ -2.11
USP29Q9HBJ7 MIR9-3-201ENST00000385084 90 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms