Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 RNU7-149P-201ENST00000516739 59 ntBASIC2.59□□□□□ -1.99
SEMA4AQ9H3S1 RNA5SP137-201ENST00000516833 135 ntBASIC2.59□□□□□ -1.99
SEMA4AQ9H3S1 MIR3126-201ENST00000577443 74 ntBASIC2.59□□□□□ -1.99
SEMA4AQ9H3S1 WWP1P1-201ENST00000466609 2769 ntBASIC2.59□□□□□ -2
SEMA4AQ9H3S1 MTND5P18-201ENST00000445624 1801 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
SEMA4AQ9H3S1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SEMA4AQ9H3S1 MIR562-201ENST00000384894 95 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 AL603914.1-201ENST00000401964 204 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 MIR1287-201ENST00000408492 90 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 Y_RNA.621-201ENST00000411065 96 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 RPS15AP28-201ENST00000435088 386 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 ATP5J2P3-201ENST00000451550 258 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 HMGN2P23-201ENST00000456759 269 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 RNU7-99P-201ENST00000516271 62 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 RNU6-537P-201ENST00000517277 103 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 AC024995.1-201ENST00000523014 93 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 AC011604.1-201ENST00000545978 196 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 MIR5694-201ENST00000581190 76 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 AL359075.3-201ENST00000613288 217 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 MIR6895-201ENST00000613497 78 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 MIR338-201ENST00000636369 67 ntBASIC2.58□□□□□ -2
SEMA4AQ9H3S1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.58□□□□□ -2
SEMA4AQ9H3S1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.58□□□□□ -2
SEMA4AQ9H3S1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.58□□□□□ -2
SEMA4AQ9H3S1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SEMA4AQ9H3S1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
SEMA4AQ9H3S1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.57□□□□□ -2
SEMA4AQ9H3S1 MIR520G-201ENST00000385064 90 ntBASIC2.57□□□□□ -2
SEMA4AQ9H3S1 CST2P1-201ENST00000425770 87 ntBASIC2.57□□□□□ -2
SEMA4AQ9H3S1 RNA5SP320-201ENST00000516263 124 ntBASIC2.57□□□□□ -2
SEMA4AQ9H3S1 AC007751.1-201ENST00000529260 376 ntBASIC2.57□□□□□ -2
SEMA4AQ9H3S1 AC091178.2-201ENST00000584401 117 ntBASIC2.57□□□□□ -2
SEMA4AQ9H3S1 RNU6-647P-201ENST00000364243 107 ntBASIC2.56□□□□□ -2
SEMA4AQ9H3S1 SNORD114-6-201ENST00000364393 72 ntBASIC2.56□□□□□ -2
SEMA4AQ9H3S1 Y_RNA.309-201ENST00000365046 111 ntBASIC2.56□□□□□ -2
SEMA4AQ9H3S1 RNU1-52P-201ENST00000384190 164 ntBASIC2.56□□□□□ -2
SEMA4AQ9H3S1 RNU1-148P-201ENST00000384472 162 ntBASIC2.56□□□□□ -2
SEMA4AQ9H3S1 SNORA12.1-201ENST00000390873 148 ntBASIC2.56□□□□□ -2
SEMA4AQ9H3S1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.56□□□□□ -2
SEMA4AQ9H3S1 AL031737.1-201ENST00000450125 223 ntBASIC2.56□□□□□ -2
SEMA4AQ9H3S1 RNU6-1270P-201ENST00000517128 108 ntBASIC2.56□□□□□ -2
SEMA4AQ9H3S1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.56□□□□□ -2
SEMA4AQ9H3S1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
SEMA4AQ9H3S1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SEMA4AQ9H3S1 MIR21-201ENST00000362134 72 ntBASIC2.55□□□□□ -2
SEMA4AQ9H3S1 RNA5SP493-201ENST00000364115 91 ntBASIC2.55□□□□□ -2
SEMA4AQ9H3S1 SNORD114-30-201ENST00000364448 72 ntBASIC2.55□□□□□ -2
SEMA4AQ9H3S1 RNU6-880P-201ENST00000384526 107 ntBASIC2.55□□□□□ -2
SEMA4AQ9H3S1 MIRLET7F2-201ENST00000385277 83 ntBASIC2.55□□□□□ -2
SEMA4AQ9H3S1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.55□□□□□ -2
SEMA4AQ9H3S1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.55□□□□□ -2
SEMA4AQ9H3S1 RNU6-1041P-201ENST00000516254 102 ntBASIC2.55□□□□□ -2
SEMA4AQ9H3S1 Y_RNA.677-201ENST00000516401 85 ntBASIC2.55□□□□□ -2
SEMA4AQ9H3S1 RNA5SP153-201ENST00000516498 76 ntBASIC2.55□□□□□ -2
SEMA4AQ9H3S1 RNU1-142P-201ENST00000516682 145 ntBASIC2.55□□□□□ -2
SEMA4AQ9H3S1 AC007336.1-201ENST00000576365 3828 ntBASIC2.55□□□□□ -2
SEMA4AQ9H3S1 MIR4658-201ENST00000584344 65 ntBASIC2.55□□□□□ -2
SEMA4AQ9H3S1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
SEMA4AQ9H3S1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.54□□□□□ -2
SEMA4AQ9H3S1 Y_RNA.66-201ENST00000362862 102 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 RNU6-23P-201ENST00000363283 107 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 RNA5SP456-201ENST00000364002 114 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 RNU1-91P-201ENST00000364746 163 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 RNU6-106P-201ENST00000384405 107 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 Y_RNA.549-201ENST00000384657 102 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 SNORD72-201ENST00000390994 80 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 AL359511.1-201ENST00000402970 211 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 RNU6-1186P-201ENST00000410429 97 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 AL021397.1-201ENST00000451806 248 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 AC023449.1-201ENST00000454464 154 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 AC233266.1-201ENST00000454518 96 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.54□□□□□ -2
SEMA4AQ9H3S1 RNU7-94P-201ENST00000459576 63 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 NDUFA4P2-201ENST00000489989 244 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 AC108729.3-201ENST00000513484 108 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.54□□□□□ -2
SEMA4AQ9H3S1 MIR2681-201ENST00000581814 105 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 AP000942.3-201ENST00000603702 160 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 AC242852.1-201ENST00000612151 96 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 AC244015.1-201ENST00000622301 99 ntBASIC2.54□□□□□ -2
SEMA4AQ9H3S1 RNU1-58P-201ENST00000362413 163 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 RNU6-32P-201ENST00000383948 107 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 RNU6-13P-201ENST00000384248 107 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 SNORA51.10-201ENST00000384418 136 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 Y_RNA.528-201ENST00000384575 108 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 RNU6-12P-201ENST00000384604 107 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 RNU6-41P-201ENST00000384741 107 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 MIR891A-201ENST00000401237 79 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 AL117342.1-201ENST00000404861 406 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 SNORA11.4-201ENST00000408823 129 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 RNU6-554P-201ENST00000410466 106 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 RNA5SP127-201ENST00000411051 133 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 HMGN2P32-201ENST00000444648 269 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 OR9P1P-201ENST00000496431 281 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 MRPS17P9-201ENST00000511924 393 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 RNU6-1053P-201ENST00000515930 101 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 RNU6-1291P-201ENST00000516591 104 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 RNU6-1096P-201ENST00000517089 102 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms