Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 Y_RNA.49-201ENST00000362714 112 ntBASIC2.48□□□□□ -2.01
VPS11Q9H270 RNU6-1240P-201ENST00000365155 104 ntBASIC2.48□□□□□ -2.01
VPS11Q9H270 AL049873.1-201ENST00000480540 376 ntBASIC2.48□□□□□ -2.01
VPS11Q9H270 RNU6-970P-201ENST00000516312 107 ntBASIC2.48□□□□□ -2.01
VPS11Q9H270 RNU7-172P-201ENST00000517125 64 ntBASIC2.48□□□□□ -2.01
VPS11Q9H270 AC121758.2-201ENST00000553271 193 ntBASIC2.48□□□□□ -2.01
VPS11Q9H270 MIR5009-201ENST00000578736 100 ntBASIC2.48□□□□□ -2.01
VPS11Q9H270 MIR4438-201ENST00000585271 93 ntBASIC2.48□□□□□ -2.01
VPS11Q9H270 MALAT1.1-201ENST00000618249 95 ntBASIC2.48□□□□□ -2.01
VPS11Q9H270 AC009487.4-201ENST00000624969 3585 ntBASIC2.48□□□□□ -2.01
VPS11Q9H270 RNU1-58P-201ENST00000362413 163 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 Y_RNA.198-201ENST00000364013 98 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 RNU6-1113P-201ENST00000384348 107 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 MIR634-201ENST00000385208 97 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 RNA5SP465-201ENST00000391195 109 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 RN7SKP132-201ENST00000516001 208 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 Y_RNA.666-201ENST00000516187 112 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 RNU6-904P-201ENST00000516206 101 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 RNU6-948P-201ENST00000516374 107 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 Y_RNA.685-201ENST00000516532 108 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 RNY4P20-201ENST00000516678 93 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 RNU6-126P-201ENST00000516685 103 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 RNU6-158P-201ENST00000517104 100 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 AC007336.1-201ENST00000576365 3828 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 AC078899.2-201ENST00000595282 212 ntBASIC2.47□□□□□ -2.01
VPS11Q9H270 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.46□□□□□ -2.01
VPS11Q9H270 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS11Q9H270 MIR494-201ENST00000349529 81 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 MIR21-201ENST00000362134 72 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 RNU6-859P-201ENST00000362728 107 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 RNY1P10-201ENST00000363268 113 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 Y_RNA.220-201ENST00000364244 109 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 RNU1-51P-201ENST00000365345 176 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 Y_RNA.342-201ENST00000365352 113 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 Y_RNA.344-201ENST00000365381 112 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 SNORD24-201ENST00000383884 75 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 MIR518F-201ENST00000384973 87 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 AL109933.2-201ENST00000452651 260 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 SNORD109B-201ENST00000458961 67 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 SNORD109A-201ENST00000459128 67 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 RNU6-1096P-201ENST00000517089 102 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 AC068339.1-201ENST00000526965 141 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 MIR5694-201ENST00000581190 76 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS11Q9H270 MIR7106-201ENST00000612419 65 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 JPX_2.1-201ENST00000614161 69 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 Y_RNA.818-201ENST00000618813 71 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 AC134878.1-201ENST00000619901 243 ntBASIC2.46□□□□□ -2.02
VPS11Q9H270 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VPS11Q9H270 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VPS11Q9H270 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS11Q9H270 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS11Q9H270 SNORA80A-201ENST00000363922 136 ntBASIC2.45□□□□□ -2.02
VPS11Q9H270 SNORA80E-201ENST00000384744 137 ntBASIC2.45□□□□□ -2.02
VPS11Q9H270 MIR450A2-201ENST00000385022 100 ntBASIC2.45□□□□□ -2.02
VPS11Q9H270 SNORD78.1-201ENST00000390866 65 ntBASIC2.45□□□□□ -2.02
VPS11Q9H270 AC008134.1-201ENST00000420943 193 ntBASIC2.45□□□□□ -2.02
VPS11Q9H270 BX510359.4-201ENST00000423750 193 ntBASIC2.45□□□□□ -2.02
VPS11Q9H270 AC107083.1-201ENST00000439643 279 ntBASIC2.45□□□□□ -2.02
VPS11Q9H270 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS11Q9H270 RPS26P48-201ENST00000491713 339 ntBASIC2.45□□□□□ -2.02
VPS11Q9H270 RNU2-19P-201ENST00000517288 84 ntBASIC2.45□□□□□ -2.02
VPS11Q9H270 AC008507.4-201ENST00000585464 127 ntBASIC2.45□□□□□ -2.02
VPS11Q9H270 SNORD115-40-201ENST00000606510 82 ntBASIC2.45□□□□□ -2.02
VPS11Q9H270 SCARNA15.3-201ENST00000626315 122 ntBASIC2.45□□□□□ -2.02
VPS11Q9H270 SCARNA4.1-201ENST00000628597 123 ntBASIC2.45□□□□□ -2.02
VPS11Q9H270 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS11Q9H270 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS11Q9H270 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
VPS11Q9H270 Y_RNA.78-201ENST00000362970 110 ntBASIC2.44□□□□□ -2.02
VPS11Q9H270 RNU6-23P-201ENST00000363283 107 ntBASIC2.44□□□□□ -2.02
VPS11Q9H270 RNA5SP493-201ENST00000364115 91 ntBASIC2.44□□□□□ -2.02
VPS11Q9H270 SNORD114-6-201ENST00000364393 72 ntBASIC2.44□□□□□ -2.02
VPS11Q9H270 Y_RNA.253-201ENST00000364562 112 ntBASIC2.44□□□□□ -2.02
VPS11Q9H270 SNORA6-201ENST00000384033 151 ntBASIC2.44□□□□□ -2.02
VPS11Q9H270 MIR1283-2-201ENST00000408621 87 ntBASIC2.44□□□□□ -2.02
VPS11Q9H270 RNA5SP57-201ENST00000459463 123 ntBASIC2.44□□□□□ -2.02
VPS11Q9H270 AC055731.1-201ENST00000474387 401 ntBASIC2.44□□□□□ -2.02
VPS11Q9H270 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS11Q9H270 RNU6-856P-201ENST00000516959 98 ntBASIC2.44□□□□□ -2.02
VPS11Q9H270 MIR3169-201ENST00000578032 83 ntBASIC2.44□□□□□ -2.02
VPS11Q9H270 MIR5197-201ENST00000583721 112 ntBASIC2.44□□□□□ -2.02
VPS11Q9H270 ELOCP29-201ENST00000588193 334 ntBASIC2.44□□□□□ -2.02
VPS11Q9H270 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS11Q9H270 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS11Q9H270 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS11Q9H270 AC005336.3-201ENST00000623833 2679 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 RNU6-349P-201ENST00000362402 107 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 RNU6-414P-201ENST00000363705 104 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 SNORA5B-201ENST00000363786 132 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 RNU6-820P-201ENST00000384273 107 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 Y_RNA.466-201ENST00000384294 113 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 RNU6-1104P-201ENST00000384723 104 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 RNU11-3P-201ENST00000391111 133 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 Y_RNA.593-201ENST00000410292 98 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 RPS3AP1-201ENST00000413190 320 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 AL513328.1-201ENST00000446460 224 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 RNU6-693P-201ENST00000516134 107 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 RNU7-128P-201ENST00000517247 62 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms