Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CDT1Q9H211 AC018630.2-201ENST00000534866 2403 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 Y_RNA.23-201ENST00000362496 106 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 RNY1P10-201ENST00000363268 113 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 RNU6-112P-201ENST00000363599 104 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 RNU6-674P-201ENST00000363831 107 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 RNU4-13P-201ENST00000364019 141 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 SNORA72-201ENST00000384339 132 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 MIR499A-201ENST00000384903 122 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 RNA5SP109-201ENST00000391010 116 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 Y_RNA.622-201ENST00000411091 108 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 AC244636.1-201ENST00000421152 228 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 RNU6-1291P-201ENST00000516591 104 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 RNU6-1096P-201ENST00000517089 102 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 AC011604.1-201ENST00000545978 196 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 AL021707.8-201ENST00000609428 183 ntBASIC1.85□□□□□ -2.11
CDT1Q9H211 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.11
CDT1Q9H211 MIR367-201ENST00000362299 68 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 RNU6-1209P-201ENST00000363655 107 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 SNORD116-18-201ENST00000383961 92 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 RNU6-296P-201ENST00000384608 107 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 MIR518E-201ENST00000385252 88 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 Y_RNA.580-201ENST00000391004 95 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 Y_RNA.587-201ENST00000391210 103 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 RNA5SP445-201ENST00000515889 115 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 RNU7-121P-201ENST00000516604 62 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 Y_RNA.703-201ENST00000516846 111 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 RNU7-116P-201ENST00000516940 62 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 MIR3618-201ENST00000580330 88 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 MIR3910-1-201ENST00000580936 111 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 AL049861.1-201ENST00000603130 150 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 AC022217.4-201ENST00000604389 163 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 MIR6079-201ENST00000635807 62 ntBASIC1.84□□□□□ -2.11
CDT1Q9H211 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CDT1Q9H211 Y_RNA.203-201ENST00000364106 102 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 Y_RNA.355-201ENST00000365462 98 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 MIR520A-201ENST00000384862 85 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 RNU6-1228P-201ENST00000391014 107 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 AL121914.1-201ENST00000450188 156 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 RPS27P1-201ENST00000450552 247 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 AC233266.1-201ENST00000454518 96 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 RNU6-406P-201ENST00000516470 107 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 SNORD116-25-201ENST00000516517 92 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 RNA5SP437-201ENST00000517249 129 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 RPL23AP91-201ENST00000569211 455 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.83□□□□□ -2.12
CDT1Q9H211 MIR502-201ENST00000606349 86 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 AC242852.1-201ENST00000612151 96 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 AC244015.1-201ENST00000622301 99 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 U2.22-201ENST00000636441 106 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.83□□□□□ -2.12
CDT1Q9H211 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.83□□□□□ -2.12
CDT1Q9H211 RNU6-103P-201ENST00000363686 107 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 SNORA63D-201ENST00000364359 132 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 RNU4-41P-201ENST00000364426 143 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 Y_RNA.267-201ENST00000364679 109 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 SNORA25.9-201ENST00000365087 128 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 RNU6-1336P-201ENST00000383886 109 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 RNU6-131P-201ENST00000391144 107 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 SNORA17.3-201ENST00000391159 129 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 RNU2-7P-201ENST00000410794 178 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 RN7SKP101-201ENST00000411376 320 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.82□□□□□ -2.12
CDT1Q9H211 AC108667.1-201ENST00000428618 249 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 AL392103.1-201ENST00000447000 198 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 MIR4431-201ENST00000579990 94 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 MIR5688-201ENST00000580619 83 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 AL391903.3-201ENST00000612158 163 ntBASIC1.82□□□□□ -2.12
CDT1Q9H211 AC100821.1-201ENST00000523153 2479 ntBASIC1.81□□□□□ -2.12
CDT1Q9H211 MIR378A-201ENST00000362177 66 ntBASIC1.81□□□□□ -2.12
CDT1Q9H211 RNU6-151P-201ENST00000364158 107 ntBASIC1.81□□□□□ -2.12
CDT1Q9H211 RNY1P5-201ENST00000383890 115 ntBASIC1.81□□□□□ -2.12
CDT1Q9H211 MIR15B-201ENST00000385045 98 ntBASIC1.81□□□□□ -2.12
CDT1Q9H211 RNU6-239P-201ENST00000390990 99 ntBASIC1.81□□□□□ -2.12
CDT1Q9H211 AC006461.1-201ENST00000412637 326 ntBASIC1.81□□□□□ -2.12
CDT1Q9H211 AC069257.2-201ENST00000441819 155 ntBASIC1.81□□□□□ -2.12
CDT1Q9H211 SNORD11-201ENST00000459124 84 ntBASIC1.81□□□□□ -2.12
CDT1Q9H211 NDUFA4P2-201ENST00000489989 244 ntBASIC1.81□□□□□ -2.12
CDT1Q9H211 SNORA31.17-201ENST00000516953 127 ntBASIC1.81□□□□□ -2.12
CDT1Q9H211 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CDT1Q9H211 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
CDT1Q9H211 SNORD45.3-201ENST00000363836 72 ntBASIC1.8□□□□□ -2.12
CDT1Q9H211 SNORA4.2-201ENST00000365313 147 ntBASIC1.8□□□□□ -2.12
CDT1Q9H211 Y_RNA.357-201ENST00000365487 109 ntBASIC1.8□□□□□ -2.12
CDT1Q9H211 RNU6-449P-201ENST00000383914 107 ntBASIC1.8□□□□□ -2.12
CDT1Q9H211 AC245047.3-201ENST00000429428 127 ntBASIC1.8□□□□□ -2.12
CDT1Q9H211 RNU7-94P-201ENST00000459576 63 ntBASIC1.8□□□□□ -2.12
CDT1Q9H211 RNU6-341P-201ENST00000516973 96 ntBASIC1.8□□□□□ -2.12
CDT1Q9H211 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.8□□□□□ -2.12
CDT1Q9H211 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
CDT1Q9H211 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CDT1Q9H211 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CDT1Q9H211 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CDT1Q9H211 SNORA1B-201ENST00000362535 133 ntBASIC1.79□□□□□ -2.12
CDT1Q9H211 RNU6-484P-201ENST00000384016 107 ntBASIC1.79□□□□□ -2.12
CDT1Q9H211 SNORA19-201ENST00000384737 128 ntBASIC1.79□□□□□ -2.12
CDT1Q9H211 MIR520G-201ENST00000385064 90 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms