Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
UBE2OQ9C0C9 AC073325.2-201ENST00000339545 159 ntBASIC3.16□□□□□ -1.9
UBE2OQ9C0C9 SNORA68.1-201ENST00000364537 132 ntBASIC3.16□□□□□ -1.9
UBE2OQ9C0C9 Y_RNA.342-201ENST00000365352 113 ntBASIC3.16□□□□□ -1.9
UBE2OQ9C0C9 RNU6-573P-201ENST00000383938 106 ntBASIC3.16□□□□□ -1.9
UBE2OQ9C0C9 AC099677.2-201ENST00000436385 175 ntBASIC3.16□□□□□ -1.9
UBE2OQ9C0C9 CKS1BP2-201ENST00000497342 240 ntBASIC3.16□□□□□ -1.9
UBE2OQ9C0C9 RNA5SP148-201ENST00000516527 94 ntBASIC3.16□□□□□ -1.9
UBE2OQ9C0C9 RNU6-548P-201ENST00000517083 115 ntBASIC3.16□□□□□ -1.9
UBE2OQ9C0C9 AC002984.1-201ENST00000591692 448 ntBASIC3.16□□□□□ -1.9
UBE2OQ9C0C9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBE2OQ9C0C9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.16□□□□□ -1.9
UBE2OQ9C0C9 Y_RNA.93-201ENST00000363066 109 ntBASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 RNU1-133P-201ENST00000364867 167 ntBASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 SNORA9.2-201ENST00000365361 133 ntBASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 SNORA67.4-201ENST00000384688 142 ntBASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 SNORA46-201ENST00000384762 135 ntBASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 MIR450A2-201ENST00000385022 100 ntBASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 AL445646.1-201ENST00000431784 216 ntBASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 AL591806.2-201ENST00000433122 173 ntBASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 AC018868.1-201ENST00000491307 315 ntBASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 MIR3163-201ENST00000581592 73 ntBASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 AL162726.3-218ENST00000636401 95 ntBASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBE2OQ9C0C9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 SNORD68-201ENST00000363214 84 ntBASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 SNORD14E-201ENST00000364009 85 ntBASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 RNA5SP139-201ENST00000364340 117 ntBASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 Y_RNA.466-201ENST00000384294 113 ntBASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 RN7SKP192-201ENST00000411291 327 ntBASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 AC107297.1-201ENST00000459991 176 ntBASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 RN7SL20P-201ENST00000488827 297 ntBASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 RNU2-35P-201ENST00000516446 142 ntBASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 RNU7-70P-201ENST00000516941 66 ntBASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 MIR4305-201ENST00000583252 102 ntBASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.14□□□□□ -1.91
UBE2OQ9C0C9 Y_RNA.107-201ENST00000363190 121 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 SNORD114-6-201ENST00000364393 72 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 Y_RNA.265-201ENST00000364677 108 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 CD24P4-201ENST00000382840 243 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 SNORA8-201ENST00000384574 139 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 RNU6-1152P-201ENST00000384576 107 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 MIR9-1-201ENST00000385198 89 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 MIR764-201ENST00000390811 85 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 RNA5SP323-201ENST00000391094 133 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 RNU1-101P-201ENST00000391171 127 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 RNU7-94P-201ENST00000459576 63 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 SEM1P1-201ENST00000506694 209 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 RNU6-667P-201ENST00000517186 102 ntBASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.13□□□□□ -1.91
UBE2OQ9C0C9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 RNU6-820P-201ENST00000384273 107 ntBASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 RNA5SP274-201ENST00000410484 108 ntBASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 RPL39P25-201ENST00000449384 154 ntBASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 ATP5J2P3-201ENST00000451550 258 ntBASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 RNU1-131P-201ENST00000458943 161 ntBASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 AC023141.11-201ENST00000508864 202 ntBASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 MIR3683-201ENST00000580847 82 ntBASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 AC007318.2-201ENST00000620999 243 ntBASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 AC091932.4-201ENST00000623386 200 ntBASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2OQ9C0C9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 RNU6-1084P-201ENST00000362498 107 ntBASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 SNORA63D-201ENST00000364359 132 ntBASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 snoU2-30.1-201ENST00000365012 70 ntBASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 AL138827.1-201ENST00000402666 306 ntBASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 AL163195.1-201ENST00000496941 348 ntBASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 SNORD45.4-201ENST00000516629 73 ntBASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 AC026421.1-201ENST00000519101 163 ntBASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 AC024995.1-201ENST00000523014 93 ntBASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 AP003484.1-201ENST00000530974 250 ntBASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBE2OQ9C0C9 RNU1-112P-201ENST00000364401 164 ntBASIC3.1□□□□□ -1.91
UBE2OQ9C0C9 MIR515-2-201ENST00000384883 83 ntBASIC3.1□□□□□ -1.91
UBE2OQ9C0C9 MIR515-1-201ENST00000384884 83 ntBASIC3.1□□□□□ -1.91
UBE2OQ9C0C9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.1□□□□□ -1.91
UBE2OQ9C0C9 RNA5SP57-201ENST00000459463 123 ntBASIC3.1□□□□□ -1.91
UBE2OQ9C0C9 RN7SL636P-201ENST00000497504 294 ntBASIC3.1□□□□□ -1.91
UBE2OQ9C0C9 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.1□□□□□ -1.91
UBE2OQ9C0C9 HSPE1P19-201ENST00000603327 295 ntBASIC3.1□□□□□ -1.91
UBE2OQ9C0C9 AL355297.2-201ENST00000604792 129 ntBASIC3.1□□□□□ -1.91
UBE2OQ9C0C9 MIR7111-201ENST00000619751 72 ntBASIC3.1□□□□□ -1.91
UBE2OQ9C0C9 CTSLP2-204ENST00000629029 392 ntBASIC3.1□□□□□ -1.91
UBE2OQ9C0C9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms