Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.5□□□□□ -2.49
UPF3BQ9BZI7 RNU6-855P-201ENST00000410395 104 ntBASIC-0.5□□□□□ -2.49
UPF3BQ9BZI7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.5□□□□□ -2.49
UPF3BQ9BZI7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.5□□□□□ -2.49
UPF3BQ9BZI7 MTND2P39-201ENST00000457230 764 ntBASIC-0.5□□□□□ -2.49
UPF3BQ9BZI7 SNORA40.9-201ENST00000515895 93 ntBASIC-0.5□□□□□ -2.49
UPF3BQ9BZI7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.5□□□□□ -2.49
UPF3BQ9BZI7 AL355297.3-201ENST00000604082 446 ntBASIC-0.5□□□□□ -2.49
UPF3BQ9BZI7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.5□□□□□ -2.49
UPF3BQ9BZI7 MIR548AZ-201ENST00000616567 95 ntBASIC-0.5□□□□□ -2.49
UPF3BQ9BZI7 SNORA18.1-201ENST00000363418 128 ntBASIC-0.51□□□□□ -2.49
UPF3BQ9BZI7 SNORD115-24-201ENST00000363528 82 ntBASIC-0.51□□□□□ -2.49
UPF3BQ9BZI7 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.51□□□□□ -2.49
UPF3BQ9BZI7 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.51□□□□□ -2.49
UPF3BQ9BZI7 RNU2-61P-201ENST00000411069 191 ntBASIC-0.51□□□□□ -2.49
UPF3BQ9BZI7 IGKV1-22-201ENST00000524313 326 ntBASIC-0.51□□□□□ -2.49
UPF3BQ9BZI7 RNU6-161P-201ENST00000363051 106 ntBASIC-0.52□□□□□ -2.49
UPF3BQ9BZI7 AL031003.1-201ENST00000404229 172 ntBASIC-0.52□□□□□ -2.49
UPF3BQ9BZI7 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.52□□□□□ -2.49
UPF3BQ9BZI7 MTND1P17-201ENST00000448961 204 ntBASIC-0.52□□□□□ -2.49
UPF3BQ9BZI7 RPL39P34-201ENST00000477141 156 ntBASIC-0.52□□□□□ -2.49
UPF3BQ9BZI7 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.52□□□□□ -2.49
UPF3BQ9BZI7 ZNF519P2-201ENST00000557032 169 ntBASIC-0.52□□□□□ -2.49
UPF3BQ9BZI7 AC073648.5-201ENST00000603502 305 ntBASIC-0.52□□□□□ -2.49
UPF3BQ9BZI7 AC022306.2-201ENST00000617563 647 ntBASIC-0.52□□□□□ -2.49
UPF3BQ9BZI7 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 RNU6-879P-201ENST00000364328 108 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 SNORA24-201ENST00000384096 131 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 MIR518F-201ENST00000384973 87 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 MIR190B-201ENST00000401119 79 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 SUMO1P3-201ENST00000439961 304 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 AC087499.4-201ENST00000448505 178 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 SNORD126-201ENST00000459475 77 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 RNU6-135P-201ENST00000516769 101 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 AC006380.1-201ENST00000603598 186 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 AC087752.4-201ENST00000605911 462 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 AL391262.2-201ENST00000622466 494 ntBASIC-0.53□□□□□ -2.49
UPF3BQ9BZI7 SNORD114-11-201ENST00000363738 75 ntBASIC-0.54□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.54□□□□□ -2.5
UPF3BQ9BZI7 RNU6-480P-201ENST00000384332 107 ntBASIC-0.54□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.54□□□□□ -2.5
UPF3BQ9BZI7 MIR588-201ENST00000384900 83 ntBASIC-0.54□□□□□ -2.5
UPF3BQ9BZI7 RNA5SP163-201ENST00000410304 99 ntBASIC-0.54□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.54□□□□□ -2.5
UPF3BQ9BZI7 MTND1P24-201ENST00000552175 861 ntBASIC-0.54□□□□□ -2.5
UPF3BQ9BZI7 MIR5701-3-201ENST00000578890 82 ntBASIC-0.54□□□□□ -2.5
UPF3BQ9BZI7 MIR5701-1-201ENST00000585138 82 ntBASIC-0.54□□□□□ -2.5
UPF3BQ9BZI7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.54□□□□□ -2.5
UPF3BQ9BZI7 MIR5701-2-201ENST00000615634 82 ntBASIC-0.54□□□□□ -2.5
UPF3BQ9BZI7 AC068137.3-201ENST00000639191 341 ntBASIC-0.54□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 RNU6-318P-201ENST00000384283 103 ntBASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 SNORD38B-201ENST00000384690 67 ntBASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 SNORD75.1-201ENST00000408373 60 ntBASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 RNU4-55P-201ENST00000410731 137 ntBASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 MTND3P21-201ENST00000433774 331 ntBASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 POLR2KP2-201ENST00000438155 177 ntBASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 RNA5SP47-201ENST00000517230 109 ntBASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 LRRC34P1-201ENST00000542742 915 ntBASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 AC022960.3-201ENST00000619794 441 ntBASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 AC134878.1-201ENST00000619901 243 ntBASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 AC091304.10-201ENST00000641554 121 ntBASIC-0.55□□□□□ -2.5
UPF3BQ9BZI7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 RNU6-306P-201ENST00000384617 107 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 MIR635-201ENST00000384830 98 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 MIR563-201ENST00000385080 79 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 MCFD2P1-201ENST00000417812 300 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 AL445567.1-201ENST00000439121 144 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 snoU13.2-201ENST00000459201 104 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 RNU7-66P-201ENST00000459469 62 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 PRDX4P1-201ENST00000507189 574 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 AC026782.1-201ENST00000512952 449 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 RNU6-504P-201ENST00000516568 104 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 RNU6-256P-201ENST00000516747 97 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 MIR4752-201ENST00000579672 72 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 MIR3152-201ENST00000579801 74 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 MIR3681-201ENST00000580089 72 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 MIR3672-201ENST00000584290 82 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 AC004467.1-201ENST00000615678 330 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 MIR8066-201ENST00000617280 78 ntBASIC-0.56□□□□□ -2.5
UPF3BQ9BZI7 RNU6-652P-201ENST00000365488 107 ntBASIC-0.57□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.57□□□□□ -2.5
UPF3BQ9BZI7 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.57□□□□□ -2.5
UPF3BQ9BZI7 MT-TF-201ENST00000387314 71 ntBASIC-0.57□□□□□ -2.5
UPF3BQ9BZI7 AC236972.2-201ENST00000434979 310 ntBASIC-0.57□□□□□ -2.5
UPF3BQ9BZI7 MTATP6P23-201ENST00000440153 476 ntBASIC-0.57□□□□□ -2.5
UPF3BQ9BZI7 CHEK2P4-201ENST00000450340 246 ntBASIC-0.57□□□□□ -2.5
UPF3BQ9BZI7 AC114755.3-201ENST00000481111 251 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms