Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNU6-460P-201ENST00000391158 108 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.587-201ENST00000391210 103 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 RNU11-5P-201ENST00000391216 129 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.630-201ENST00000411370 108 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 AC245102.2-201ENST00000448956 180 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 AC097462.1-201ENST00000514125 324 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 RNU6-1146P-201ENST00000516282 102 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 RNA5SP395-201ENST00000516567 118 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 RNU6-197P-201ENST00000516680 100 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 IGLV3-17-201ENST00000519099 244 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.33□□□□□ -2.04
SALL3Q9BXA9 MIR3935-201ENST00000583472 104 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 MIR4438-201ENST00000585271 93 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 AC108081.1-201ENST00000604358 221 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 MIR6895-201ENST00000613497 78 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.33□□□□□ -2.04
SALL3Q9BXA9 MIR203B-201ENST00000636080 86 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 ZNF702P-202ENST00000434269 1966 ntBASIC2.32□□□□□ -2.04
SALL3Q9BXA9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.116-201ENST00000363292 103 ntBASIC2.32□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.203-201ENST00000364106 102 ntBASIC2.32□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.348-201ENST00000365403 103 ntBASIC2.32□□□□□ -2.04
SALL3Q9BXA9 AC245047.4-201ENST00000433189 144 ntBASIC2.32□□□□□ -2.04
SALL3Q9BXA9 AC003989.2-201ENST00000440224 169 ntBASIC2.32□□□□□ -2.04
SALL3Q9BXA9 AC023449.1-201ENST00000454464 154 ntBASIC2.32□□□□□ -2.04
SALL3Q9BXA9 HMGN2P23-201ENST00000456759 269 ntBASIC2.32□□□□□ -2.04
SALL3Q9BXA9 RNU6-126P-201ENST00000516685 103 ntBASIC2.32□□□□□ -2.04
SALL3Q9BXA9 RNU7-172P-201ENST00000517125 64 ntBASIC2.32□□□□□ -2.04
SALL3Q9BXA9 MIR4498-201ENST00000577599 66 ntBASIC2.32□□□□□ -2.04
SALL3Q9BXA9 AC025521.1-201ENST00000621624 286 ntBASIC2.32□□□□□ -2.04
SALL3Q9BXA9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SALL3Q9BXA9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
SALL3Q9BXA9 RNU6-484P-201ENST00000384016 107 ntBASIC2.31□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.432-201ENST00000384087 111 ntBASIC2.31□□□□□ -2.04
SALL3Q9BXA9 MIR9-3-201ENST00000385084 90 ntBASIC2.31□□□□□ -2.04
SALL3Q9BXA9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.31□□□□□ -2.04
SALL3Q9BXA9 RNU6-588P-201ENST00000410281 105 ntBASIC2.31□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.622-201ENST00000411091 108 ntBASIC2.31□□□□□ -2.04
SALL3Q9BXA9 RNA5SP270-201ENST00000411361 118 ntBASIC2.31□□□□□ -2.04
SALL3Q9BXA9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.31□□□□□ -2.04
SALL3Q9BXA9 SNORD33.1-201ENST00000516213 88 ntBASIC2.31□□□□□ -2.04
SALL3Q9BXA9 RNU6-1299P-201ENST00000516316 100 ntBASIC2.31□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.712-201ENST00000517011 92 ntBASIC2.31□□□□□ -2.04
SALL3Q9BXA9 AC121758.2-201ENST00000553271 193 ntBASIC2.31□□□□□ -2.04
SALL3Q9BXA9 uc_338.4-201ENST00000616635 176 ntBASIC2.31□□□□□ -2.04
SALL3Q9BXA9 U4atac.1-201ENST00000618345 95 ntBASIC2.31□□□□□ -2.04
SALL3Q9BXA9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SALL3Q9BXA9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SALL3Q9BXA9 MIR340-201ENST00000362125 95 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 RNU1-23P-201ENST00000363361 144 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.796-201ENST00000364268 102 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 RNU6-1131P-201ENST00000364955 107 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.799-201ENST00000364992 102 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 MIR488-201ENST00000365739 83 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 RNU6-972P-201ENST00000391208 107 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 SUMO2P12-201ENST00000405924 140 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 RNA5SP225-201ENST00000410874 135 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 RPS4XP11-201ENST00000446897 772 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 AP001328.1-201ENST00000528550 176 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 MIR3126-201ENST00000577443 74 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 AL929325.1-201ENST00000603096 117 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 AC097639.2-201ENST00000603159 172 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 MIR3914-2-201ENST00000637339 95 ntBASIC2.3□□□□□ -2.04
SALL3Q9BXA9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.3□□□□□ -2.04
SALL3Q9BXA9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.29□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.35-201ENST00000362601 101 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 RNU6-978P-201ENST00000364371 103 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 SNORA25.7-201ENST00000364375 127 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 RNU6-294P-201ENST00000364999 102 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 MIR520G-201ENST00000385064 90 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 SNORA26-201ENST00000391286 122 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 MIR1253-201ENST00000408273 105 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 AC060773.1-201ENST00000421698 310 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 AC009238.1-201ENST00000442165 424 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 AC009237.6-201ENST00000446969 424 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.29□□□□□ -2.04
SALL3Q9BXA9 RNU5E-3P-201ENST00000515913 68 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 SNORD77.4-201ENST00000516158 81 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 RNU6-521P-201ENST00000516663 105 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 AC011604.1-201ENST00000545978 196 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 MTND5P34-201ENST00000568888 325 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 MIR4662B-201ENST00000579498 81 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 MIR4781-201ENST00000585250 76 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 U7.2-201ENST00000607576 63 ntBASIC2.29□□□□□ -2.04
SALL3Q9BXA9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SALL3Q9BXA9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
SALL3Q9BXA9 RNU6-235P-201ENST00000362644 107 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 RNU6-1138P-201ENST00000365359 106 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 RNU6-1080P-201ENST00000383982 107 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 RNU1-148P-201ENST00000384472 162 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 RNU6-136P-201ENST00000384663 107 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 MIR144-201ENST00000384886 86 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 SNORD23.1-201ENST00000408212 104 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 RNA5SP489-201ENST00000410986 109 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 SRIP3-201ENST00000413200 219 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 AL353689.1-201ENST00000438895 199 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 AC245517.4-201ENST00000448601 281 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 SNORD11-201ENST00000459124 84 ntBASIC2.28□□□□□ -2.04
SALL3Q9BXA9 RNU7-99P-201ENST00000516271 62 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms