Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 RNU6-886P-201ENST00000384319 105 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 SNORA8.3-201ENST00000384679 139 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 MIR520G-201ENST00000385064 90 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 PIGPP3-201ENST00000425307 415 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 AC010154.1-201ENST00000425857 269 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.21□□□□□ -2.22
ZIM3Q96PE6 MIR4762-201ENST00000585261 75 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 RNU2-4P-201ENST00000606190 192 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 AC108706.1-201ENST00000611053 297 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.802-201ENST00000614892 130 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 U6.106-201ENST00000636360 105 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.21□□□□□ -2.22
ZIM3Q96PE6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
ZIM3Q96PE6 RNU6-661P-201ENST00000362409 107 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.238-201ENST00000364441 102 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 U8.5-201ENST00000364528 136 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.267-201ENST00000364679 109 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.293-201ENST00000364908 93 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.555-201ENST00000384673 110 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 MIR522-201ENST00000385071 87 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 MIR616-201ENST00000385293 97 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 AL161935.2-201ENST00000414627 60 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 AL591704.2-201ENST00000421658 181 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 AC245047.3-201ENST00000429428 127 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 SNRPGP14-201ENST00000435400 219 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.2□□□□□ -2.22
ZIM3Q96PE6 AL358944.1-201ENST00000528537 144 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 MIR5688-201ENST00000580619 83 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 MIR4422-201ENST00000581938 83 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 AP001485.1-201ENST00000604799 199 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 AC095038.3-201ENST00000634439 195 ntBASIC1.2□□□□□ -2.22
ZIM3Q96PE6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.2□□□□□ -2.22
ZIM3Q96PE6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
ZIM3Q96PE6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.75-201ENST00000362927 97 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 RNU6-1020P-201ENST00000363684 107 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.180-201ENST00000363867 113 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 RNU6-439P-201ENST00000384188 106 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 MIR194-1-201ENST00000384892 85 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 RNU6-440P-201ENST00000390882 105 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 RNA5SP323-201ENST00000391094 133 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 RNU6-1135P-201ENST00000411083 103 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.793-201ENST00000411222 111 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.19□□□□□ -2.22
ZIM3Q96PE6 AL138752.1-201ENST00000452964 351 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.19□□□□□ -2.22
ZIM3Q96PE6 AP002392.1-201ENST00000537692 208 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.19□□□□□ -2.22
ZIM3Q96PE6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.19□□□□□ -2.22
ZIM3Q96PE6 MIR4724-201ENST00000579485 89 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 AC098479.1-201ENST00000609225 154 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 AL391903.3-201ENST00000612158 163 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 MIR8074-201ENST00000615081 81 ntBASIC1.19□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.7-201ENST00000362352 102 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 RNU6-818P-201ENST00000364837 108 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.441-201ENST00000384123 112 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
ZIM3Q96PE6 SNORD72-201ENST00000390994 80 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.18□□□□□ -2.22
ZIM3Q96PE6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.18□□□□□ -2.22
ZIM3Q96PE6 SNRPGP8-201ENST00000454064 226 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 snoU13.26-201ENST00000459452 105 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 SNORD77.4-201ENST00000516158 81 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 RNU6-255P-201ENST00000516957 105 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 RNU6-1116P-201ENST00000517269 99 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 AP002004.2-201ENST00000531656 154 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 AC109810.1-201ENST00000534066 224 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 MRPS18CP4-201ENST00000535821 231 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 RPL23AP91-201ENST00000569211 455 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 MIR4303-201ENST00000581299 66 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 AC072026.1-201ENST00000605023 201 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 AC021506.2-201ENST00000612354 169 ntBASIC1.18□□□□□ -2.22
ZIM3Q96PE6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.18□□□□□ -2.22
ZIM3Q96PE6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.18□□□□□ -2.22
ZIM3Q96PE6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ZIM3Q96PE6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
ZIM3Q96PE6 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.121-201ENST00000363309 113 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 RNY1P11-201ENST00000363759 113 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 SNORD50B-201ENST00000364995 70 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 RNU6-424P-201ENST00000384367 105 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 RNU6-1031P-201ENST00000384773 107 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 MIR520A-201ENST00000384862 85 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 MIR548A2-201ENST00000384956 97 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 MIR513A1-201ENST00000385138 129 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
ZIM3Q96PE6 RNU6-578P-201ENST00000390980 103 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 RNU1-78P-201ENST00000391248 165 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 U8.16-201ENST00000391279 133 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 AL606845.1-201ENST00000404881 255 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 RNU6-394P-201ENST00000410735 107 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 CALM2P4-201ENST00000430810 426 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 AC233266.1-201ENST00000454518 96 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 HMGN1P7-201ENST00000491722 313 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 RN7SKP164-201ENST00000516138 266 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 RNU6-1212P-201ENST00000517023 104 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.17□□□□□ -2.22
ZIM3Q96PE6 MIR4744-201ENST00000581563 82 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 284.3 ms