Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC069257.2-201ENST00000441819 155 ntBASIC3.59□□□□□ -1.83
TRIM47Q96LD4 AC087499.4-201ENST00000448505 178 ntBASIC3.59□□□□□ -1.83
TRIM47Q96LD4 AC108938.1-201ENST00000451204 136 ntBASIC3.59□□□□□ -1.83
TRIM47Q96LD4 RNU7-113P-201ENST00000459273 62 ntBASIC3.59□□□□□ -1.83
TRIM47Q96LD4 SNORA31.4-201ENST00000516049 129 ntBASIC3.59□□□□□ -1.83
TRIM47Q96LD4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM47Q96LD4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM47Q96LD4 MIR4319-201ENST00000577285 85 ntBASIC3.59□□□□□ -1.83
TRIM47Q96LD4 uc_338.25-201ENST00000613756 156 ntBASIC3.59□□□□□ -1.83
TRIM47Q96LD4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM47Q96LD4 AC008264.2-201ENST00000610193 3731 ntBASIC3.59□□□□□ -1.84
TRIM47Q96LD4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM47Q96LD4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM47Q96LD4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM47Q96LD4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM47Q96LD4 Y_RNA.171-201ENST00000363760 102 ntBASIC3.58□□□□□ -1.84
TRIM47Q96LD4 SNORD15B-201ENST00000384714 146 ntBASIC3.58□□□□□ -1.84
TRIM47Q96LD4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TRIM47Q96LD4 RNA5SP293-201ENST00000410527 113 ntBASIC3.58□□□□□ -1.84
TRIM47Q96LD4 MIR1270-201ENST00000459320 83 ntBASIC3.58□□□□□ -1.84
TRIM47Q96LD4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.58□□□□□ -1.84
TRIM47Q96LD4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM47Q96LD4 MIR3609-201ENST00000582661 80 ntBASIC3.58□□□□□ -1.84
TRIM47Q96LD4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM47Q96LD4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM47Q96LD4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM47Q96LD4 AC009487.2-201ENST00000420969 6821 ntBASIC3.58□□□□□ -1.84
TRIM47Q96LD4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM47Q96LD4 RNU6-478P-201ENST00000363904 110 ntBASIC3.57□□□□□ -1.84
TRIM47Q96LD4 AC105272.1-201ENST00000438604 198 ntBASIC3.57□□□□□ -1.84
TRIM47Q96LD4 AC002076.2-201ENST00000617362 122 ntBASIC3.57□□□□□ -1.84
TRIM47Q96LD4 SEPT14P17-201ENST00000617978 177 ntBASIC3.57□□□□□ -1.84
TRIM47Q96LD4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM47Q96LD4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM47Q96LD4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
TRIM47Q96LD4 AC008163.1-202ENST00000636004 2889 ntBASIC3.57□□□□□ -1.84
TRIM47Q96LD4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM47Q96LD4 Y_RNA.140-201ENST00000363474 103 ntBASIC3.56□□□□□ -1.84
TRIM47Q96LD4 HMGN2P34-201ENST00000437647 269 ntBASIC3.56□□□□□ -1.84
TRIM47Q96LD4 RNU6-871P-201ENST00000516122 100 ntBASIC3.56□□□□□ -1.84
TRIM47Q96LD4 RNU6-341P-201ENST00000516973 96 ntBASIC3.56□□□□□ -1.84
TRIM47Q96LD4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM47Q96LD4 AL358944.1-201ENST00000528537 144 ntBASIC3.56□□□□□ -1.84
TRIM47Q96LD4 MIR3134-201ENST00000579433 74 ntBASIC3.56□□□□□ -1.84
TRIM47Q96LD4 MIR548AE2-201ENST00000583456 67 ntBASIC3.56□□□□□ -1.84
TRIM47Q96LD4 U2.20-201ENST00000613956 192 ntBASIC3.56□□□□□ -1.84
TRIM47Q96LD4 MIR6079-201ENST00000635807 62 ntBASIC3.56□□□□□ -1.84
TRIM47Q96LD4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM47Q96LD4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM47Q96LD4 AP003122.5-201ENST00000527668 3766 ntBASIC3.56□□□□□ -1.84
TRIM47Q96LD4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM47Q96LD4 ICE2P2-201ENST00000483823 2787 ntBASIC3.55□□□□□ -1.84
TRIM47Q96LD4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM47Q96LD4 AC062016.1-201ENST00000355719 319 ntBASIC3.55□□□□□ -1.84
TRIM47Q96LD4 RNU6-1274P-201ENST00000384557 107 ntBASIC3.55□□□□□ -1.84
TRIM47Q96LD4 RNU11-5P-201ENST00000391216 129 ntBASIC3.55□□□□□ -1.84
TRIM47Q96LD4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.55□□□□□ -1.84
TRIM47Q96LD4 RNA5SP508-201ENST00000411327 119 ntBASIC3.55□□□□□ -1.84
TRIM47Q96LD4 RPS27P29-201ENST00000463110 252 ntBASIC3.55□□□□□ -1.84
TRIM47Q96LD4 RNU7-99P-201ENST00000516271 62 ntBASIC3.55□□□□□ -1.84
TRIM47Q96LD4 RNU6-1258P-201ENST00000516911 111 ntBASIC3.55□□□□□ -1.84
TRIM47Q96LD4 RNU7-128P-201ENST00000517247 62 ntBASIC3.55□□□□□ -1.84
TRIM47Q96LD4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM47Q96LD4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM47Q96LD4 SNORD68-201ENST00000363214 84 ntBASIC3.54□□□□□ -1.84
TRIM47Q96LD4 RNU4-32P-201ENST00000363404 141 ntBASIC3.54□□□□□ -1.84
TRIM47Q96LD4 RNU6-1244P-201ENST00000363614 108 ntBASIC3.54□□□□□ -1.84
TRIM47Q96LD4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
TRIM47Q96LD4 AL109933.2-201ENST00000452651 260 ntBASIC3.54□□□□□ -1.84
TRIM47Q96LD4 UBL5P1-201ENST00000507979 193 ntBASIC3.54□□□□□ -1.84
TRIM47Q96LD4 SCARNA3-201ENST00000517097 143 ntBASIC3.54□□□□□ -1.84
TRIM47Q96LD4 AL353149.1-201ENST00000610667 244 ntBASIC3.54□□□□□ -1.84
TRIM47Q96LD4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.54□□□□□ -1.84
TRIM47Q96LD4 AC092881.1-201ENST00000638218 2733 ntBASIC3.54□□□□□ -1.84
TRIM47Q96LD4 MIR22-201ENST00000362190 85 ntBASIC3.53□□□□□ -1.84
TRIM47Q96LD4 RNU6-1084P-201ENST00000362498 107 ntBASIC3.53□□□□□ -1.84
TRIM47Q96LD4 Y_RNA.205-201ENST00000364128 113 ntBASIC3.53□□□□□ -1.84
TRIM47Q96LD4 Y_RNA.470-201ENST00000384307 117 ntBASIC3.53□□□□□ -1.84
TRIM47Q96LD4 SNORA27-201ENST00000384323 126 ntBASIC3.53□□□□□ -1.84
TRIM47Q96LD4 RNU6-411P-201ENST00000384451 107 ntBASIC3.53□□□□□ -1.84
TRIM47Q96LD4 SNORD67-201ENST00000390833 111 ntBASIC3.53□□□□□ -1.84
TRIM47Q96LD4 SNORA40.18-201ENST00000391200 128 ntBASIC3.53□□□□□ -1.84
TRIM47Q96LD4 SCARNA18B-201ENST00000458806 135 ntBASIC3.53□□□□□ -1.84
TRIM47Q96LD4 RNA5SP310-201ENST00000459084 116 ntBASIC3.53□□□□□ -1.84
TRIM47Q96LD4 RNU6-998P-201ENST00000515894 101 ntBASIC3.53□□□□□ -1.84
TRIM47Q96LD4 RNA5SP33-201ENST00000516687 98 ntBASIC3.53□□□□□ -1.84
TRIM47Q96LD4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
TRIM47Q96LD4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM47Q96LD4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM47Q96LD4 MIR148B-201ENST00000362252 99 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 SNORD115-2-201ENST00000362842 82 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 SNORD38.1-201ENST00000363863 68 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 snoU2-30.1-201ENST00000365012 70 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 SNORD115-20-201ENST00000365099 82 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 Y_RNA.386-201ENST00000383913 105 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 RNU6-613P-201ENST00000410412 108 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 AC097463.2-201ENST00000421074 142 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 AL450471.1-201ENST00000447509 127 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 AL049830.1-201ENST00000468034 425 ntBASIC3.52□□□□□ -1.85
TRIM47Q96LD4 TRBV12-1-201ENST00000479785 344 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms