Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.09□□□□□ -2.07
PTCD3Q96EY7 HMGN2P3-201ENST00000433603 273 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 HMGN2P5-201ENST00000436882 273 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.09□□□□□ -2.07
PTCD3Q96EY7 RNU6-313P-201ENST00000516317 112 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 SNORA31.10-201ENST00000516482 106 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 Y_RNA.686-201ENST00000516548 134 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 RNU6-504P-201ENST00000516568 104 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 RNU6-126P-201ENST00000516685 103 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 RNU2-60P-201ENST00000517290 128 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 MIR5094-201ENST00000578766 85 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 AC002984.1-201ENST00000591692 448 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 AL365205.2-201ENST00000594586 68 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 AC011603.4-201ENST00000611325 277 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 AC245060.5-201ENST00000610778 3293 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
PTCD3Q96EY7 SNORD68-201ENST00000363214 84 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 Y_RNA.127-201ENST00000363386 109 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 U8.5-201ENST00000364528 136 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 MIR539-201ENST00000365690 78 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 MIR548A2-201ENST00000384956 97 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PTCD3Q96EY7 SNORA11.4-201ENST00000408823 129 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.08□□□□□ -2.08
PTCD3Q96EY7 AL356320.1-201ENST00000429616 163 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 AC008267.6-201ENST00000441664 139 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.08□□□□□ -2.08
PTCD3Q96EY7 RPS27P21-201ENST00000486977 252 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 RNVU1-2-201ENST00000516326 135 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 RNU7-193P-201ENST00000516723 65 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 MIR3945-201ENST00000581853 98 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 AC131055.1-201ENST00000584626 316 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 AC087685.1-201ENST00000587507 141 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 U7.2-201ENST00000607576 63 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 MIR8054-201ENST00000620877 86 ntBASIC2.08□□□□□ -2.08
PTCD3Q96EY7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PTCD3Q96EY7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PTCD3Q96EY7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.07□□□□□ -2.08
PTCD3Q96EY7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
PTCD3Q96EY7 RNU6-888P-201ENST00000363010 101 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 RNA5SP205-201ENST00000364653 136 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 Y_RNA.294-201ENST00000364916 102 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 SNORD24-201ENST00000383884 75 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 SNORD116-14-201ENST00000383894 92 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 SNORD116-17-201ENST00000383929 92 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 RNU6-80P-201ENST00000384195 107 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 SNORD116-15-201ENST00000384445 92 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 SNORD116-19-201ENST00000384729 92 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PTCD3Q96EY7 RNU6-440P-201ENST00000390882 105 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 RNU6-735P-201ENST00000410612 107 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.07□□□□□ -2.08
PTCD3Q96EY7 RNU4-57P-201ENST00000515980 135 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 RNU6-1333P-201ENST00000516162 93 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 MIR3129-201ENST00000581095 76 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PTCD3Q96EY7 ZNF658B-202ENST00000615961 3375 ntBASIC2.07□□□□□ -2.08
PTCD3Q96EY7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
PTCD3Q96EY7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PTCD3Q96EY7 RNU6-508P-201ENST00000363231 103 ntBASIC2.06□□□□□ -2.08
PTCD3Q96EY7 Y_RNA.120-201ENST00000363304 110 ntBASIC2.06□□□□□ -2.08
PTCD3Q96EY7 MIR624-201ENST00000385217 97 ntBASIC2.06□□□□□ -2.08
PTCD3Q96EY7 SUMO2P12-201ENST00000405924 140 ntBASIC2.06□□□□□ -2.08
PTCD3Q96EY7 SNORD23.1-201ENST00000408212 104 ntBASIC2.06□□□□□ -2.08
PTCD3Q96EY7 SNRPGP14-201ENST00000435400 219 ntBASIC2.06□□□□□ -2.08
PTCD3Q96EY7 AC008413.1-201ENST00000511864 177 ntBASIC2.06□□□□□ -2.08
PTCD3Q96EY7 RNU6-1270P-201ENST00000517128 108 ntBASIC2.06□□□□□ -2.08
PTCD3Q96EY7 AC069114.2-201ENST00000604699 304 ntBASIC2.06□□□□□ -2.08
PTCD3Q96EY7 MIR6873-201ENST00000622788 63 ntBASIC2.06□□□□□ -2.08
PTCD3Q96EY7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.05□□□□□ -2.08
PTCD3Q96EY7 MIRLET7C-201ENST00000362160 84 ntBASIC2.05□□□□□ -2.08
PTCD3Q96EY7 SNORA63D-201ENST00000364359 132 ntBASIC2.05□□□□□ -2.08
PTCD3Q96EY7 Y_RNA.525-201ENST00000384570 113 ntBASIC2.05□□□□□ -2.08
PTCD3Q96EY7 MIR518F-201ENST00000384973 87 ntBASIC2.05□□□□□ -2.08
PTCD3Q96EY7 RNA5SP482-201ENST00000391269 118 ntBASIC2.05□□□□□ -2.08
PTCD3Q96EY7 MIR891A-201ENST00000401237 79 ntBASIC2.05□□□□□ -2.08
PTCD3Q96EY7 AL356379.1-201ENST00000414105 126 ntBASIC2.05□□□□□ -2.08
PTCD3Q96EY7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.05□□□□□ -2.08
PTCD3Q96EY7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.05□□□□□ -2.08
PTCD3Q96EY7 RNU6-693P-201ENST00000516134 107 ntBASIC2.05□□□□□ -2.08
PTCD3Q96EY7 RNU6-659P-201ENST00000516454 104 ntBASIC2.05□□□□□ -2.08
PTCD3Q96EY7 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
PTCD3Q96EY7 Y_RNA.714-201ENST00000517065 90 ntBASIC2.05□□□□□ -2.08
PTCD3Q96EY7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.05□□□□□ -2.08
PTCD3Q96EY7 Y_RNA.52-201ENST00000362760 96 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 Y_RNA.265-201ENST00000364677 108 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 Y_RNA.280-201ENST00000364765 112 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 SNORD77.3-201ENST00000391113 65 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PTCD3Q96EY7 RNA5SP127-201ENST00000411051 133 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.04□□□□□ -2.08
PTCD3Q96EY7 HSPE1P9-201ENST00000440046 311 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 SNRPGP13-201ENST00000442212 177 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 STAG3L5P-204ENST00000443759 179 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 RNU7-107P-201ENST00000459121 61 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 SNORA18.4-201ENST00000516440 124 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms