| FOXJ1 | Q92949 | MIR4513-201 | ENST00000581077 | 86 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | MIR4439-201 | ENST00000583746 | 80 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | AL161716.1-201 | ENST00000606365 | 273 nt | TSL 5 BASIC | 3.36 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | ST7-OT3_3.1-201 | ENST00000611709 | 115 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | AC091304.10-201 | ENST00000641554 | 121 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | TCF12-203 | ENST00000343827 | 3956 nt | TSL 1 (best) BASIC | 3.36 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | PHTF2-202 | ENST00000275575 | 4541 nt | TSL 1 (best) BASIC | 3.36 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | MIRLET7C-201 | ENST00000362160 | 84 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | Y_RNA.190-201 | ENST00000363964 | 101 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | RNA5SP493-201 | ENST00000364115 | 91 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | Y_RNA.494-201 | ENST00000384432 | 111 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | MIR1267-201 | ENST00000408723 | 78 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | SNORA11.4-201 | ENST00000408823 | 129 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | AC015922.2-201 | ENST00000435593 | 184 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | STAG3L5P-204 | ENST00000443759 | 179 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | SNORA70.19-201 | ENST00000516717 | 90 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | AC096720.1-201 | ENST00000604441 | 183 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | MIR8054-201 | ENST00000620877 | 86 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | RASA1-202 | ENST00000456692 | 3776 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | ARHGAP12-201 | ENST00000311380 | 4625 nt | TSL 1 (best) BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | NOC3L-201 | ENST00000371361 | 3455 nt | APPRIS P1 TSL 1 (best) BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | NEB-204 | ENST00000409198 | 20637 nt | APPRIS P3 TSL 5 BASIC | 3.35 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | PHF6-205 | ENST00000625464 | 4434 nt | APPRIS ALT1 TSL 5 BASIC | 3.34 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | MIR1262-201 | ENST00000408276 | 93 nt | BASIC | 3.34 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | RPL32P35-201 | ENST00000415214 | 394 nt | BASIC | 3.34 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | UBL5P3-201 | ENST00000475112 | 231 nt | BASIC | 3.34 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | Y_RNA.659-201 | ENST00000515994 | 113 nt | BASIC | 3.34 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | MIR3616-201 | ENST00000584070 | 92 nt | BASIC | 3.34 | □□□□□ -1.87 | | |
| FOXJ1 | Q92949 | CEP44-203 | ENST00000426172 | 3037 nt | TSL 5 BASIC | 3.34 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | AL021368.2-201 | ENST00000606125 | 5352 nt | BASIC | 3.34 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | ZNF804B-202 | ENST00000611114 | 3968 nt | TSL 5 BASIC | 3.33 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | OGN-202 | ENST00000375561 | 2743 nt | APPRIS P1 TSL 1 (best) BASIC | 3.33 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | VPS13C-203 | ENST00000395896 | 14579 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.33 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | Y_RNA.171-201 | ENST00000363760 | 102 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU6-219P-201 | ENST00000364728 | 107 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | SNORA1.2-201 | ENST00000365189 | 134 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | COTL1P1-201 | ENST00000422309 | 375 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNA5SP341-201 | ENST00000516261 | 117 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | MIR2276-201 | ENST00000516886 | 89 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | MIR3169-201 | ENST00000578032 | 83 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | ANKAR-209 | ENST00000520309 | 4410 nt | APPRIS P1 TSL 5 BASIC | 3.33 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | PRKG2-206 | ENST00000545647 | 3852 nt | TSL 5 BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | OXR1-215 | ENST00000531443 | 3599 nt | TSL 5 BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | MIR422A-201 | ENST00000362286 | 90 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU6-616P-201 | ENST00000384353 | 107 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | Y_RNA.500-201 | ENST00000384466 | 111 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNA5SP109-201 | ENST00000391010 | 116 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNA5SP261-201 | ENST00000410536 | 106 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU2-40P-201 | ENST00000410833 | 196 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RPS29P12-201 | ENST00000460178 | 152 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU6-65P-201 | ENST00000516332 | 98 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU6-1116P-201 | ENST00000517269 | 99 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | NDUFB9P3-201 | ENST00000521269 | 501 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | Hammerhead_HH9.1-201 | ENST00000616606 | 77 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | AL365361.1-201 | ENST00000566942 | 3481 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | KCNJ16-203 | ENST00000392671 | 3981 nt | APPRIS P1 TSL 2 BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | MIR30E-201 | ENST00000362104 | 92 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU6-1313P-201 | ENST00000362622 | 102 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU6-833P-201 | ENST00000363486 | 107 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | SNORD116-10-201 | ENST00000363791 | 102 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | Y_RNA.426-201 | ENST00000384068 | 113 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | SNORA70.7-201 | ENST00000384159 | 133 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | SNORA48.8-201 | ENST00000391324 | 134 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | AL353747.2-201 | ENST00000439207 | 205 nt | TSL 3 BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU6-521P-201 | ENST00000516663 | 105 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU6-1258P-201 | ENST00000516911 | 111 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | AC008115.2-201 | ENST00000539988 | 241 nt | TSL 3 BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | EIF4BP1-201 | ENST00000554881 | 351 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | MIR6841-201 | ENST00000637129 | 72 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | AC245060.5-201 | ENST00000610778 | 3293 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | GMFB-208 | ENST00000554908 | 6721 nt | TSL 1 (best) BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | PHF6-201 | ENST00000332070 | 4759 nt | APPRIS P2 TSL 1 (best) BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | SYNE1-212 | ENST00000423061 | 27436 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.31 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | SNORA22.1-201 | ENST00000362701 | 134 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | Y_RNA.620-201 | ENST00000411009 | 88 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | AC092783.1-201 | ENST00000435832 | 231 nt | TSL 3 BASIC | 3.3 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU6-857P-201 | ENST00000515893 | 110 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNA5SP33-201 | ENST00000516687 | 98 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU7-181P-201 | ENST00000517234 | 74 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | MIR4668-201 | ENST00000582284 | 70 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | U4atac.1-201 | ENST00000618345 | 95 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | MAPK10-362 | ENST00000641864 | 4484 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | ATP2C1-202 | ENST00000359644 | 3401 nt | APPRIS P3 TSL 1 (best) BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | OR4C11-202 | ENST00000641580 | 2737 nt | APPRIS P1 BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RASSF8-210 | ENST00000541490 | 5505 nt | APPRIS P1 TSL 5 BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU1-70P-201 | ENST00000362618 | 164 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU6-23P-201 | ENST00000363283 | 107 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | SNORA1.1-201 | ENST00000364671 | 133 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | SPRR2E-201 | ENST00000368750 | 678 nt | APPRIS P1 TSL 1 (best) BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | Y_RNA.437-201 | ENST00000384113 | 113 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | Y_RNA.467-201 | ENST00000384297 | 102 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU6-24P-201 | ENST00000384440 | 107 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | TRAV39-201 | ENST00000390466 | 331 nt | APPRIS P1 BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU7-53P-201 | ENST00000516705 | 60 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | RNU6-267P-201 | ENST00000516714 | 103 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | AC019288.1-201 | ENST00000557918 | 224 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | AC009093.3-203 | ENST00000565800 | 121 nt | TSL 2 BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | MIR548AE2-201 | ENST00000583456 | 67 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | MIR4298-201 | ENST00000584380 | 73 nt | BASIC | 3.29 | □□□□□ -1.88 | | |
| FOXJ1 | Q92949 | AC245427.9-201 | ENST00000633713 | 53 nt | APPRIS P1 BASIC | 3.29 | □□□□□ -1.88 | | |