Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RNA5SP467-201ENST00000391274 118 ntBASIC3.77□□□□□ -1.81
NKX2-3Q8TAU0 SNORA48.8-201ENST00000391324 134 ntBASIC3.77□□□□□ -1.81
NKX2-3Q8TAU0 RNU6-177P-201ENST00000411257 104 ntBASIC3.77□□□□□ -1.81
NKX2-3Q8TAU0 AL445685.2-201ENST00000422551 342 ntBASIC3.77□□□□□ -1.81
NKX2-3Q8TAU0 AC009969.1-201ENST00000438726 172 ntBASIC3.77□□□□□ -1.81
NKX2-3Q8TAU0 AC004223.1-201ENST00000479840 271 ntBASIC3.77□□□□□ -1.81
NKX2-3Q8TAU0 AC104027.1-201ENST00000521887 300 ntBASIC3.77□□□□□ -1.81
NKX2-3Q8TAU0 MIR3186-201ENST00000577404 85 ntBASIC3.77□□□□□ -1.81
NKX2-3Q8TAU0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.77□□□□□ -1.81
NKX2-3Q8TAU0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NKX2-3Q8TAU0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.77□□□□□ -1.81
NKX2-3Q8TAU0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-3Q8TAU0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-3Q8TAU0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-34-201ENST00000362441 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-12-201ENST00000362583 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-29-201ENST00000362834 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-9-201ENST00000362912 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-21-201ENST00000362963 81 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-14-201ENST00000363090 81 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-41-201ENST00000363608 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-11-201ENST00000363616 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-5-201ENST00000363633 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-39-201ENST00000363694 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-4-201ENST00000363810 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-6-201ENST00000363942 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-42-201ENST00000364273 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-15-201ENST00000364809 81 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-26-201ENST00000365067 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-10-201ENST00000365073 81 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-43-201ENST00000365503 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-36-201ENST00000365629 82 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 MIR591-201ENST00000385290 95 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 RPS12P2-201ENST00000439728 269 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 MIR1270-201ENST00000459320 83 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 RNA5SP356-201ENST00000515972 94 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 RPPH1-2P-201ENST00000516688 293 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 RNU6-965P-201ENST00000516721 96 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 RNU6-1258P-201ENST00000516911 111 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 MIR4435-1-201ENST00000582552 80 ntBASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-3Q8TAU0 SNORD38.1-201ENST00000363863 68 ntBASIC3.75□□□□□ -1.81
NKX2-3Q8TAU0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NKX2-3Q8TAU0 RN7SL863P-201ENST00000462370 296 ntBASIC3.75□□□□□ -1.81
NKX2-3Q8TAU0 MIR5047-201ENST00000579212 100 ntBASIC3.75□□□□□ -1.81
NKX2-3Q8TAU0 MIR548AE2-201ENST00000583456 67 ntBASIC3.75□□□□□ -1.81
NKX2-3Q8TAU0 uc_338.25-201ENST00000613756 156 ntBASIC3.75□□□□□ -1.81
NKX2-3Q8TAU0 AC110079.1-202ENST00000635213 138 ntBASIC3.75□□□□□ -1.81
NKX2-3Q8TAU0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-3Q8TAU0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
NKX2-3Q8TAU0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
NKX2-3Q8TAU0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-3Q8TAU0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX2-3Q8TAU0 SNORD115-37-201ENST00000363768 82 ntBASIC3.74□□□□□ -1.81
NKX2-3Q8TAU0 Y_RNA.241-201ENST00000364470 117 ntBASIC3.74□□□□□ -1.81
NKX2-3Q8TAU0 RNU6-546P-201ENST00000383991 107 ntBASIC3.74□□□□□ -1.81
NKX2-3Q8TAU0 RNA5SP33-201ENST00000516687 98 ntBASIC3.74□□□□□ -1.81
NKX2-3Q8TAU0 MIR3152-201ENST00000579801 74 ntBASIC3.74□□□□□ -1.81
NKX2-3Q8TAU0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX2-3Q8TAU0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
NKX2-3Q8TAU0 MIR338-201ENST00000636369 67 ntBASIC3.74□□□□□ -1.81
NKX2-3Q8TAU0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX2-3Q8TAU0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NKX2-3Q8TAU0 Y_RNA.247-201ENST00000364500 92 ntBASIC3.73□□□□□ -1.81
NKX2-3Q8TAU0 SNORA7.4-201ENST00000384249 137 ntBASIC3.73□□□□□ -1.81
NKX2-3Q8TAU0 MICF-203ENST00000432679 129 ntBASIC3.73□□□□□ -1.81
NKX2-3Q8TAU0 CST9LP2-201ENST00000437612 320 ntBASIC3.73□□□□□ -1.81
NKX2-3Q8TAU0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.73□□□□□ -1.81
NKX2-3Q8TAU0 AL135938.1-201ENST00000443141 297 ntBASIC3.73□□□□□ -1.81
NKX2-3Q8TAU0 RNU6-237P-201ENST00000515985 71 ntBASIC3.73□□□□□ -1.81
NKX2-3Q8TAU0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.73□□□□□ -1.81
NKX2-3Q8TAU0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.73□□□□□ -1.81
NKX2-3Q8TAU0 CTSLP2-204ENST00000629029 392 ntBASIC3.73□□□□□ -1.81
NKX2-3Q8TAU0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
NKX2-3Q8TAU0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NKX2-3Q8TAU0 AL442644.1-201ENST00000454390 3105 ntBASIC3.72□□□□□ -1.81
NKX2-3Q8TAU0 Y_RNA.470-201ENST00000384307 117 ntBASIC3.72□□□□□ -1.81
NKX2-3Q8TAU0 SNORD67-201ENST00000390833 111 ntBASIC3.72□□□□□ -1.81
NKX2-3Q8TAU0 SNORA40.18-201ENST00000391200 128 ntBASIC3.72□□□□□ -1.81
NKX2-3Q8TAU0 RNA5SP482-201ENST00000391269 118 ntBASIC3.72□□□□□ -1.81
NKX2-3Q8TAU0 MIR1261-201ENST00000408659 82 ntBASIC3.72□□□□□ -1.81
NKX2-3Q8TAU0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.72□□□□□ -1.81
NKX2-3Q8TAU0 AC125388.1-201ENST00000459631 156 ntBASIC3.72□□□□□ -1.81
NKX2-3Q8TAU0 AC008885.1-201ENST00000514930 301 ntBASIC3.72□□□□□ -1.81
NKX2-3Q8TAU0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.72□□□□□ -1.81
NKX2-3Q8TAU0 UCA1.1-201ENST00000620952 75 ntBASIC3.72□□□□□ -1.81
NKX2-3Q8TAU0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NKX2-3Q8TAU0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 RNU6-1094P-201ENST00000362416 104 ntBASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 RNU6-1244P-201ENST00000363614 108 ntBASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 MIR515-2-201ENST00000384883 83 ntBASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 MIR515-1-201ENST00000384884 83 ntBASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 Z98742.3-201ENST00000418637 326 ntBASIC3.71□□□□□ -1.82
NKX2-3Q8TAU0 RPL31P63-201ENST00000422565 375 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms