Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 RN7SKP200-201ENST00000410564 320 ntBASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 RNU4-43P-201ENST00000410628 137 ntBASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 RNU2-55P-201ENST00000411146 174 ntBASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 FTH1P12-201ENST00000432137 551 ntBASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 AL392103.1-201ENST00000447000 198 ntBASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 SNORD13-201ENST00000459299 104 ntBASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-197P-201ENST00000516680 100 ntBASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 Y_RNA.714-201ENST00000517065 90 ntBASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-1116P-201ENST00000517269 99 ntBASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 AC008507.4-201ENST00000585464 127 ntBASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 AL049779.4-201ENST00000604500 156 ntBASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
SFTPA1Q8IWL2 RNU6-457P-201ENST00000363999 107 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 SNORA16B-201ENST00000364674 135 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 SNORD50B-201ENST00000364995 70 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 RNU4-11P-201ENST00000365287 132 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 Y_RNA.337-201ENST00000365312 102 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-1138P-201ENST00000365359 106 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 MIR802-201ENST00000390235 94 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 AL627390.1-201ENST00000396055 340 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 RNA5SP100-201ENST00000410903 110 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 RNA5SP59-201ENST00000410922 110 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 RNU7-34P-201ENST00000459394 64 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 RNU7-28P-201ENST00000516759 62 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 SNORA28-201ENST00000606769 126 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 Y_RNA.778-201ENST00000620203 90 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SFTPA1Q8IWL2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 Y_RNA.634-201ENST00000364811 113 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 RNA5SP190-201ENST00000365222 118 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 Y_RNA.338-201ENST00000365320 114 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-1336P-201ENST00000383886 109 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-768P-201ENST00000384683 107 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 CALM2P4-201ENST00000430810 426 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 AC011753.1-201ENST00000451001 220 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-426P-201ENST00000516464 97 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 RNU7-121P-201ENST00000516604 62 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 SNORA31.17-201ENST00000516953 127 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 MIR378D2-201ENST00000580636 98 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 AC002984.1-201ENST00000591692 448 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 AC084768.2-201ENST00000622736 221 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 MTND1P7-201ENST00000632801 297 ntBASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SFTPA1Q8IWL2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SFTPA1Q8IWL2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SFTPA1Q8IWL2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SFTPA1Q8IWL2 RNY1P11-201ENST00000363759 113 ntBASIC1.88□□□□□ -2.11
SFTPA1Q8IWL2 Y_RNA.215-201ENST00000364204 112 ntBASIC1.88□□□□□ -2.11
SFTPA1Q8IWL2 Y_RNA.400-201ENST00000383963 111 ntBASIC1.88□□□□□ -2.11
SFTPA1Q8IWL2 AL034345.1-201ENST00000407768 123 ntBASIC1.88□□□□□ -2.11
SFTPA1Q8IWL2 MIR4709-201ENST00000577272 72 ntBASIC1.88□□□□□ -2.11
SFTPA1Q8IWL2 MIR4662B-201ENST00000579498 81 ntBASIC1.88□□□□□ -2.11
SFTPA1Q8IWL2 MIR4762-201ENST00000585261 75 ntBASIC1.88□□□□□ -2.11
SFTPA1Q8IWL2 DNAJC19P2-201ENST00000593340 302 ntBASIC1.88□□□□□ -2.11
SFTPA1Q8IWL2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 SNORD14E-201ENST00000364009 85 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-704P-201ENST00000364162 103 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 U8.5-201ENST00000364528 136 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 snoU2-30.1-201ENST00000365012 70 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-163P-201ENST00000384396 106 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-950P-201ENST00000384651 107 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 SNORA20-201ENST00000384662 132 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-1031P-201ENST00000384773 107 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 SNORD37.2-201ENST00000391075 66 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 U8.16-201ENST00000391279 133 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 RNA5SP338-201ENST00000410495 85 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 snoU13.27-201ENST00000459278 104 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 AC025033.1-201ENST00000463883 194 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 AC114811.1-201ENST00000507207 168 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 Y_RNA.666-201ENST00000516187 112 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 SNORA25.12-201ENST00000516202 82 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 RNA5SP153-201ENST00000516498 76 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 SNORD45.4-201ENST00000516629 73 ntBASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.87□□□□□ -2.11
SFTPA1Q8IWL2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 MIRLET7C-201ENST00000362160 84 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-199P-201ENST00000362954 107 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 Y_RNA.488-201ENST00000384403 102 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 MIR569-201ENST00000385228 96 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 MIR613-201ENST00000385248 95 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-717P-201ENST00000459076 104 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms