Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 RNU6-363P-201ENST00000362895 105 ntBASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 Y_RNA.96-201ENST00000363092 109 ntBASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 Y_RNA.99-201ENST00000363138 105 ntBASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 RNU4-16P-201ENST00000364737 141 ntBASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 MIR592-201ENST00000384959 97 ntBASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 RNA5SP482-201ENST00000391269 118 ntBASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 MIR1261-201ENST00000408659 82 ntBASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 CST2P1-201ENST00000425770 87 ntBASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 AL139132.1-201ENST00000431587 344 ntBASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 AL109933.2-201ENST00000452651 260 ntBASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 RN7SL75P-201ENST00000461926 281 ntBASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 AL163195.1-201ENST00000496941 348 ntBASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 AC078899.2-201ENST00000595282 212 ntBASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SH3RF1Q7Z6J0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 RNU4-82P-201ENST00000362443 140 ntBASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 SNORD115-19-201ENST00000363098 82 ntBASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 SNORD115-18-201ENST00000363293 82 ntBASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 SNORA71.1-201ENST00000364523 117 ntBASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 SNORA68.1-201ENST00000364537 132 ntBASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 SNORD115-17-201ENST00000364612 82 ntBASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 SNORD38C-201ENST00000384381 69 ntBASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 RNU6-160P-201ENST00000384591 107 ntBASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 RPS29P12-201ENST00000460178 152 ntBASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 RN7SL330P-201ENST00000469709 307 ntBASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 MIR3186-201ENST00000577404 85 ntBASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 AC006160.2-201ENST00000637708 154 ntBASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 AC245060.5-201ENST00000610778 3293 ntBASIC3.5□□□□□ -1.85
SH3RF1Q7Z6J0 RNU6-661P-201ENST00000362409 107 ntBASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 RN7SKP200-201ENST00000410564 320 ntBASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 RN7SKP220-201ENST00000410611 288 ntBASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 RNU6-733P-201ENST00000410759 104 ntBASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 AL022718.1-201ENST00000412004 84 ntBASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 AL135938.1-201ENST00000443141 297 ntBASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 TRBV12-1-201ENST00000479785 344 ntBASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 RN7SL20P-201ENST00000488827 297 ntBASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 RNU7-28P-201ENST00000516759 62 ntBASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 AC007536.1-201ENST00000533382 349 ntBASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 MIR1255B1-201ENST00000636325 63 ntBASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SH3RF1Q7Z6J0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SH3RF1Q7Z6J0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SH3RF1Q7Z6J0 Y_RNA.155-201ENST00000363632 101 ntBASIC3.48□□□□□ -1.85
SH3RF1Q7Z6J0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.48□□□□□ -1.85
SH3RF1Q7Z6J0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.48□□□□□ -1.85
SH3RF1Q7Z6J0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.48□□□□□ -1.85
SH3RF1Q7Z6J0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.48□□□□□ -1.85
SH3RF1Q7Z6J0 MIR4319-201ENST00000577285 85 ntBASIC3.48□□□□□ -1.85
SH3RF1Q7Z6J0 MIR5047-201ENST00000579212 100 ntBASIC3.48□□□□□ -1.85
SH3RF1Q7Z6J0 MIR4668-201ENST00000582284 70 ntBASIC3.48□□□□□ -1.85
SH3RF1Q7Z6J0 AC091304.10-201ENST00000641554 121 ntBASIC3.48□□□□□ -1.85
SH3RF1Q7Z6J0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SH3RF1Q7Z6J0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SH3RF1Q7Z6J0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SH3RF1Q7Z6J0 AC073325.2-201ENST00000339545 159 ntBASIC3.47□□□□□ -1.85
SH3RF1Q7Z6J0 SNORA18-201ENST00000384416 132 ntBASIC3.47□□□□□ -1.85
SH3RF1Q7Z6J0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.47□□□□□ -1.85
SH3RF1Q7Z6J0 AC245047.3-201ENST00000429428 127 ntBASIC3.47□□□□□ -1.85
SH3RF1Q7Z6J0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.47□□□□□ -1.85
SH3RF1Q7Z6J0 AL353813.1-201ENST00000440700 253 ntBASIC3.47□□□□□ -1.85
SH3RF1Q7Z6J0 UQCRHP3-201ENST00000451503 251 ntBASIC3.47□□□□□ -1.85
SH3RF1Q7Z6J0 RN7SL297P-201ENST00000483161 293 ntBASIC3.47□□□□□ -1.85
SH3RF1Q7Z6J0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 SNORD45B-201ENST00000364617 72 ntBASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 RNU6-652P-201ENST00000365488 107 ntBASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 RNU6-409P-201ENST00000384114 104 ntBASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 RNU6-887P-201ENST00000410660 100 ntBASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 AC022018.1-201ENST00000430685 241 ntBASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 Y_RNA.705-201ENST00000516862 110 ntBASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 ELOCP29-201ENST00000588193 334 ntBASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 HSPE1P19-201ENST00000603327 295 ntBASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 Y_RNA.773-201ENST00000607168 90 ntBASIC3.46□□□□□ -1.86
SH3RF1Q7Z6J0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
SH3RF1Q7Z6J0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.45□□□□□ -1.86
SH3RF1Q7Z6J0 Y_RNA.95-201ENST00000363079 95 ntBASIC3.45□□□□□ -1.86
SH3RF1Q7Z6J0 SNORD114-6-201ENST00000364393 72 ntBASIC3.45□□□□□ -1.86
SH3RF1Q7Z6J0 Y_RNA.241-201ENST00000364470 117 ntBASIC3.45□□□□□ -1.86
SH3RF1Q7Z6J0 RNU4-67P-201ENST00000364569 141 ntBASIC3.45□□□□□ -1.86
SH3RF1Q7Z6J0 SNORA27-201ENST00000384323 126 ntBASIC3.45□□□□□ -1.86
SH3RF1Q7Z6J0 MIR605-201ENST00000385078 83 ntBASIC3.45□□□□□ -1.86
SH3RF1Q7Z6J0 RNA5SP380-201ENST00000517190 98 ntBASIC3.45□□□□□ -1.86
SH3RF1Q7Z6J0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.45□□□□□ -1.86
SH3RF1Q7Z6J0 AC002984.1-201ENST00000591692 448 ntBASIC3.45□□□□□ -1.86
SH3RF1Q7Z6J0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.45□□□□□ -1.86
SH3RF1Q7Z6J0 MIR203B-201ENST00000636080 86 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms