Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 AL591926.4-201ENST00000616895 298 ntBASIC2.46□□□□□ -2.02
LIMS2Q7Z4I7 AC064859.1-201ENST00000624741 174 ntBASIC2.46□□□□□ -2.02
LIMS2Q7Z4I7 MIR6079-201ENST00000635807 62 ntBASIC2.46□□□□□ -2.02
LIMS2Q7Z4I7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
LIMS2Q7Z4I7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LIMS2Q7Z4I7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 SNORA68.1-201ENST00000364537 132 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 RNU6-294P-201ENST00000364999 102 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 DEFA7P-201ENST00000382676 285 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 MIR218-1-201ENST00000384999 110 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 MIR522-201ENST00000385071 87 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 AL117342.1-201ENST00000404861 406 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 SNORA11.2-201ENST00000408318 127 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 RNU6-1186P-201ENST00000410429 97 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 AL353689.1-201ENST00000438895 199 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 AC011753.1-201ENST00000451001 220 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 AC233266.1-201ENST00000454518 96 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 RNU6-991P-201ENST00000516168 107 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 RNU6-1291P-201ENST00000516591 104 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 AC121758.2-201ENST00000553271 193 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 AL353149.1-201ENST00000610667 244 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 AC242852.1-201ENST00000612151 96 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 MIR6895-201ENST00000613497 78 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 AC244015.1-201ENST00000622301 99 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 MIR338-201ENST00000636369 67 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 MIR7515-201ENST00000637837 67 ntBASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.45□□□□□ -2.02
LIMS2Q7Z4I7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 Y_RNA.49-201ENST00000362714 112 ntBASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 RNU6-743P-201ENST00000364151 106 ntBASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 RNU6-49P-201ENST00000384256 107 ntBASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 SNORA51.10-201ENST00000384418 136 ntBASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 RNA5SP467-201ENST00000391274 118 ntBASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 AL356320.1-201ENST00000429616 163 ntBASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 RPS15AP28-201ENST00000435088 386 ntBASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 RPL39P34-201ENST00000477141 156 ntBASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 AC008413.1-201ENST00000511864 177 ntBASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 AC006441.5-201ENST00000612680 209 ntBASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 MIR6766-201ENST00000622641 72 ntBASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LIMS2Q7Z4I7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LIMS2Q7Z4I7 MIR126-201ENST00000362291 85 ntBASIC2.43□□□□□ -2.02
LIMS2Q7Z4I7 RNU6-349P-201ENST00000362402 107 ntBASIC2.43□□□□□ -2.02
LIMS2Q7Z4I7 RNY4P6-201ENST00000363667 96 ntBASIC2.43□□□□□ -2.02
LIMS2Q7Z4I7 Y_RNA.410-201ENST00000383992 113 ntBASIC2.43□□□□□ -2.02
LIMS2Q7Z4I7 Z98742.3-201ENST00000418637 326 ntBASIC2.43□□□□□ -2.02
LIMS2Q7Z4I7 CYP2C59P-201ENST00000457790 269 ntBASIC2.43□□□□□ -2.02
LIMS2Q7Z4I7 RNU6-240P-201ENST00000516098 97 ntBASIC2.43□□□□□ -2.02
LIMS2Q7Z4I7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.43□□□□□ -2.02
LIMS2Q7Z4I7 MIR3199-1-201ENST00000582434 88 ntBASIC2.43□□□□□ -2.02
LIMS2Q7Z4I7 AL359075.3-201ENST00000613288 217 ntBASIC2.43□□□□□ -2.02
LIMS2Q7Z4I7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
LIMS2Q7Z4I7 AL589743.1-201ENST00000551932 2712 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 RNU6-1131P-201ENST00000364955 107 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 Y_RNA.362-201ENST00000365518 110 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 Y_RNA.388-201ENST00000383919 113 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 RNU6-1113P-201ENST00000384348 107 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 MIR144-201ENST00000384886 86 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 MT-TI-201ENST00000387365 69 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 RN7SKP223-201ENST00000410582 62 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 RNY4P29-201ENST00000410801 97 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 SNRPGP14-201ENST00000435400 219 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 AC079804.2-201ENST00000490376 200 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 SNORA40.13-201ENST00000516379 120 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 MIR4762-201ENST00000585261 75 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 AC134878.1-201ENST00000619901 243 ntBASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LIMS2Q7Z4I7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 SNORA63.5-201ENST00000363548 123 ntBASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 SNORD114-30-201ENST00000364448 72 ntBASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 Y_RNA.544-201ENST00000384650 113 ntBASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 RNU6-440P-201ENST00000390882 105 ntBASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 RNA5SP181-201ENST00000410246 98 ntBASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 RNA5SP508-201ENST00000411327 119 ntBASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 AC099677.2-201ENST00000436385 175 ntBASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 AC018868.1-201ENST00000491307 315 ntBASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 Y_RNA.714-201ENST00000517065 90 ntBASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 MIR1273D-201ENST00000577266 86 ntBASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
LIMS2Q7Z4I7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LIMS2Q7Z4I7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LIMS2Q7Z4I7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LIMS2Q7Z4I7 SNORA1B-201ENST00000362535 133 ntBASIC2.4□□□□□ -2.03
LIMS2Q7Z4I7 Y_RNA.267-201ENST00000364679 109 ntBASIC2.4□□□□□ -2.03
LIMS2Q7Z4I7 MIR488-201ENST00000365739 83 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms