Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC245047.3-201ENST00000429428 127 ntBASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 RNU7-26P-201ENST00000458980 63 ntBASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 MIR3126-201ENST00000577443 74 ntBASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 AL670379.3-201ENST00000605040 251 ntBASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 AL121890.5-201ENST00000620848 304 ntBASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 MIR1291-201ENST00000627649 87 ntBASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 RNU6-508P-201ENST00000363231 103 ntBASIC2.97□□□□□ -1.93
PRPF40BQ6NWY9 Y_RNA.265-201ENST00000364677 108 ntBASIC2.97□□□□□ -1.93
PRPF40BQ6NWY9 SNORD58C-201ENST00000365223 64 ntBASIC2.97□□□□□ -1.93
PRPF40BQ6NWY9 MIR3169-201ENST00000578032 83 ntBASIC2.97□□□□□ -1.93
PRPF40BQ6NWY9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PRPF40BQ6NWY9 AC016717.2-201ENST00000609089 5141 ntBASIC2.97□□□□□ -1.93
PRPF40BQ6NWY9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.96□□□□□ -1.94
PRPF40BQ6NWY9 SNORA63.4-201ENST00000362763 126 ntBASIC2.96□□□□□ -1.94
PRPF40BQ6NWY9 snoU2-30.1-201ENST00000365012 70 ntBASIC2.96□□□□□ -1.94
PRPF40BQ6NWY9 DEFA7P-201ENST00000382676 285 ntBASIC2.96□□□□□ -1.94
PRPF40BQ6NWY9 MIR29C-201ENST00000385231 88 ntBASIC2.96□□□□□ -1.94
PRPF40BQ6NWY9 MIR548A3-201ENST00000385297 97 ntBASIC2.96□□□□□ -1.94
PRPF40BQ6NWY9 AC026436.1-201ENST00000510537 270 ntBASIC2.96□□□□□ -1.94
PRPF40BQ6NWY9 MIR3670-2-201ENST00000582974 65 ntBASIC2.96□□□□□ -1.94
PRPF40BQ6NWY9 MIR3670-1-201ENST00000584160 65 ntBASIC2.96□□□□□ -1.94
PRPF40BQ6NWY9 MIR3670-3-201ENST00000584855 65 ntBASIC2.96□□□□□ -1.94
PRPF40BQ6NWY9 AC108081.1-201ENST00000604358 221 ntBASIC2.96□□□□□ -1.94
PRPF40BQ6NWY9 MIR3670-4-201ENST00000612260 65 ntBASIC2.96□□□□□ -1.94
PRPF40BQ6NWY9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.96□□□□□ -1.94
PRPF40BQ6NWY9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.95□□□□□ -1.94
PRPF40BQ6NWY9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.95□□□□□ -1.94
PRPF40BQ6NWY9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PRPF40BQ6NWY9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.95□□□□□ -1.94
PRPF40BQ6NWY9 SNORA25.6-201ENST00000364121 118 ntBASIC2.95□□□□□ -1.94
PRPF40BQ6NWY9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.95□□□□□ -1.94
PRPF40BQ6NWY9 MIR548O-201ENST00000408583 114 ntBASIC2.95□□□□□ -1.94
PRPF40BQ6NWY9 Y_RNA.630-201ENST00000411370 108 ntBASIC2.95□□□□□ -1.94
PRPF40BQ6NWY9 Y_RNA.709-201ENST00000516952 92 ntBASIC2.95□□□□□ -1.94
PRPF40BQ6NWY9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PRPF40BQ6NWY9 Y_RNA.346-201ENST00000365385 112 ntBASIC2.94□□□□□ -1.94
PRPF40BQ6NWY9 RNA5SP482-201ENST00000391269 118 ntBASIC2.94□□□□□ -1.94
PRPF40BQ6NWY9 AC099677.2-201ENST00000436385 175 ntBASIC2.94□□□□□ -1.94
PRPF40BQ6NWY9 AL021397.1-201ENST00000451806 248 ntBASIC2.94□□□□□ -1.94
PRPF40BQ6NWY9 PDCD5P2-201ENST00000507570 312 ntBASIC2.94□□□□□ -1.94
PRPF40BQ6NWY9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.94□□□□□ -1.94
PRPF40BQ6NWY9 RNU6-1149P-201ENST00000516810 97 ntBASIC2.94□□□□□ -1.94
PRPF40BQ6NWY9 AC069114.2-201ENST00000604699 304 ntBASIC2.94□□□□□ -1.94
PRPF40BQ6NWY9 MIR6873-201ENST00000622788 63 ntBASIC2.94□□□□□ -1.94
PRPF40BQ6NWY9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRPF40BQ6NWY9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PRPF40BQ6NWY9 Y_RNA.164-201ENST00000363709 102 ntBASIC2.93□□□□□ -1.94
PRPF40BQ6NWY9 MIR548A2-201ENST00000384956 97 ntBASIC2.93□□□□□ -1.94
PRPF40BQ6NWY9 RNY4P18-201ENST00000391107 89 ntBASIC2.93□□□□□ -1.94
PRPF40BQ6NWY9 RN7SKP19-201ENST00000516016 252 ntBASIC2.93□□□□□ -1.94
PRPF40BQ6NWY9 RNU6-781P-201ENST00000516377 101 ntBASIC2.93□□□□□ -1.94
PRPF40BQ6NWY9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.93□□□□□ -1.94
PRPF40BQ6NWY9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.93□□□□□ -1.94
PRPF40BQ6NWY9 AC005786.1-201ENST00000588553 154 ntBASIC2.93□□□□□ -1.94
PRPF40BQ6NWY9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.93□□□□□ -1.94
PRPF40BQ6NWY9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.93□□□□□ -1.94
PRPF40BQ6NWY9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 RNU1-58P-201ENST00000362413 163 ntBASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 U8.5-201ENST00000364528 136 ntBASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 MIR518F-201ENST00000384973 87 ntBASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 SNORD77.3-201ENST00000391113 65 ntBASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 Y_RNA.617-201ENST00000410920 90 ntBASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 HMGN2P23-201ENST00000456759 269 ntBASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 Y_RNA.651-201ENST00000459380 103 ntBASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 RNU7-28P-201ENST00000516759 62 ntBASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 AC025166.1-201ENST00000612411 163 ntBASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 AC022202.1-201ENST00000613515 211 ntBASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.92□□□□□ -1.94
PRPF40BQ6NWY9 SNORD116-21-201ENST00000384507 92 ntBASIC2.91□□□□□ -1.94
PRPF40BQ6NWY9 RNA5SP109-201ENST00000391010 116 ntBASIC2.91□□□□□ -1.94
PRPF40BQ6NWY9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.91□□□□□ -1.94
PRPF40BQ6NWY9 STAG3L5P-204ENST00000443759 179 ntBASIC2.91□□□□□ -1.94
PRPF40BQ6NWY9 SNORD45.4-201ENST00000516629 73 ntBASIC2.91□□□□□ -1.94
PRPF40BQ6NWY9 MIR4762-201ENST00000585261 75 ntBASIC2.91□□□□□ -1.94
PRPF40BQ6NWY9 AL353997.5-201ENST00000618886 171 ntBASIC2.91□□□□□ -1.94
PRPF40BQ6NWY9 AC134878.1-201ENST00000619901 243 ntBASIC2.91□□□□□ -1.94
PRPF40BQ6NWY9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PRPF40BQ6NWY9 Z82195.2-201ENST00000612348 18351 ntBASIC2.9□□□□□ -1.94
PRPF40BQ6NWY9 MIR21-201ENST00000362134 72 ntBASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 SNORA22-201ENST00000383907 134 ntBASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 RNU1-148P-201ENST00000384472 162 ntBASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 MIR1263-201ENST00000408324 86 ntBASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 HMGN2P35-201ENST00000412164 270 ntBASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 AL606517.2-201ENST00000442855 241 ntBASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 HMGN2P32-201ENST00000444648 269 ntBASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 RNA5SP236-201ENST00000516169 116 ntBASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 RNU6-589P-201ENST00000516485 107 ntBASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 RNU7-25P-201ENST00000516544 62 ntBASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 RNA5SP137-201ENST00000516833 135 ntBASIC2.9□□□□□ -1.95
PRPF40BQ6NWY9 RNU7-70P-201ENST00000516941 66 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms