Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 MIR499A-201ENST00000384903 122 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 SNORA40-201ENST00000388090 126 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-1154P-201ENST00000391001 104 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 SNORA17.3-201ENST00000391159 129 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 RNA5SP467-201ENST00000391274 118 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 AL445685.2-201ENST00000422551 342 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 HMGN2P34-201ENST00000437647 269 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 AC245517.4-201ENST00000448601 281 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 RNA5SP182-201ENST00000516064 82 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-479P-201ENST00000516348 105 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 RNU7-116P-201ENST00000516940 62 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 RNU7-172P-201ENST00000517125 64 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 AC024614.2-201ENST00000577584 372 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 AC026271.5-201ENST00000577873 130 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 AC120024.3-201ENST00000603167 156 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 U6.73-201ENST00000619194 103 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 AC006435.5-201ENST00000624486 112 ntBASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.89□□□□□ -2.11
CAPRIN2Q6IMN6 Y_RNA.91-201ENST00000363042 107 ntBASIC1.88□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-1209P-201ENST00000363655 107 ntBASIC1.88□□□□□ -2.11
CAPRIN2Q6IMN6 RNU4-13P-201ENST00000364019 141 ntBASIC1.88□□□□□ -2.11
CAPRIN2Q6IMN6 Y_RNA.203-201ENST00000364106 102 ntBASIC1.88□□□□□ -2.11
CAPRIN2Q6IMN6 MIR1262-201ENST00000408276 93 ntBASIC1.88□□□□□ -2.11
CAPRIN2Q6IMN6 RPL30P13-201ENST00000418873 348 ntBASIC1.88□□□□□ -2.11
CAPRIN2Q6IMN6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.88□□□□□ -2.11
CAPRIN2Q6IMN6 SNORD11-201ENST00000459124 84 ntBASIC1.88□□□□□ -2.11
CAPRIN2Q6IMN6 AC011406.1-201ENST00000512440 370 ntBASIC1.88□□□□□ -2.11
CAPRIN2Q6IMN6 RPL23AP91-201ENST00000569211 455 ntBASIC1.88□□□□□ -2.11
CAPRIN2Q6IMN6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-199P-201ENST00000362954 107 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 RNU1-96P-201ENST00000364163 162 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-978P-201ENST00000364371 103 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 Y_RNA.294-201ENST00000364916 102 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 Y_RNA.393-201ENST00000383936 102 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 Y_RNA.521-201ENST00000384560 114 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-160P-201ENST00000384591 107 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 SNORD37.2-201ENST00000391075 66 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 MIR513C-201ENST00000401352 84 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-1186P-201ENST00000410429 97 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 AL158823.1-201ENST00000418441 478 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 RPL23AP6-201ENST00000446637 472 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-1211P-201ENST00000459179 105 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-1041P-201ENST00000516254 102 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 AC011604.1-201ENST00000545978 196 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 AC073413.2-201ENST00000604332 360 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 MIR8070-201ENST00000616510 88 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 MIR6844-201ENST00000637122 62 ntBASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
CAPRIN2Q6IMN6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-508P-201ENST00000363231 103 ntBASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 RNY1P10-201ENST00000363268 113 ntBASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 RNY3P5-201ENST00000384127 102 ntBASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 Y_RNA.466-201ENST00000384294 113 ntBASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-376P-201ENST00000384731 106 ntBASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 SNORA40.18-201ENST00000391200 128 ntBASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 AL117342.1-201ENST00000404861 406 ntBASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 NDUFA4P2-201ENST00000489989 244 ntBASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-313P-201ENST00000516317 112 ntBASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-62P-201ENST00000516526 102 ntBASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-1096P-201ENST00000517089 102 ntBASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 AC091178.2-201ENST00000584401 117 ntBASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.86□□□□□ -2.11
CAPRIN2Q6IMN6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 snoU2-30.2-201ENST00000362805 70 ntBASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 RNA5SP496-201ENST00000391240 109 ntBASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 MIR1253-201ENST00000408273 105 ntBASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 RPS27P1-201ENST00000450552 247 ntBASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 RNU1-131P-201ENST00000458943 161 ntBASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 SNORD77.4-201ENST00000516158 81 ntBASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-1333P-201ENST00000516162 93 ntBASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-1146P-201ENST00000516282 102 ntBASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 MIR378D2-201ENST00000580636 98 ntBASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 uc_338.4-201ENST00000616635 176 ntBASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 MIR338-201ENST00000636369 67 ntBASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CAPRIN2Q6IMN6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 Y_RNA.127-201ENST00000363386 109 ntBASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 RNA5SP205-201ENST00000364653 136 ntBASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 MIR562-201ENST00000384894 95 ntBASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 MIR29C-201ENST00000385231 88 ntBASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 HMGN2P39-201ENST00000398005 273 ntBASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 MTATP6P29-201ENST00000415057 132 ntBASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 RNU7-107P-201ENST00000459121 61 ntBASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 Y_RNA.686-201ENST00000516548 134 ntBASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-1291P-201ENST00000516591 104 ntBASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 RNU6-197P-201ENST00000516680 100 ntBASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 RNU2-56P-201ENST00000516826 190 ntBASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 MIR3646-201ENST00000578301 84 ntBASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.84□□□□□ -2.11
CAPRIN2Q6IMN6 AC022513.1-201ENST00000624512 117 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 237.7 ms