Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 MIR5009-201ENST00000578736 100 ntBASIC3.07□□□□□ -1.92
ECM1Q16610 MIR4762-201ENST00000585261 75 ntBASIC3.07□□□□□ -1.92
ECM1Q16610 AL365205.2-201ENST00000594586 68 ntBASIC3.07□□□□□ -1.92
ECM1Q16610 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ECM1Q16610 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ECM1Q16610 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ECM1Q16610 MIR302B-201ENST00000362188 73 ntBASIC3.06□□□□□ -1.92
ECM1Q16610 Y_RNA.336-201ENST00000365307 109 ntBASIC3.06□□□□□ -1.92
ECM1Q16610 RNU6-1292P-201ENST00000383856 107 ntBASIC3.06□□□□□ -1.92
ECM1Q16610 Y_RNA.510-201ENST00000384511 114 ntBASIC3.06□□□□□ -1.92
ECM1Q16610 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.06□□□□□ -1.92
ECM1Q16610 SNRPGP13-201ENST00000442212 177 ntBASIC3.06□□□□□ -1.92
ECM1Q16610 PGBD4P5-201ENST00000445958 426 ntBASIC3.06□□□□□ -1.92
ECM1Q16610 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.06□□□□□ -1.92
ECM1Q16610 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.06□□□□□ -1.92
ECM1Q16610 MIR7106-201ENST00000612419 65 ntBASIC3.06□□□□□ -1.92
ECM1Q16610 MIR6852-201ENST00000621699 66 ntBASIC3.06□□□□□ -1.92
ECM1Q16610 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ECM1Q16610 AL589743.1-201ENST00000551932 2712 ntBASIC3.06□□□□□ -1.92
ECM1Q16610 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ECM1Q16610 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
ECM1Q16610 Y_RNA.17-201ENST00000362433 111 ntBASIC3.05□□□□□ -1.92
ECM1Q16610 U8.5-201ENST00000364528 136 ntBASIC3.05□□□□□ -1.92
ECM1Q16610 RNU1-51P-201ENST00000365345 176 ntBASIC3.05□□□□□ -1.92
ECM1Q16610 RNA5SP492-201ENST00000411330 114 ntBASIC3.05□□□□□ -1.92
ECM1Q16610 AC099677.2-201ENST00000436385 175 ntBASIC3.05□□□□□ -1.92
ECM1Q16610 AC105272.1-201ENST00000438604 198 ntBASIC3.05□□□□□ -1.92
ECM1Q16610 AC108938.1-201ENST00000451204 136 ntBASIC3.05□□□□□ -1.92
ECM1Q16610 TRBV12-1-201ENST00000479785 344 ntBASIC3.05□□□□□ -1.92
ECM1Q16610 RNU6-693P-201ENST00000516134 107 ntBASIC3.05□□□□□ -1.92
ECM1Q16610 RNU6-113P-201ENST00000516653 101 ntBASIC3.05□□□□□ -1.92
ECM1Q16610 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.05□□□□□ -1.92
ECM1Q16610 U1.36-201ENST00000620684 176 ntBASIC3.05□□□□□ -1.92
ECM1Q16610 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ECM1Q16610 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ECM1Q16610 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
ECM1Q16610 AC093010.3-201ENST00000570269 15214 ntBASIC3.04□□□□□ -1.92
ECM1Q16610 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
ECM1Q16610 SNORA33-201ENST00000363664 130 ntBASIC3.04□□□□□ -1.92
ECM1Q16610 RNU6-279P-201ENST00000391297 101 ntBASIC3.04□□□□□ -1.92
ECM1Q16610 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.04□□□□□ -1.92
ECM1Q16610 RNU6-893P-201ENST00000458841 100 ntBASIC3.04□□□□□ -1.92
ECM1Q16610 AC007751.1-201ENST00000529260 376 ntBASIC3.04□□□□□ -1.92
ECM1Q16610 AC084364.2-201ENST00000546924 395 ntBASIC3.04□□□□□ -1.92
ECM1Q16610 GTF3AP2-201ENST00000557014 266 ntBASIC3.04□□□□□ -1.92
ECM1Q16610 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.04□□□□□ -1.92
ECM1Q16610 AC006023.1-201ENST00000603944 259 ntBASIC3.04□□□□□ -1.92
ECM1Q16610 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ECM1Q16610 MIR26A1-201ENST00000362205 77 ntBASIC3.03□□□□□ -1.92
ECM1Q16610 Y_RNA.66-201ENST00000362862 102 ntBASIC3.03□□□□□ -1.92
ECM1Q16610 RNU6-888P-201ENST00000363010 101 ntBASIC3.03□□□□□ -1.92
ECM1Q16610 Y_RNA.93-201ENST00000363066 109 ntBASIC3.03□□□□□ -1.92
ECM1Q16610 RNU6-1134P-201ENST00000365156 101 ntBASIC3.03□□□□□ -1.92
ECM1Q16610 Y_RNA.362-201ENST00000365518 110 ntBASIC3.03□□□□□ -1.92
ECM1Q16610 AL034345.1-201ENST00000407768 123 ntBASIC3.03□□□□□ -1.92
ECM1Q16610 RNA5SP21-201ENST00000410917 96 ntBASIC3.03□□□□□ -1.92
ECM1Q16610 RNA5SP270-201ENST00000411361 118 ntBASIC3.03□□□□□ -1.92
ECM1Q16610 BX510359.4-201ENST00000423750 193 ntBASIC3.03□□□□□ -1.92
ECM1Q16610 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.03□□□□□ -1.92
ECM1Q16610 AC068339.1-201ENST00000526965 141 ntBASIC3.03□□□□□ -1.92
ECM1Q16610 MIR3605-201ENST00000583214 100 ntBASIC3.03□□□□□ -1.92
ECM1Q16610 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.03□□□□□ -1.92
ECM1Q16610 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.03□□□□□ -1.92
ECM1Q16610 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ECM1Q16610 Y_RNA.107-201ENST00000363190 121 ntBASIC3.02□□□□□ -1.93
ECM1Q16610 SNORA5B-201ENST00000363786 132 ntBASIC3.02□□□□□ -1.93
ECM1Q16610 Y_RNA.198-201ENST00000364013 98 ntBASIC3.02□□□□□ -1.93
ECM1Q16610 MIR9-1-201ENST00000385198 89 ntBASIC3.02□□□□□ -1.93
ECM1Q16610 SNORA11.2-201ENST00000408318 127 ntBASIC3.02□□□□□ -1.93
ECM1Q16610 RNU2-7P-201ENST00000410794 178 ntBASIC3.02□□□□□ -1.93
ECM1Q16610 MIR5094-201ENST00000578766 85 ntBASIC3.02□□□□□ -1.93
ECM1Q16610 AL137067.1-201ENST00000615933 120 ntBASIC3.02□□□□□ -1.93
ECM1Q16610 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ECM1Q16610 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.02□□□□□ -1.93
ECM1Q16610 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
ECM1Q16610 AL161431.1-201ENST00000618966 4205 ntBASIC3.01□□□□□ -1.93
ECM1Q16610 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
ECM1Q16610 Y_RNA.366-201ENST00000365540 102 ntBASIC3.01□□□□□ -1.93
ECM1Q16610 Y_RNA.500-201ENST00000384466 111 ntBASIC3.01□□□□□ -1.93
ECM1Q16610 AC022137.1-201ENST00000483735 151 ntBASIC3.01□□□□□ -1.93
ECM1Q16610 MIR8054-201ENST00000620877 86 ntBASIC3.01□□□□□ -1.93
ECM1Q16610 RNY4P6-201ENST00000363667 96 ntBASIC3□□□□□ -1.93
ECM1Q16610 Y_RNA.410-201ENST00000383992 113 ntBASIC3□□□□□ -1.93
ECM1Q16610 RPL39P39-201ENST00000455840 151 ntBASIC3□□□□□ -1.93
ECM1Q16610 AC096725.1-201ENST00000514266 313 ntBASIC3□□□□□ -1.93
ECM1Q16610 SNORA9.3-201ENST00000516383 129 ntBASIC3□□□□□ -1.93
ECM1Q16610 SNORD45.4-201ENST00000516629 73 ntBASIC3□□□□□ -1.93
ECM1Q16610 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3□□□□□ -1.93
ECM1Q16610 ELOCP29-201ENST00000588193 334 ntBASIC3□□□□□ -1.93
ECM1Q16610 AC078899.2-201ENST00000595282 212 ntBASIC3□□□□□ -1.93
ECM1Q16610 AC006441.5-201ENST00000612680 209 ntBASIC3□□□□□ -1.93
ECM1Q16610 AC022202.1-201ENST00000613515 211 ntBASIC3□□□□□ -1.93
ECM1Q16610 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ECM1Q16610 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ECM1Q16610 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ECM1Q16610 SNORD61-201ENST00000384252 73 ntBASIC2.99□□□□□ -1.93
ECM1Q16610 SNORD38C-201ENST00000384381 69 ntBASIC2.99□□□□□ -1.93
ECM1Q16610 SNORA80E-201ENST00000384744 137 ntBASIC2.99□□□□□ -1.93
ECM1Q16610 MIR518A2-201ENST00000384966 87 ntBASIC2.99□□□□□ -1.93
ECM1Q16610 MT-TI-201ENST00000387365 69 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms