Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 RNA5SP437-201ENST00000517249 129 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 AL160236.1-201ENST00000556317 195 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 MIR5002-201ENST00000584713 97 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.96□□□□□ -2.1
E2F1Q01094 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.96□□□□□ -2.1
E2F1Q01094 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
E2F1Q01094 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
E2F1Q01094 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.95□□□□□ -2.1
E2F1Q01094 Y_RNA.8-201ENST00000362353 102 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 Y_RNA.265-201ENST00000364677 108 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 Y_RNA.291-201ENST00000364886 113 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 SNORA4.2-201ENST00000365313 147 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 RNU6-1130P-201ENST00000365434 107 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 Y_RNA.432-201ENST00000384087 111 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 SNORA40.18-201ENST00000391200 128 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 RNA5SP100-201ENST00000410903 110 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 RNA5SP59-201ENST00000410922 110 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.95□□□□□ -2.1
E2F1Q01094 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.95□□□□□ -2.1
E2F1Q01094 RNU7-200P-201ENST00000516105 62 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 RNU6-1299P-201ENST00000516316 100 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 RNU6-789P-201ENST00000517105 102 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.95□□□□□ -2.1
E2F1Q01094 AC008507.4-201ENST00000585464 127 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 AC087685.1-201ENST00000587507 141 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 Y_RNA.783-201ENST00000613546 102 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.95□□□□□ -2.1
E2F1Q01094 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
E2F1Q01094 SNORD68-201ENST00000363214 84 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 SNORA16B-201ENST00000364674 135 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 RNY1P5-201ENST00000383890 115 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 SNORD116-18-201ENST00000383961 92 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 RNU6-950P-201ENST00000384651 107 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 MIR17-201ENST00000385012 84 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 RNU6-131P-201ENST00000391144 107 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 RNA5SP247-201ENST00000411181 105 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 AC006461.1-201ENST00000412637 326 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 AL158823.1-201ENST00000418441 478 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.94□□□□□ -2.1
E2F1Q01094 CYCSP49-201ENST00000420810 319 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 AL445685.2-201ENST00000422551 342 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 STAG3L5P-204ENST00000443759 179 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 RPL23AP63-201ENST00000498752 471 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 AC108729.3-201ENST00000513484 108 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 RNA5SP153-201ENST00000516498 76 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 RNU6-197P-201ENST00000516680 100 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 Y_RNA.703-201ENST00000516846 111 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 Y_RNA.714-201ENST00000517065 90 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 MIR4662B-201ENST00000579498 81 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 AC078899.2-201ENST00000595282 212 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 AC097639.2-201ENST00000603159 172 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 SNORA28-201ENST00000606769 126 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 MTND1P7-201ENST00000632801 297 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.94□□□□□ -2.1
E2F1Q01094 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.94□□□□□ -2.1
E2F1Q01094 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
E2F1Q01094 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
E2F1Q01094 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
E2F1Q01094 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
E2F1Q01094 RNA5SP138-201ENST00000365098 114 ntBASIC1.93□□□□□ -2.1
E2F1Q01094 RNU6-449P-201ENST00000383914 107 ntBASIC1.93□□□□□ -2.1
E2F1Q01094 SNORA79-201ENST00000408376 140 ntBASIC1.93□□□□□ -2.1
E2F1Q01094 RN7SKP200-201ENST00000410564 320 ntBASIC1.93□□□□□ -2.1
E2F1Q01094 MLLT10P1-201ENST00000418346 262 ntBASIC1.93□□□□□ -2.1
E2F1Q01094 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.93□□□□□ -2.1
E2F1Q01094 MRPS17P9-201ENST00000511924 393 ntBASIC1.93□□□□□ -2.1
E2F1Q01094 RNU6-126P-201ENST00000516685 103 ntBASIC1.93□□□□□ -2.1
E2F1Q01094 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
E2F1Q01094 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
E2F1Q01094 Pinc.1-201ENST00000616452 154 ntBASIC1.93□□□□□ -2.1
E2F1Q01094 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.93□□□□□ -2.1
E2F1Q01094 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
E2F1Q01094 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
E2F1Q01094 SNORD72-201ENST00000390994 80 ntBASIC1.92□□□□□ -2.1
E2F1Q01094 RNU2-7P-201ENST00000410794 178 ntBASIC1.92□□□□□ -2.1
E2F1Q01094 AL021397.1-201ENST00000451806 248 ntBASIC1.92□□□□□ -2.1
E2F1Q01094 RNA5SP481-201ENST00000516814 122 ntBASIC1.92□□□□□ -2.1
E2F1Q01094 MIR4498-201ENST00000577599 66 ntBASIC1.92□□□□□ -2.1
E2F1Q01094 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.92□□□□□ -2.1
E2F1Q01094 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
E2F1Q01094 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.91□□□□□ -2.1
E2F1Q01094 Y_RNA.4-201ENST00000362333 112 ntBASIC1.91□□□□□ -2.1
E2F1Q01094 Y_RNA.91-201ENST00000363042 107 ntBASIC1.91□□□□□ -2.1
E2F1Q01094 Y_RNA.634-201ENST00000364811 113 ntBASIC1.91□□□□□ -2.1
E2F1Q01094 Y_RNA.337-201ENST00000365312 102 ntBASIC1.91□□□□□ -2.1
E2F1Q01094 Y_RNA.486-201ENST00000384398 107 ntBASIC1.91□□□□□ -2.1
E2F1Q01094 AL034345.1-201ENST00000407768 123 ntBASIC1.91□□□□□ -2.1
E2F1Q01094 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.91□□□□□ -2.1
E2F1Q01094 RNU6-1053P-201ENST00000515930 101 ntBASIC1.91□□□□□ -2.1
E2F1Q01094 RNA5SP272-201ENST00000516095 111 ntBASIC1.91□□□□□ -2.1
E2F1Q01094 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.91□□□□□ -2.1
E2F1Q01094 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.91□□□□□ -2.1
E2F1Q01094 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
E2F1Q01094 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
E2F1Q01094 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
E2F1Q01094 MIRLET7C-201ENST00000362160 84 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms