Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL359851.1-201ENST00000569460 4997 ntBASIC1.79□□□□□ -2.12
RAE1P78406 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RAE1P78406 MIR424-201ENST00000362227 98 ntBASIC1.78□□□□□ -2.12
RAE1P78406 RNU6-1084P-201ENST00000362498 107 ntBASIC1.78□□□□□ -2.12
RAE1P78406 Y_RNA.336-201ENST00000365307 109 ntBASIC1.78□□□□□ -2.12
RAE1P78406 RNU4-52P-201ENST00000384209 138 ntBASIC1.78□□□□□ -2.12
RAE1P78406 MIR660-201ENST00000385235 97 ntBASIC1.78□□□□□ -2.12
RAE1P78406 SNORA26-201ENST00000391286 122 ntBASIC1.78□□□□□ -2.12
RAE1P78406 RN7SKP192-201ENST00000411291 327 ntBASIC1.78□□□□□ -2.12
RAE1P78406 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.78□□□□□ -2.12
RAE1P78406 SEPT7P4-201ENST00000437076 306 ntBASIC1.78□□□□□ -2.12
RAE1P78406 PGBD4P5-201ENST00000445958 426 ntBASIC1.78□□□□□ -2.12
RAE1P78406 SNORD45.4-201ENST00000516629 73 ntBASIC1.78□□□□□ -2.12
RAE1P78406 RNU6-197P-201ENST00000516680 100 ntBASIC1.78□□□□□ -2.12
RAE1P78406 AL096840.1-201ENST00000603287 93 ntBASIC1.78□□□□□ -2.12
RAE1P78406 Pinc.1-201ENST00000616452 154 ntBASIC1.78□□□□□ -2.12
RAE1P78406 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RAE1P78406 RNU6-1123P-201ENST00000362347 106 ntBASIC1.77□□□□□ -2.13
RAE1P78406 RNU6-442P-201ENST00000383968 104 ntBASIC1.77□□□□□ -2.13
RAE1P78406 Y_RNA.464-201ENST00000384282 110 ntBASIC1.77□□□□□ -2.13
RAE1P78406 RNU6-163P-201ENST00000384396 106 ntBASIC1.77□□□□□ -2.13
RAE1P78406 MIR802-201ENST00000390235 94 ntBASIC1.77□□□□□ -2.13
RAE1P78406 RNU6-1135P-201ENST00000411083 103 ntBASIC1.77□□□□□ -2.13
RAE1P78406 HMGN2P19-201ENST00000425149 265 ntBASIC1.77□□□□□ -2.13
RAE1P78406 AC003989.2-201ENST00000440224 169 ntBASIC1.77□□□□□ -2.13
RAE1P78406 AC114811.1-201ENST00000507207 168 ntBASIC1.77□□□□□ -2.13
RAE1P78406 AC107027.2-201ENST00000512197 115 ntBASIC1.77□□□□□ -2.13
RAE1P78406 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.77□□□□□ -2.13
RAE1P78406 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.77□□□□□ -2.13
RAE1P78406 MIR4448-201ENST00000584360 86 ntBASIC1.77□□□□□ -2.13
RAE1P78406 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.76□□□□□ -2.13
RAE1P78406 RNU6-833P-201ENST00000363486 107 ntBASIC1.76□□□□□ -2.13
RAE1P78406 RNU6-414P-201ENST00000363705 104 ntBASIC1.76□□□□□ -2.13
RAE1P78406 RNU4-84P-201ENST00000364200 139 ntBASIC1.76□□□□□ -2.13
RAE1P78406 Y_RNA.357-201ENST00000365487 109 ntBASIC1.76□□□□□ -2.13
RAE1P78406 RNU6-439P-201ENST00000384188 106 ntBASIC1.76□□□□□ -2.13
RAE1P78406 MIR891A-201ENST00000401237 79 ntBASIC1.76□□□□□ -2.13
RAE1P78406 RNU2-70P-201ENST00000410718 179 ntBASIC1.76□□□□□ -2.13
RAE1P78406 AL161935.2-201ENST00000414627 60 ntBASIC1.76□□□□□ -2.13
RAE1P78406 HMGN2P38-201ENST00000423806 265 ntBASIC1.76□□□□□ -2.13
RAE1P78406 JTBP1-201ENST00000441314 247 ntBASIC1.76□□□□□ -2.13
RAE1P78406 RN7SL274P-201ENST00000492268 272 ntBASIC1.76□□□□□ -2.13
RAE1P78406 RPS29P11-201ENST00000496507 171 ntBASIC1.76□□□□□ -2.13
RAE1P78406 RNU6-1116P-201ENST00000517269 99 ntBASIC1.76□□□□□ -2.13
RAE1P78406 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RAE1P78406 AL442644.1-201ENST00000454390 3105 ntBASIC1.75□□□□□ -2.13
RAE1P78406 Y_RNA.91-201ENST00000363042 107 ntBASIC1.75□□□□□ -2.13
RAE1P78406 U8.2-201ENST00000363156 134 ntBASIC1.75□□□□□ -2.13
RAE1P78406 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
RAE1P78406 Y_RNA.634-201ENST00000364811 113 ntBASIC1.75□□□□□ -2.13
RAE1P78406 Y_RNA.486-201ENST00000384398 107 ntBASIC1.75□□□□□ -2.13
RAE1P78406 MIR194-1-201ENST00000384892 85 ntBASIC1.75□□□□□ -2.13
RAE1P78406 SNRPGP14-201ENST00000435400 219 ntBASIC1.75□□□□□ -2.13
RAE1P78406 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.75□□□□□ -2.13
RAE1P78406 RNU1-41P-201ENST00000516161 162 ntBASIC1.75□□□□□ -2.13
RAE1P78406 RNU1-48P-201ENST00000516400 162 ntBASIC1.75□□□□□ -2.13
RAE1P78406 RNU6-1212P-201ENST00000517023 104 ntBASIC1.75□□□□□ -2.13
RAE1P78406 AC006441.5-201ENST00000612680 209 ntBASIC1.75□□□□□ -2.13
RAE1P78406 SNORD3E-202ENST00000627253 216 ntBASIC1.75□□□□□ -2.13
RAE1P78406 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
RAE1P78406 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.74□□□□□ -2.13
RAE1P78406 Y_RNA.272-201ENST00000364696 102 ntBASIC1.74□□□□□ -2.13
RAE1P78406 SNORD24-201ENST00000383884 75 ntBASIC1.74□□□□□ -2.13
RAE1P78406 RNU6-203P-201ENST00000384038 104 ntBASIC1.74□□□□□ -2.13
RAE1P78406 MIR676-201ENST00000390702 67 ntBASIC1.74□□□□□ -2.13
RAE1P78406 RNU6-239P-201ENST00000390990 99 ntBASIC1.74□□□□□ -2.13
RAE1P78406 RNU6-394P-201ENST00000410735 107 ntBASIC1.74□□□□□ -2.13
RAE1P78406 AC006461.1-201ENST00000412637 326 ntBASIC1.74□□□□□ -2.13
RAE1P78406 RNU7-12P-201ENST00000516030 62 ntBASIC1.74□□□□□ -2.13
RAE1P78406 RNU6-365P-201ENST00000517113 106 ntBASIC1.74□□□□□ -2.13
RAE1P78406 AC103810.8-201ENST00000607347 118 ntBASIC1.74□□□□□ -2.13
RAE1P78406 MIR9-3-201ENST00000385084 90 ntBASIC1.73□□□□□ -2.13
RAE1P78406 MIR1267-201ENST00000408723 78 ntBASIC1.73□□□□□ -2.13
RAE1P78406 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
RAE1P78406 uc_338.20-201ENST00000621563 178 ntBASIC1.73□□□□□ -2.13
RAE1P78406 Y_RNA.66-201ENST00000362862 102 ntBASIC1.72□□□□□ -2.13
RAE1P78406 RNU6-268P-201ENST00000364174 107 ntBASIC1.72□□□□□ -2.13
RAE1P78406 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
RAE1P78406 RNA5SP126-201ENST00000365092 109 ntBASIC1.72□□□□□ -2.13
RAE1P78406 MIR452-201ENST00000385020 85 ntBASIC1.72□□□□□ -2.13
RAE1P78406 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RAE1P78406 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RAE1P78406 AC004965.1-201ENST00000413033 213 ntBASIC1.72□□□□□ -2.13
RAE1P78406 SNRPGP13-201ENST00000442212 177 ntBASIC1.72□□□□□ -2.13
RAE1P78406 RNU6-504P-201ENST00000516568 104 ntBASIC1.72□□□□□ -2.13
RAE1P78406 RNU7-121P-201ENST00000516604 62 ntBASIC1.72□□□□□ -2.13
RAE1P78406 MIR378D2-201ENST00000580636 98 ntBASIC1.72□□□□□ -2.13
RAE1P78406 MIR8074-201ENST00000615081 81 ntBASIC1.72□□□□□ -2.13
RAE1P78406 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
RAE1P78406 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
RAE1P78406 Y_RNA.337-201ENST00000365312 102 ntBASIC1.71□□□□□ -2.14
RAE1P78406 RNU6-1062P-201ENST00000383908 107 ntBASIC1.71□□□□□ -2.14
RAE1P78406 Y_RNA.580-201ENST00000391004 95 ntBASIC1.71□□□□□ -2.14
RAE1P78406 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.71□□□□□ -2.14
RAE1P78406 AL445685.2-201ENST00000422551 342 ntBASIC1.71□□□□□ -2.14
RAE1P78406 RPL23AP42-201ENST00000471152 471 ntBASIC1.71□□□□□ -2.14
RAE1P78406 MIR4778-201ENST00000577635 80 ntBASIC1.71□□□□□ -2.14
RAE1P78406 MIR3144-201ENST00000579460 79 ntBASIC1.71□□□□□ -2.14
RAE1P78406 AC095038.3-201ENST00000634439 195 ntBASIC1.71□□□□□ -2.14
RAE1P78406 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms