| WNT4 | P56705 | KTN1-205 | ENST00000395314 | 4618 nt | APPRIS P4 TSL 1 (best) BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MIR367-201 | ENST00000362299 | 68 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU6-1123P-201 | ENST00000362347 | 106 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | U8.5-201 | ENST00000364528 | 136 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU6-923P-201 | ENST00000364753 | 107 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | SNORA25.8-201 | ENST00000364831 | 128 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.352-201 | ENST00000365439 | 102 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | SNORD41-201 | ENST00000386967 | 70 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MIR1289-2-201 | ENST00000408360 | 111 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MIR1298-201 | ENST00000408783 | 112 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AC100767.1-201 | ENST00000528178 | 123 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AL358944.1-201 | ENST00000528537 | 144 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | FAM106DP-201 | ENST00000586416 | 501 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AC006006.1-201 | ENST00000603082 | 144 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | JPX_2.1-201 | ENST00000614161 | 69 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AL365265.1-201 | ENST00000621045 | 234 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | KCNQ1OT1_5.1-201 | ENST00000621902 | 226 nt | BASIC | 1 | □□□□□ -2.25 | | |
| WNT4 | P56705 | ABCA5-201 | ENST00000392676 | 8220 nt | APPRIS P1 TSL 1 (best) BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | ZNF518A-210 | ENST00000624776 | 7994 nt | APPRIS P1 TSL 1 (best) BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | C9orf84-201 | ENST00000318737 | 4661 nt | APPRIS P3 TSL 1 (best) BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU6-199P-201 | ENST00000362954 | 107 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.82-201 | ENST00000363000 | 102 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.92-201 | ENST00000363043 | 102 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.229-201 | ENST00000364347 | 113 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.235-201 | ENST00000364412 | 102 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.292-201 | ENST00000364904 | 97 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.306-201 | ENST00000365015 | 102 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.308-201 | ENST00000365043 | 101 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.312-201 | ENST00000365089 | 102 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.322-201 | ENST00000365151 | 102 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | SNORA22-201 | ENST00000383907 | 134 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | SNORA22C-201 | ENST00000384614 | 134 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU6-493P-201 | ENST00000391321 | 108 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AL353742.1-201 | ENST00000453455 | 224 nt | TSL 3 BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.650-201 | ENST00000459002 | 102 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | OR2A41P-201 | ENST00000473586 | 105 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | CYCTP-201 | ENST00000504253 | 315 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AC079140.2-201 | ENST00000506193 | 142 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU6-561P-201 | ENST00000516222 | 102 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU7-28P-201 | ENST00000516759 | 62 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.777-201 | ENST00000516982 | 102 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AC090142.3-201 | ENST00000519012 | 385 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AC032019.2-201 | ENST00000584916 | 403 nt | TSL 5 BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MIR4762-201 | ENST00000585261 | 75 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.771-201 | ENST00000598668 | 102 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.789-201 | ENST00000622480 | 102 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | U6.104-201 | ENST00000637979 | 90 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| WNT4 | P56705 | BRCA1-202 | ENST00000354071 | 4497 nt | TSL 1 (best) BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU6-653P-201 | ENST00000363074 | 106 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU6-674P-201 | ENST00000363831 | 107 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MIR562-201 | ENST00000384894 | 95 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MIR618-201 | ENST00000385287 | 98 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU6-1228P-201 | ENST00000391014 | 107 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.587-201 | ENST00000391210 | 103 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MIR891A-201 | ENST00000401237 | 79 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | FTH1P12-201 | ENST00000432137 | 551 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AC027119.1-201 | ENST00000440877 | 241 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.638-201 | ENST00000459374 | 113 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU6-165P-201 | ENST00000517170 | 99 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MIR4724-201 | ENST00000579485 | 89 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MIR4303-201 | ENST00000581299 | 66 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MIR4282-201 | ENST00000583613 | 67 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AC103810.9-201 | ENST00000606688 | 112 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AL021707.8-201 | ENST00000609428 | 183 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AL442067.1-201 | ENST00000613261 | 223 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.802-201 | ENST00000614892 | 130 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AC078938.1-201 | ENST00000620993 | 318 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MT-ATP8-201 | ENST00000361851 | 207 nt | APPRIS P1 BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MIR570-201 | ENST00000384917 | 97 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MIR626-201 | ENST00000385032 | 94 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU11-5P-201 | ENST00000391216 | 129 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.622-201 | ENST00000411091 | 108 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | SNORA59A-201 | ENST00000459326 | 152 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU6-947P-201 | ENST00000516264 | 106 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU6-1007P-201 | ENST00000516586 | 107 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU7-149P-201 | ENST00000516739 | 59 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | RNU6-548P-201 | ENST00000517083 | 115 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | DNAJC19P9-201 | ENST00000555084 | 351 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | CYP3A52P-201 | ENST00000563326 | 91 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AC138625.2-201 | ENST00000563968 | 551 nt | TSL 3 BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | MIR4421-201 | ENST00000578133 | 69 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | AC008507.4-201 | ENST00000585464 | 127 nt | BASIC | 0.97 | □□□□□ -2.25 | | |
| WNT4 | P56705 | Y_RNA.20-201 | ENST00000362479 | 113 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | RNU6-833P-201 | ENST00000363486 | 107 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | snoU2-30.1-201 | ENST00000365012 | 70 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | Y_RNA.556-201 | ENST00000384677 | 113 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | SNORA8.3-201 | ENST00000384679 | 139 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | SNORD28B-201 | ENST00000390993 | 75 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | MIR548H3-201 | ENST00000408771 | 118 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | SNRPGP14-201 | ENST00000435400 | 219 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | snoU13.25-201 | ENST00000458945 | 104 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | snoU13.26-201 | ENST00000459452 | 105 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | RPL23AP94-201 | ENST00000512518 | 302 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | Y_RNA.666-201 | ENST00000516187 | 112 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | SNORA18.7-201 | ENST00000516910 | 131 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | RNU6-388P-201 | ENST00000517012 | 105 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | RNU6-389P-201 | ENST00000517048 | 105 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | RNU6-1271P-201 | ENST00000517049 | 105 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | AL512310.8-201 | ENST00000550183 | 120 nt | BASIC | 0.96 | □□□□□ -2.26 | | |
| WNT4 | P56705 | LINC02277-202 | ENST00000556472 | 453 nt | TSL 3 BASIC | 0.96 | □□□□□ -2.26 | | |