Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.33□□□□□ -2.04
GFRA1P56159 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
GFRA1P56159 Y_RNA.37-201ENST00000362606 108 ntBASIC2.32□□□□□ -2.04
GFRA1P56159 RNU6-1189P-201ENST00000383958 107 ntBASIC2.32□□□□□ -2.04
GFRA1P56159 SNORA11.2-201ENST00000408318 127 ntBASIC2.32□□□□□ -2.04
GFRA1P56159 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.32□□□□□ -2.04
GFRA1P56159 RNU5E-3P-201ENST00000515913 68 ntBASIC2.32□□□□□ -2.04
GFRA1P56159 RNU2-60P-201ENST00000517290 128 ntBASIC2.32□□□□□ -2.04
GFRA1P56159 MTND5P32-201ENST00000560711 1802 ntBASIC2.32□□□□□ -2.04
GFRA1P56159 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
GFRA1P56159 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
GFRA1P56159 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.31□□□□□ -2.04
GFRA1P56159 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
GFRA1P56159 MIR449A-201ENST00000362113 91 ntBASIC2.31□□□□□ -2.04
GFRA1P56159 MIR27B-201ENST00000385129 97 ntBASIC2.31□□□□□ -2.04
GFRA1P56159 HMGN2P35-201ENST00000412164 270 ntBASIC2.31□□□□□ -2.04
GFRA1P56159 AC015922.2-201ENST00000435593 184 ntBASIC2.31□□□□□ -2.04
GFRA1P56159 AC087499.4-201ENST00000448505 178 ntBASIC2.31□□□□□ -2.04
GFRA1P56159 RN7SKP179-201ENST00000516126 217 ntBASIC2.31□□□□□ -2.04
GFRA1P56159 RNA5SP148-201ENST00000516527 94 ntBASIC2.31□□□□□ -2.04
GFRA1P56159 RNU6-1149P-201ENST00000516810 97 ntBASIC2.31□□□□□ -2.04
GFRA1P56159 SNORA31.17-201ENST00000516953 127 ntBASIC2.31□□□□□ -2.04
GFRA1P56159 AC090049.2-201ENST00000550377 109 ntBASIC2.31□□□□□ -2.04
GFRA1P56159 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.31□□□□□ -2.04
GFRA1P56159 Y_RNA.294-201ENST00000364916 102 ntBASIC2.3□□□□□ -2.04
GFRA1P56159 MIR452-201ENST00000385020 85 ntBASIC2.3□□□□□ -2.04
GFRA1P56159 PGBD4P5-201ENST00000445958 426 ntBASIC2.3□□□□□ -2.04
GFRA1P56159 RNA5SP320-201ENST00000516263 124 ntBASIC2.3□□□□□ -2.04
GFRA1P56159 RNU6-826P-201ENST00000516827 104 ntBASIC2.3□□□□□ -2.04
GFRA1P56159 MIR3121-201ENST00000579680 77 ntBASIC2.3□□□□□ -2.04
GFRA1P56159 AL359881.1-201ENST00000602916 267 ntBASIC2.3□□□□□ -2.04
GFRA1P56159 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
GFRA1P56159 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
GFRA1P56159 RNA5SP393-201ENST00000363423 117 ntBASIC2.29□□□□□ -2.04
GFRA1P56159 Y_RNA.261-201ENST00000364631 102 ntBASIC2.29□□□□□ -2.04
GFRA1P56159 MIR660-201ENST00000385235 97 ntBASIC2.29□□□□□ -2.04
GFRA1P56159 RNU6-360P-201ENST00000390944 104 ntBASIC2.29□□□□□ -2.04
GFRA1P56159 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.29□□□□□ -2.04
GFRA1P56159 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.29□□□□□ -2.04
GFRA1P56159 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.29□□□□□ -2.04
GFRA1P56159 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.29□□□□□ -2.04
GFRA1P56159 AL022345.2-201ENST00000606307 135 ntBASIC2.29□□□□□ -2.04
GFRA1P56159 SNORD3E-202ENST00000627253 216 ntBASIC2.29□□□□□ -2.04
GFRA1P56159 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.29□□□□□ -2.04
GFRA1P56159 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
GFRA1P56159 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
GFRA1P56159 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.28□□□□□ -2.04
GFRA1P56159 RNU4-82P-201ENST00000362443 140 ntBASIC2.28□□□□□ -2.04
GFRA1P56159 Y_RNA.114-201ENST00000363265 113 ntBASIC2.28□□□□□ -2.04
GFRA1P56159 SNORA25.6-201ENST00000364121 118 ntBASIC2.28□□□□□ -2.04
GFRA1P56159 RNU6-309P-201ENST00000364573 106 ntBASIC2.28□□□□□ -2.04
GFRA1P56159 RNA5SP205-201ENST00000364653 136 ntBASIC2.28□□□□□ -2.04
GFRA1P56159 SNORA2.2-201ENST00000365473 135 ntBASIC2.28□□□□□ -2.04
GFRA1P56159 SNORA67.4-201ENST00000384688 142 ntBASIC2.28□□□□□ -2.04
GFRA1P56159 AL513328.1-201ENST00000446460 224 ntBASIC2.28□□□□□ -2.04
GFRA1P56159 AC099513.1-201ENST00000490423 301 ntBASIC2.28□□□□□ -2.04
GFRA1P56159 RNU7-70P-201ENST00000516941 66 ntBASIC2.28□□□□□ -2.04
GFRA1P56159 AP003484.1-201ENST00000530974 250 ntBASIC2.28□□□□□ -2.04
GFRA1P56159 U4.3-201ENST00000621047 82 ntBASIC2.28□□□□□ -2.04
GFRA1P56159 RNU6-235P-201ENST00000362644 107 ntBASIC2.27□□□□□ -2.05
GFRA1P56159 RNU6-647P-201ENST00000364243 107 ntBASIC2.27□□□□□ -2.05
GFRA1P56159 RNA5SP210-201ENST00000391034 120 ntBASIC2.27□□□□□ -2.05
GFRA1P56159 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.27□□□□□ -2.05
GFRA1P56159 AL158147.1-201ENST00000443970 75 ntBASIC2.27□□□□□ -2.05
GFRA1P56159 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.27□□□□□ -2.05
GFRA1P56159 RNA5SP236-201ENST00000516169 116 ntBASIC2.27□□□□□ -2.05
GFRA1P56159 RNU6-830P-201ENST00000516353 107 ntBASIC2.27□□□□□ -2.05
GFRA1P56159 RNU6-659P-201ENST00000516454 104 ntBASIC2.27□□□□□ -2.05
GFRA1P56159 SNORD36C-201ENST00000516733 66 ntBASIC2.27□□□□□ -2.05
GFRA1P56159 SNORA18.7-201ENST00000516910 131 ntBASIC2.27□□□□□ -2.05
GFRA1P56159 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.27□□□□□ -2.05
GFRA1P56159 MIR5092-201ENST00000583139 88 ntBASIC2.27□□□□□ -2.05
GFRA1P56159 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.27□□□□□ -2.05
GFRA1P56159 AC008555.8-201ENST00000623602 2168 ntBASIC2.26□□□□□ -2.05
GFRA1P56159 MIR424-201ENST00000362227 98 ntBASIC2.26□□□□□ -2.05
GFRA1P56159 RNA5SP276-201ENST00000362580 94 ntBASIC2.26□□□□□ -2.05
GFRA1P56159 SCARNA15-202ENST00000516881 127 ntBASIC2.26□□□□□ -2.05
GFRA1P56159 MIR376A2-201ENST00000636782 80 ntBASIC2.26□□□□□ -2.05
GFRA1P56159 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
GFRA1P56159 RNU6-1290P-201ENST00000362957 109 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 RNA5SP456-201ENST00000364002 114 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 Y_RNA.280-201ENST00000364765 112 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 MIR516B2-201ENST00000385190 85 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 MIR136-201ENST00000385207 82 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 RNA5SP212-201ENST00000391223 107 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.25□□□□□ -2.05
GFRA1P56159 AC011753.1-201ENST00000451001 220 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 AC093850.1-201ENST00000454121 251 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 RNU7-107P-201ENST00000459121 61 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 RNU6-113P-201ENST00000516653 101 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 AC133485.4-201ENST00000561835 220 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 AC138907.4-201ENST00000570107 226 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 MIR4778-201ENST00000577635 80 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 MIR3670-2-201ENST00000582974 65 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 MIR3670-1-201ENST00000584160 65 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 MIR3670-3-201ENST00000584855 65 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 MIR3670-4-201ENST00000612260 65 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.25□□□□□ -2.05
GFRA1P56159 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
GFRA1P56159 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms