Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
LIM2P55344 PMCHL1-202ENST00000423102 261 ntBASIC0.75□□□□□ -2.29
LIM2P55344 NDUFA4P2-201ENST00000489989 244 ntBASIC0.75□□□□□ -2.29
LIM2P55344 PDCD5P2-201ENST00000507570 312 ntBASIC0.75□□□□□ -2.29
LIM2P55344 RN7SKP164-201ENST00000516138 266 ntBASIC0.75□□□□□ -2.29
LIM2P55344 RNU6-496P-201ENST00000516145 99 ntBASIC0.75□□□□□ -2.29
LIM2P55344 RNU6-988P-201ENST00000519081 107 ntBASIC0.75□□□□□ -2.29
LIM2P55344 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.75□□□□□ -2.29
LIM2P55344 MIR3145-201ENST00000580727 82 ntBASIC0.75□□□□□ -2.29
LIM2P55344 C8orf59P2-201ENST00000603441 271 ntBASIC0.75□□□□□ -2.29
LIM2P55344 AC006441.5-201ENST00000612680 209 ntBASIC0.75□□□□□ -2.29
LIM2P55344 MIR369-201ENST00000362155 70 ntBASIC0.74□□□□□ -2.29
LIM2P55344 SNORD113-8-201ENST00000363497 74 ntBASIC0.74□□□□□ -2.29
LIM2P55344 RNU6-801P-201ENST00000364087 105 ntBASIC0.74□□□□□ -2.29
LIM2P55344 Y_RNA.418-201ENST00000384029 102 ntBASIC0.74□□□□□ -2.29
LIM2P55344 MIR520E-201ENST00000384867 87 ntBASIC0.74□□□□□ -2.29
LIM2P55344 MIR518E-201ENST00000385252 88 ntBASIC0.74□□□□□ -2.29
LIM2P55344 Y_RNA.581-201ENST00000391017 97 ntBASIC0.74□□□□□ -2.29
LIM2P55344 RNU6-823P-201ENST00000391042 103 ntBASIC0.74□□□□□ -2.29
LIM2P55344 Y_RNA.645-201ENST00000391229 102 ntBASIC0.74□□□□□ -2.29
LIM2P55344 RNU6-101P-201ENST00000410323 104 ntBASIC0.74□□□□□ -2.29
LIM2P55344 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.74□□□□□ -2.29
LIM2P55344 SNORD124-201ENST00000459577 104 ntBASIC0.74□□□□□ -2.29
LIM2P55344 Y_RNA.631-201ENST00000459607 101 ntBASIC0.74□□□□□ -2.29
LIM2P55344 RNU7-41P-201ENST00000515917 61 ntBASIC0.74□□□□□ -2.29
LIM2P55344 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.74□□□□□ -2.29
LIM2P55344 AC005357.1-201ENST00000588399 301 ntBASIC0.74□□□□□ -2.29
LIM2P55344 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
LIM2P55344 Pinc.1-201ENST00000616452 154 ntBASIC0.74□□□□□ -2.29
LIM2P55344 AC008133.2-201ENST00000624540 351 ntBASIC0.74□□□□□ -2.29
LIM2P55344 Y_RNA.128-201ENST00000363391 112 ntBASIC0.73□□□□□ -2.29
LIM2P55344 Y_RNA.148-201ENST00000363557 117 ntBASIC0.73□□□□□ -2.29
LIM2P55344 Y_RNA.224-201ENST00000364308 111 ntBASIC0.73□□□□□ -2.29
LIM2P55344 Y_RNA.286-201ENST00000364813 102 ntBASIC0.73□□□□□ -2.29
LIM2P55344 SNORA1.2-201ENST00000365189 134 ntBASIC0.73□□□□□ -2.29
LIM2P55344 MIR1185-1-201ENST00000408598 86 ntBASIC0.73□□□□□ -2.29
LIM2P55344 RNU2-64P-201ENST00000411315 191 ntBASIC0.73□□□□□ -2.29
LIM2P55344 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.73□□□□□ -2.29
LIM2P55344 HSPE1P25-201ENST00000455484 251 ntBASIC0.73□□□□□ -2.29
LIM2P55344 SNORD11-201ENST00000459124 84 ntBASIC0.73□□□□□ -2.29
LIM2P55344 RNU6-1046P-201ENST00000516538 107 ntBASIC0.73□□□□□ -2.29
LIM2P55344 RNU6-897P-201ENST00000517135 105 ntBASIC0.73□□□□□ -2.29
LIM2P55344 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.73□□□□□ -2.29
LIM2P55344 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.73□□□□□ -2.29
LIM2P55344 AC108706.1-201ENST00000611053 297 ntBASIC0.73□□□□□ -2.29
LIM2P55344 Y_RNA.116-201ENST00000363292 103 ntBASIC0.72□□□□□ -2.29
LIM2P55344 RNU6-268P-201ENST00000364174 107 ntBASIC0.72□□□□□ -2.29
LIM2P55344 Y_RNA.419-201ENST00000384041 102 ntBASIC0.72□□□□□ -2.29
LIM2P55344 Y_RNA.569-201ENST00000384749 103 ntBASIC0.72□□□□□ -2.29
LIM2P55344 MIR942-201ENST00000401111 86 ntBASIC0.72□□□□□ -2.29
LIM2P55344 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.72□□□□□ -2.29
LIM2P55344 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
LIM2P55344 AL392103.1-201ENST00000447000 198 ntBASIC0.72□□□□□ -2.29
LIM2P55344 RPL39P28-201ENST00000465655 155 ntBASIC0.72□□□□□ -2.29
LIM2P55344 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.72□□□□□ -2.29
LIM2P55344 RNA5SP255-201ENST00000516370 107 ntBASIC0.72□□□□□ -2.29
LIM2P55344 RAC1P9-201ENST00000604990 392 ntBASIC0.72□□□□□ -2.29
LIM2P55344 AC134503.1-201ENST00000633048 54 ntBASIC0.72□□□□□ -2.29
LIM2P55344 MIR4251-201ENST00000635819 61 ntBASIC0.72□□□□□ -2.29
LIM2P55344 AC134026.1-201ENST00000623249 2239 ntBASIC0.72□□□□□ -2.29
LIM2P55344 Y_RNA.31-201ENST00000362574 102 ntBASIC0.71□□□□□ -2.3
LIM2P55344 Y_RNA.537-201ENST00000384626 109 ntBASIC0.71□□□□□ -2.3
LIM2P55344 SNORA26.5-201ENST00000391215 123 ntBASIC0.71□□□□□ -2.3
LIM2P55344 RNA5SP496-201ENST00000391240 109 ntBASIC0.71□□□□□ -2.3
LIM2P55344 AC023449.1-201ENST00000454464 154 ntBASIC0.71□□□□□ -2.3
LIM2P55344 RNU6-1143P-201ENST00000516125 104 ntBASIC0.71□□□□□ -2.3
LIM2P55344 RPL23AP91-201ENST00000569211 455 ntBASIC0.71□□□□□ -2.3
LIM2P55344 MIR5688-201ENST00000580619 83 ntBASIC0.71□□□□□ -2.3
LIM2P55344 AL355297.3-201ENST00000604082 446 ntBASIC0.71□□□□□ -2.3
LIM2P55344 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
LIM2P55344 RNU6-290P-201ENST00000365212 101 ntBASIC0.7□□□□□ -2.3
LIM2P55344 RNU6-326P-201ENST00000365480 107 ntBASIC0.7□□□□□ -2.3
LIM2P55344 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
LIM2P55344 SNORD111-201ENST00000408139 94 ntBASIC0.7□□□□□ -2.3
LIM2P55344 RNU2-14P-201ENST00000411053 191 ntBASIC0.7□□□□□ -2.3
LIM2P55344 U7.7-201ENST00000459276 60 ntBASIC0.7□□□□□ -2.3
LIM2P55344 RPS29P1-201ENST00000465274 159 ntBASIC0.7□□□□□ -2.3
LIM2P55344 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.7□□□□□ -2.3
LIM2P55344 RNA5SP220-201ENST00000516298 104 ntBASIC0.7□□□□□ -2.3
LIM2P55344 RNU6-764P-201ENST00000516396 105 ntBASIC0.7□□□□□ -2.3
LIM2P55344 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.7□□□□□ -2.3
LIM2P55344 AC131055.1-201ENST00000584626 316 ntBASIC0.7□□□□□ -2.3
LIM2P55344 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
LIM2P55344 AL078603.1-201ENST00000603824 313 ntBASIC0.7□□□□□ -2.3
LIM2P55344 AC037487.3-201ENST00000606668 112 ntBASIC0.7□□□□□ -2.3
LIM2P55344 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
LIM2P55344 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
LIM2P55344 RNU6-1205P-201ENST00000363625 106 ntBASIC0.69□□□□□ -2.3
LIM2P55344 Y_RNA.158-201ENST00000363651 101 ntBASIC0.69□□□□□ -2.3
LIM2P55344 Y_RNA.389-201ENST00000383924 113 ntBASIC0.69□□□□□ -2.3
LIM2P55344 RNU6-474P-201ENST00000384243 107 ntBASIC0.69□□□□□ -2.3
LIM2P55344 Y_RNA.535-201ENST00000384612 99 ntBASIC0.69□□□□□ -2.3
LIM2P55344 MIR608-201ENST00000384820 100 ntBASIC0.69□□□□□ -2.3
LIM2P55344 RNU6-308P-201ENST00000390957 107 ntBASIC0.69□□□□□ -2.3
LIM2P55344 SNORA53-201ENST00000391141 249 ntBASIC0.69□□□□□ -2.3
LIM2P55344 U8.17-201ENST00000391292 132 ntBASIC0.69□□□□□ -2.3
LIM2P55344 RNU6-613P-201ENST00000410412 108 ntBASIC0.69□□□□□ -2.3
LIM2P55344 RPS3AP1-201ENST00000413190 320 ntBASIC0.69□□□□□ -2.3
LIM2P55344 MTCO1P5-201ENST00000433573 344 ntBASIC0.69□□□□□ -2.3
LIM2P55344 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms