Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR9-3-201ENST00000385084 90 ntBASIC1.94□□□□□ -2.1
COPB1P53618 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
COPB1P53618 U8.13-201ENST00000390842 128 ntBASIC1.94□□□□□ -2.1
COPB1P53618 RNU6-239P-201ENST00000390990 99 ntBASIC1.94□□□□□ -2.1
COPB1P53618 RNA5SP100-201ENST00000410903 110 ntBASIC1.94□□□□□ -2.1
COPB1P53618 RNA5SP59-201ENST00000410922 110 ntBASIC1.94□□□□□ -2.1
COPB1P53618 Y_RNA.622-201ENST00000411091 108 ntBASIC1.94□□□□□ -2.1
COPB1P53618 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.94□□□□□ -2.1
COPB1P53618 AL445685.2-201ENST00000422551 342 ntBASIC1.94□□□□□ -2.1
COPB1P53618 FTH1P12-201ENST00000432137 551 ntBASIC1.94□□□□□ -2.1
COPB1P53618 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.94□□□□□ -2.1
COPB1P53618 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.94□□□□□ -2.1
COPB1P53618 MRPS17P9-201ENST00000511924 393 ntBASIC1.94□□□□□ -2.1
COPB1P53618 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.94□□□□□ -2.1
COPB1P53618 AC108729.3-201ENST00000513484 108 ntBASIC1.94□□□□□ -2.1
COPB1P53618 RNU2-56P-201ENST00000516826 190 ntBASIC1.94□□□□□ -2.1
COPB1P53618 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.94□□□□□ -2.1
COPB1P53618 RNA5SP437-201ENST00000517249 129 ntBASIC1.94□□□□□ -2.1
COPB1P53618 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.94□□□□□ -2.1
COPB1P53618 JPX_2.1-201ENST00000614161 69 ntBASIC1.94□□□□□ -2.1
COPB1P53618 U1.36-201ENST00000620684 176 ntBASIC1.94□□□□□ -2.1
COPB1P53618 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.94□□□□□ -2.1
COPB1P53618 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
COPB1P53618 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
COPB1P53618 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COPB1P53618 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
COPB1P53618 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COPB1P53618 U8.5-201ENST00000364528 136 ntBASIC1.93□□□□□ -2.1
COPB1P53618 SNORA4.2-201ENST00000365313 147 ntBASIC1.93□□□□□ -2.1
COPB1P53618 RNU6-1130P-201ENST00000365434 107 ntBASIC1.93□□□□□ -2.1
COPB1P53618 RNU6-746P-201ENST00000384112 109 ntBASIC1.93□□□□□ -2.1
COPB1P53618 HSPE1P9-201ENST00000440046 311 ntBASIC1.93□□□□□ -2.1
COPB1P53618 OR9P1P-201ENST00000496431 281 ntBASIC1.93□□□□□ -2.1
COPB1P53618 RPL23AP63-201ENST00000498752 471 ntBASIC1.93□□□□□ -2.1
COPB1P53618 RNU7-200P-201ENST00000516105 62 ntBASIC1.93□□□□□ -2.1
COPB1P53618 RNU7-28P-201ENST00000516759 62 ntBASIC1.93□□□□□ -2.1
COPB1P53618 AL160236.1-201ENST00000556317 195 ntBASIC1.93□□□□□ -2.1
COPB1P53618 MIR3618-201ENST00000580330 88 ntBASIC1.93□□□□□ -2.1
COPB1P53618 AC012493.3-201ENST00000604494 112 ntBASIC1.93□□□□□ -2.1
COPB1P53618 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.93□□□□□ -2.1
COPB1P53618 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
COPB1P53618 Y_RNA.357-201ENST00000365487 109 ntBASIC1.92□□□□□ -2.1
COPB1P53618 RNU6-643P-201ENST00000384018 107 ntBASIC1.92□□□□□ -2.1
COPB1P53618 RNU6-125P-201ENST00000384505 107 ntBASIC1.92□□□□□ -2.1
COPB1P53618 MIR520A-201ENST00000384862 85 ntBASIC1.92□□□□□ -2.1
COPB1P53618 RNA5SP482-201ENST00000391269 118 ntBASIC1.92□□□□□ -2.1
COPB1P53618 RNA5SP182-201ENST00000516064 82 ntBASIC1.92□□□□□ -2.1
COPB1P53618 RNU7-149P-201ENST00000516739 59 ntBASIC1.92□□□□□ -2.1
COPB1P53618 AC008507.4-201ENST00000585464 127 ntBASIC1.92□□□□□ -2.1
COPB1P53618 AP000942.3-201ENST00000603702 160 ntBASIC1.92□□□□□ -2.1
COPB1P53618 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
COPB1P53618 RNY1P5-201ENST00000383890 115 ntBASIC1.91□□□□□ -2.1
COPB1P53618 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
COPB1P53618 AC023449.1-201ENST00000454464 154 ntBASIC1.91□□□□□ -2.1
COPB1P53618 RNU6-1299P-201ENST00000516316 100 ntBASIC1.91□□□□□ -2.1
COPB1P53618 RNA5SP153-201ENST00000516498 76 ntBASIC1.91□□□□□ -2.1
COPB1P53618 RNU6-197P-201ENST00000516680 100 ntBASIC1.91□□□□□ -2.1
COPB1P53618 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.91□□□□□ -2.1
COPB1P53618 AC097639.2-201ENST00000603159 172 ntBASIC1.91□□□□□ -2.1
COPB1P53618 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
COPB1P53618 MIRLET7C-201ENST00000362160 84 ntBASIC1.9□□□□□ -2.11
COPB1P53618 Y_RNA.8-201ENST00000362353 102 ntBASIC1.9□□□□□ -2.11
COPB1P53618 RNU6-774P-201ENST00000363238 107 ntBASIC1.9□□□□□ -2.11
COPB1P53618 Y_RNA.432-201ENST00000384087 111 ntBASIC1.9□□□□□ -2.11
COPB1P53618 Y_RNA.486-201ENST00000384398 107 ntBASIC1.9□□□□□ -2.11
COPB1P53618 SNORD72-201ENST00000390994 80 ntBASIC1.9□□□□□ -2.11
COPB1P53618 MIR548M-201ENST00000408260 86 ntBASIC1.9□□□□□ -2.11
COPB1P53618 AC006461.1-201ENST00000412637 326 ntBASIC1.9□□□□□ -2.11
COPB1P53618 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.9□□□□□ -2.11
COPB1P53618 STAG3L5P-204ENST00000443759 179 ntBASIC1.9□□□□□ -2.11
COPB1P53618 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.9□□□□□ -2.11
COPB1P53618 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.9□□□□□ -2.11
COPB1P53618 AC107027.2-201ENST00000512197 115 ntBASIC1.9□□□□□ -2.11
COPB1P53618 AC087685.1-201ENST00000587507 141 ntBASIC1.9□□□□□ -2.11
COPB1P53618 MIR6845-201ENST00000613182 61 ntBASIC1.9□□□□□ -2.11
COPB1P53618 Pinc.1-201ENST00000616452 154 ntBASIC1.9□□□□□ -2.11
COPB1P53618 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.9□□□□□ -2.11
COPB1P53618 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
COPB1P53618 SNORD68-201ENST00000363214 84 ntBASIC1.89□□□□□ -2.11
COPB1P53618 Y_RNA.265-201ENST00000364677 108 ntBASIC1.89□□□□□ -2.11
COPB1P53618 Y_RNA.634-201ENST00000364811 113 ntBASIC1.89□□□□□ -2.11
COPB1P53618 RNU6-818P-201ENST00000364837 108 ntBASIC1.89□□□□□ -2.11
COPB1P53618 SNORD50B-201ENST00000364995 70 ntBASIC1.89□□□□□ -2.11
COPB1P53618 RNU6-449P-201ENST00000383914 107 ntBASIC1.89□□□□□ -2.11
COPB1P53618 RNU6-131P-201ENST00000391144 107 ntBASIC1.89□□□□□ -2.11
COPB1P53618 RN7SKP200-201ENST00000410564 320 ntBASIC1.89□□□□□ -2.11
COPB1P53618 MLLT10P1-201ENST00000418346 262 ntBASIC1.89□□□□□ -2.11
COPB1P53618 MIR4662B-201ENST00000579498 81 ntBASIC1.89□□□□□ -2.11
COPB1P53618 MIR3133-201ENST00000583157 78 ntBASIC1.89□□□□□ -2.11
COPB1P53618 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.89□□□□□ -2.11
COPB1P53618 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.89□□□□□ -2.11
COPB1P53618 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
COPB1P53618 RNA5SP276-201ENST00000362580 94 ntBASIC1.88□□□□□ -2.11
COPB1P53618 Y_RNA.91-201ENST00000363042 107 ntBASIC1.88□□□□□ -2.11
COPB1P53618 SNORD116-18-201ENST00000383961 92 ntBASIC1.88□□□□□ -2.11
COPB1P53618 RNU6-950P-201ENST00000384651 107 ntBASIC1.88□□□□□ -2.11
COPB1P53618 RNU6-1031P-201ENST00000384773 107 ntBASIC1.88□□□□□ -2.11
COPB1P53618 RNA5SP247-201ENST00000411181 105 ntBASIC1.88□□□□□ -2.11
COPB1P53618 Y_RNA.703-201ENST00000516846 111 ntBASIC1.88□□□□□ -2.11
COPB1P53618 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms