Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-970P-201ENST00000516312 107 ntBASIC2.93□□□□□ -1.94
USP11P51784 IGKV3-31-201ENST00000523109 329 ntBASIC2.93□□□□□ -1.94
USP11P51784 AP002004.2-201ENST00000531656 154 ntBASIC2.93□□□□□ -1.94
USP11P51784 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
USP11P51784 MIR3124-201ENST00000582636 67 ntBASIC2.93□□□□□ -1.94
USP11P51784 MIR4762-201ENST00000585261 75 ntBASIC2.93□□□□□ -1.94
USP11P51784 AC021443.1-201ENST00000604478 211 ntBASIC2.93□□□□□ -1.94
USP11P51784 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
USP11P51784 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
USP11P51784 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
USP11P51784 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
USP11P51784 RNA5SP68-201ENST00000363885 119 ntBASIC2.92□□□□□ -1.94
USP11P51784 Y_RNA.213-201ENST00000364178 111 ntBASIC2.92□□□□□ -1.94
USP11P51784 Y_RNA.242-201ENST00000364473 110 ntBASIC2.92□□□□□ -1.94
USP11P51784 MIR627-201ENST00000384979 97 ntBASIC2.92□□□□□ -1.94
USP11P51784 MIR27B-201ENST00000385129 97 ntBASIC2.92□□□□□ -1.94
USP11P51784 RNU11-5P-201ENST00000391216 129 ntBASIC2.92□□□□□ -1.94
USP11P51784 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.92□□□□□ -1.94
USP11P51784 AL163195.1-201ENST00000496941 348 ntBASIC2.92□□□□□ -1.94
USP11P51784 Y_RNA.714-201ENST00000517065 90 ntBASIC2.92□□□□□ -1.94
USP11P51784 AC022523.2-201ENST00000561045 150 ntBASIC2.92□□□□□ -1.94
USP11P51784 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.92□□□□□ -1.94
USP11P51784 SNORD68-201ENST00000363214 84 ntBASIC2.91□□□□□ -1.94
USP11P51784 SNORD115-28-201ENST00000363931 81 ntBASIC2.91□□□□□ -1.94
USP11P51784 RNU1-138P-201ENST00000384093 164 ntBASIC2.91□□□□□ -1.94
USP11P51784 Y_RNA.440-201ENST00000384120 114 ntBASIC2.91□□□□□ -1.94
USP11P51784 SNORA8-201ENST00000384574 139 ntBASIC2.91□□□□□ -1.94
USP11P51784 RNU2-63P-201ENST00000410792 194 ntBASIC2.91□□□□□ -1.94
USP11P51784 MTATP8P2-201ENST00000435212 202 ntBASIC2.91□□□□□ -1.94
USP11P51784 AC009238.1-201ENST00000442165 424 ntBASIC2.91□□□□□ -1.94
USP11P51784 AC009237.6-201ENST00000446969 424 ntBASIC2.91□□□□□ -1.94
USP11P51784 RNU6-904P-201ENST00000516206 101 ntBASIC2.91□□□□□ -1.94
USP11P51784 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.91□□□□□ -1.94
USP11P51784 MIR5092-201ENST00000583139 88 ntBASIC2.91□□□□□ -1.94
USP11P51784 AL355297.2-201ENST00000604792 129 ntBASIC2.91□□□□□ -1.94
USP11P51784 AL442128.1-201ENST00000615151 90 ntBASIC2.91□□□□□ -1.94
USP11P51784 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.91□□□□□ -1.94
USP11P51784 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.9□□□□□ -1.94
USP11P51784 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.94
USP11P51784 U8.5-201ENST00000364528 136 ntBASIC2.9□□□□□ -1.95
USP11P51784 RNU7-123P-201ENST00000515911 60 ntBASIC2.9□□□□□ -1.95
USP11P51784 AC084364.2-201ENST00000546924 395 ntBASIC2.9□□□□□ -1.95
USP11P51784 HSPE1P19-201ENST00000603327 295 ntBASIC2.9□□□□□ -1.95
USP11P51784 AL049779.4-201ENST00000604500 156 ntBASIC2.9□□□□□ -1.95
USP11P51784 MIR6817-201ENST00000615588 66 ntBASIC2.9□□□□□ -1.95
USP11P51784 Y_RNA.818-201ENST00000618813 71 ntBASIC2.9□□□□□ -1.95
USP11P51784 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
USP11P51784 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP11P51784 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
USP11P51784 RNU4-82P-201ENST00000362443 140 ntBASIC2.89□□□□□ -1.95
USP11P51784 Y_RNA.78-201ENST00000362970 110 ntBASIC2.89□□□□□ -1.95
USP11P51784 RNA5SP173-201ENST00000364857 136 ntBASIC2.89□□□□□ -1.95
USP11P51784 RNU6-442P-201ENST00000383968 104 ntBASIC2.89□□□□□ -1.95
USP11P51784 RNY1P6-201ENST00000384193 109 ntBASIC2.89□□□□□ -1.95
USP11P51784 MIR548D2-201ENST00000384955 97 ntBASIC2.89□□□□□ -1.95
USP11P51784 MIR561-201ENST00000385216 97 ntBASIC2.89□□□□□ -1.95
USP11P51784 RNA5SP210-201ENST00000391034 120 ntBASIC2.89□□□□□ -1.95
USP11P51784 AL445646.1-201ENST00000431784 216 ntBASIC2.89□□□□□ -1.95
USP11P51784 AC099677.2-201ENST00000436385 175 ntBASIC2.89□□□□□ -1.95
USP11P51784 AL445687.1-201ENST00000439946 251 ntBASIC2.89□□□□□ -1.95
USP11P51784 RNU7-164P-201ENST00000459221 62 ntBASIC2.89□□□□□ -1.95
USP11P51784 TRBV12-1-201ENST00000479785 344 ntBASIC2.89□□□□□ -1.95
USP11P51784 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.89□□□□□ -1.95
USP11P51784 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.89□□□□□ -1.95
USP11P51784 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.89□□□□□ -1.95
USP11P51784 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
USP11P51784 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.89□□□□□ -1.95
USP11P51784 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USP11P51784 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.88□□□□□ -1.95
USP11P51784 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP11P51784 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.88□□□□□ -1.95
USP11P51784 RNA5SP393-201ENST00000363423 117 ntBASIC2.88□□□□□ -1.95
USP11P51784 SNORD14E-201ENST00000364009 85 ntBASIC2.88□□□□□ -1.95
USP11P51784 MIR802-201ENST00000390235 94 ntBASIC2.88□□□□□ -1.95
USP11P51784 RNA5SP323-201ENST00000391094 133 ntBASIC2.88□□□□□ -1.95
USP11P51784 U8.17-201ENST00000391292 132 ntBASIC2.88□□□□□ -1.95
USP11P51784 RNU2-35P-201ENST00000516446 142 ntBASIC2.88□□□□□ -1.95
USP11P51784 RNU6-158P-201ENST00000517104 100 ntBASIC2.88□□□□□ -1.95
USP11P51784 AC141557.1-201ENST00000540982 400 ntBASIC2.88□□□□□ -1.95
USP11P51784 MIR3945-201ENST00000581853 98 ntBASIC2.88□□□□□ -1.95
USP11P51784 MIR3616-201ENST00000584070 92 ntBASIC2.88□□□□□ -1.95
USP11P51784 U4.3-201ENST00000621047 82 ntBASIC2.88□□□□□ -1.95
USP11P51784 AC010297.1-201ENST00000623948 149 ntBASIC2.88□□□□□ -1.95
USP11P51784 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP11P51784 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP11P51784 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
USP11P51784 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP11P51784 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP11P51784 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.87□□□□□ -1.95
USP11P51784 RNA5SP456-201ENST00000364002 114 ntBASIC2.87□□□□□ -1.95
USP11P51784 MIR1262-201ENST00000408276 93 ntBASIC2.87□□□□□ -1.95
USP11P51784 AC092427.1-202ENST00000430569 476 ntBASIC2.87□□□□□ -1.95
USP11P51784 AL606517.2-201ENST00000442855 241 ntBASIC2.87□□□□□ -1.95
USP11P51784 ATP5J2P3-201ENST00000451550 258 ntBASIC2.87□□□□□ -1.95
USP11P51784 RNU1-131P-201ENST00000458943 161 ntBASIC2.87□□□□□ -1.95
USP11P51784 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.87□□□□□ -1.95
USP11P51784 RNA5SP148-201ENST00000516527 94 ntBASIC2.87□□□□□ -1.95
USP11P51784 SNORD45.4-201ENST00000516629 73 ntBASIC2.87□□□□□ -1.95
USP11P51784 MIR4435-1-201ENST00000582552 80 ntBASIC2.87□□□□□ -1.95
USP11P51784 MIR4305-201ENST00000583252 102 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms