Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNU1-131P-201ENST00000458943 161 ntBASIC2.5□□□□□ -2.01
MRE11P49959 RNU6-1211P-201ENST00000459179 105 ntBASIC2.5□□□□□ -2.01
MRE11P49959 RNA5SP153-201ENST00000516498 76 ntBASIC2.5□□□□□ -2.01
MRE11P49959 AC091178.2-201ENST00000584401 117 ntBASIC2.5□□□□□ -2.01
MRE11P49959 AC009831.4-201ENST00000620744 325 ntBASIC2.5□□□□□ -2.01
MRE11P49959 AP001340.1-201ENST00000624405 217 ntBASIC2.5□□□□□ -2.01
MRE11P49959 U6.108-201ENST00000637764 58 ntBASIC2.5□□□□□ -2.01
MRE11P49959 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
MRE11P49959 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
MRE11P49959 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.49□□□□□ -2.01
MRE11P49959 Y_RNA.127-201ENST00000363386 109 ntBASIC2.49□□□□□ -2.01
MRE11P49959 Y_RNA.261-201ENST00000364631 102 ntBASIC2.49□□□□□ -2.01
MRE11P49959 RNU6-1336P-201ENST00000383886 109 ntBASIC2.49□□□□□ -2.01
MRE11P49959 SNORD23.1-201ENST00000408212 104 ntBASIC2.49□□□□□ -2.01
MRE11P49959 EDDM3CP-201ENST00000415977 425 ntBASIC2.49□□□□□ -2.01
MRE11P49959 AC245047.4-201ENST00000433189 144 ntBASIC2.49□□□□□ -2.01
MRE11P49959 AC009238.1-201ENST00000442165 424 ntBASIC2.49□□□□□ -2.01
MRE11P49959 AC009237.6-201ENST00000446969 424 ntBASIC2.49□□□□□ -2.01
MRE11P49959 AC097639.2-201ENST00000603159 172 ntBASIC2.49□□□□□ -2.01
MRE11P49959 AL359075.3-201ENST00000613288 217 ntBASIC2.49□□□□□ -2.01
MRE11P49959 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
MRE11P49959 Y_RNA.91-201ENST00000363042 107 ntBASIC2.48□□□□□ -2.01
MRE11P49959 RNA5SP205-201ENST00000364653 136 ntBASIC2.48□□□□□ -2.01
MRE11P49959 Y_RNA.634-201ENST00000364811 113 ntBASIC2.48□□□□□ -2.01
MRE11P49959 SNORD116-14-201ENST00000383894 92 ntBASIC2.48□□□□□ -2.01
MRE11P49959 SNORD116-17-201ENST00000383929 92 ntBASIC2.48□□□□□ -2.01
MRE11P49959 RNU6-42P-201ENST00000384165 107 ntBASIC2.48□□□□□ -2.01
MRE11P49959 SNORD116-15-201ENST00000384445 92 ntBASIC2.48□□□□□ -2.01
MRE11P49959 SNORD116-19-201ENST00000384729 92 ntBASIC2.48□□□□□ -2.01
MRE11P49959 AL117342.1-201ENST00000404861 406 ntBASIC2.48□□□□□ -2.01
MRE11P49959 SUMO2P12-201ENST00000405924 140 ntBASIC2.48□□□□□ -2.01
MRE11P49959 RNU2-70P-201ENST00000410718 179 ntBASIC2.48□□□□□ -2.01
MRE11P49959 RNU2-40P-201ENST00000410833 196 ntBASIC2.48□□□□□ -2.01
MRE11P49959 Y_RNA.621-201ENST00000411065 96 ntBASIC2.48□□□□□ -2.01
MRE11P49959 RNU6-1333P-201ENST00000516162 93 ntBASIC2.48□□□□□ -2.01
MRE11P49959 RNU6-1291P-201ENST00000516591 104 ntBASIC2.48□□□□□ -2.01
MRE11P49959 AP001328.1-201ENST00000528550 176 ntBASIC2.48□□□□□ -2.01
MRE11P49959 AC011603.4-201ENST00000611325 277 ntBASIC2.48□□□□□ -2.01
MRE11P49959 JPX_2.1-201ENST00000614161 69 ntBASIC2.48□□□□□ -2.01
MRE11P49959 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
MRE11P49959 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
MRE11P49959 SNORA33-201ENST00000363664 130 ntBASIC2.47□□□□□ -2.01
MRE11P49959 SNORA3A-201ENST00000364113 130 ntBASIC2.47□□□□□ -2.01
MRE11P49959 SNORD50B-201ENST00000364995 70 ntBASIC2.47□□□□□ -2.01
MRE11P49959 RNU6-1138P-201ENST00000365359 106 ntBASIC2.47□□□□□ -2.01
MRE11P49959 RNU6-160P-201ENST00000384591 107 ntBASIC2.47□□□□□ -2.01
MRE11P49959 RNU11-5P-201ENST00000391216 129 ntBASIC2.47□□□□□ -2.01
MRE11P49959 POLR2J4-204ENST00000418424 324 ntBASIC2.47□□□□□ -2.01
MRE11P49959 ATP5J2P3-201ENST00000451550 258 ntBASIC2.47□□□□□ -2.01
MRE11P49959 OR9P1P-201ENST00000496431 281 ntBASIC2.47□□□□□ -2.01
MRE11P49959 RNU7-149P-201ENST00000516739 59 ntBASIC2.47□□□□□ -2.01
MRE11P49959 RNU2-56P-201ENST00000516826 190 ntBASIC2.47□□□□□ -2.01
MRE11P49959 RNU6-1234P-201ENST00000516877 103 ntBASIC2.47□□□□□ -2.01
MRE11P49959 AC090142.3-201ENST00000519012 385 ntBASIC2.47□□□□□ -2.01
MRE11P49959 MIR3126-201ENST00000577443 74 ntBASIC2.47□□□□□ -2.01
MRE11P49959 Pinc.1-201ENST00000616452 154 ntBASIC2.47□□□□□ -2.01
MRE11P49959 MIR6079-201ENST00000635807 62 ntBASIC2.47□□□□□ -2.01
MRE11P49959 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
MRE11P49959 AC018630.2-201ENST00000534866 2403 ntBASIC2.46□□□□□ -2.02
MRE11P49959 SNORA25.7-201ENST00000364375 127 ntBASIC2.46□□□□□ -2.02
MRE11P49959 RNU6-80P-201ENST00000384195 107 ntBASIC2.46□□□□□ -2.02
MRE11P49959 SNORA17.3-201ENST00000391159 129 ntBASIC2.46□□□□□ -2.02
MRE11P49959 AC233266.1-201ENST00000454518 96 ntBASIC2.46□□□□□ -2.02
MRE11P49959 NDUFA4P2-201ENST00000489989 244 ntBASIC2.46□□□□□ -2.02
MRE11P49959 RN7SL274P-201ENST00000492268 272 ntBASIC2.46□□□□□ -2.02
MRE11P49959 RNU1-142P-201ENST00000516682 145 ntBASIC2.46□□□□□ -2.02
MRE11P49959 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.46□□□□□ -2.02
MRE11P49959 MIR4662B-201ENST00000579498 81 ntBASIC2.46□□□□□ -2.02
MRE11P49959 U7.2-201ENST00000607576 63 ntBASIC2.46□□□□□ -2.02
MRE11P49959 AC242852.1-201ENST00000612151 96 ntBASIC2.46□□□□□ -2.02
MRE11P49959 AC244015.1-201ENST00000622301 99 ntBASIC2.46□□□□□ -2.02
MRE11P49959 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.46□□□□□ -2.02
MRE11P49959 Y_RNA.253-201ENST00000364562 112 ntBASIC2.45□□□□□ -2.02
MRE11P49959 RNU6-915P-201ENST00000364943 103 ntBASIC2.45□□□□□ -2.02
MRE11P49959 SNORA48.3-201ENST00000391081 134 ntBASIC2.45□□□□□ -2.02
MRE11P49959 Y_RNA.584-201ENST00000391090 114 ntBASIC2.45□□□□□ -2.02
MRE11P49959 Y_RNA.629-201ENST00000411368 105 ntBASIC2.45□□□□□ -2.02
MRE11P49959 BTF3P4-201ENST00000418852 495 ntBASIC2.45□□□□□ -2.02
MRE11P49959 HMGN1P7-201ENST00000491722 313 ntBASIC2.45□□□□□ -2.02
MRE11P49959 RNU6-341P-201ENST00000516973 96 ntBASIC2.45□□□□□ -2.02
MRE11P49959 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.45□□□□□ -2.02
MRE11P49959 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
MRE11P49959 AC092881.1-201ENST00000638218 2733 ntBASIC2.45□□□□□ -2.02
MRE11P49959 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
MRE11P49959 Y_RNA.267-201ENST00000364679 109 ntBASIC2.44□□□□□ -2.02
MRE11P49959 Y_RNA.486-201ENST00000384398 107 ntBASIC2.44□□□□□ -2.02
MRE11P49959 RNU1-148P-201ENST00000384472 162 ntBASIC2.44□□□□□ -2.02
MRE11P49959 SNORA26-201ENST00000391286 122 ntBASIC2.44□□□□□ -2.02
MRE11P49959 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.44□□□□□ -2.02
MRE11P49959 RPS26P45-201ENST00000471748 340 ntBASIC2.44□□□□□ -2.02
MRE11P49959 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.44□□□□□ -2.02
MRE11P49959 RNU4-57P-201ENST00000515980 135 ntBASIC2.44□□□□□ -2.02
MRE11P49959 RNU6-126P-201ENST00000516685 103 ntBASIC2.44□□□□□ -2.02
MRE11P49959 MIR4529-201ENST00000578110 78 ntBASIC2.44□□□□□ -2.02
MRE11P49959 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.44□□□□□ -2.02
MRE11P49959 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
MRE11P49959 AC008555.8-201ENST00000623602 2168 ntBASIC2.43□□□□□ -2.02
MRE11P49959 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
MRE11P49959 RNA5SP493-201ENST00000364115 91 ntBASIC2.43□□□□□ -2.02
MRE11P49959 SNORA8-201ENST00000384574 139 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms