Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
THBS3P49746 AC018630.2-201ENST00000534866 2403 ntBASIC1.86□□□□□ -2.11
THBS3P49746 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
THBS3P49746 RNU6-1164P-201ENST00000364428 107 ntBASIC1.85□□□□□ -2.11
THBS3P49746 SNORD61-201ENST00000384252 73 ntBASIC1.85□□□□□ -2.11
THBS3P49746 Y_RNA.617-201ENST00000410920 90 ntBASIC1.85□□□□□ -2.11
THBS3P49746 AL356320.1-201ENST00000429616 163 ntBASIC1.85□□□□□ -2.11
THBS3P49746 AC018634.1-201ENST00000437554 401 ntBASIC1.85□□□□□ -2.11
THBS3P49746 Y_RNA.666-201ENST00000516187 112 ntBASIC1.85□□□□□ -2.11
THBS3P49746 RNU6-504P-201ENST00000516568 104 ntBASIC1.85□□□□□ -2.11
THBS3P49746 RNU1-142P-201ENST00000516682 145 ntBASIC1.85□□□□□ -2.11
THBS3P49746 RNU6-126P-201ENST00000516685 103 ntBASIC1.85□□□□□ -2.11
THBS3P49746 RNU6-341P-201ENST00000516973 96 ntBASIC1.85□□□□□ -2.11
THBS3P49746 CYCSP26-201ENST00000534107 320 ntBASIC1.85□□□□□ -2.11
THBS3P49746 AL670379.3-201ENST00000605040 251 ntBASIC1.85□□□□□ -2.11
THBS3P49746 AL022345.2-201ENST00000606307 135 ntBASIC1.85□□□□□ -2.11
THBS3P49746 AC046143.2-201ENST00000609789 160 ntBASIC1.85□□□□□ -2.11
THBS3P49746 AL353149.1-201ENST00000610667 244 ntBASIC1.85□□□□□ -2.11
THBS3P49746 MIR6715A-201ENST00000615929 79 ntBASIC1.85□□□□□ -2.11
THBS3P49746 AL591926.4-201ENST00000616895 298 ntBASIC1.85□□□□□ -2.11
THBS3P49746 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.85□□□□□ -2.11
THBS3P49746 AL359851.1-201ENST00000569460 4997 ntBASIC1.85□□□□□ -2.11
THBS3P49746 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
THBS3P49746 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
THBS3P49746 MIR126-201ENST00000362291 85 ntBASIC1.84□□□□□ -2.11
THBS3P49746 SNORA1B-201ENST00000362535 133 ntBASIC1.84□□□□□ -2.11
THBS3P49746 Y_RNA.99-201ENST00000363138 105 ntBASIC1.84□□□□□ -2.11
THBS3P49746 SNORA38-201ENST00000363946 132 ntBASIC1.84□□□□□ -2.11
THBS3P49746 RNU6-647P-201ENST00000364243 107 ntBASIC1.84□□□□□ -2.11
THBS3P49746 SNORA22-201ENST00000383907 134 ntBASIC1.84□□□□□ -2.11
THBS3P49746 MIR548A2-201ENST00000384956 97 ntBASIC1.84□□□□□ -2.11
THBS3P49746 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.84□□□□□ -2.11
THBS3P49746 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.84□□□□□ -2.11
THBS3P49746 SRIP3-201ENST00000413200 219 ntBASIC1.84□□□□□ -2.11
THBS3P49746 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.84□□□□□ -2.11
THBS3P49746 ATP5J2P3-201ENST00000451550 258 ntBASIC1.84□□□□□ -2.11
THBS3P49746 AC079804.2-201ENST00000490376 200 ntBASIC1.84□□□□□ -2.11
THBS3P49746 IGKV1-22-201ENST00000524313 326 ntBASIC1.84□□□□□ -2.11
THBS3P49746 MIR3616-201ENST00000584070 92 ntBASIC1.84□□□□□ -2.11
THBS3P49746 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.84□□□□□ -2.11
THBS3P49746 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
THBS3P49746 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
THBS3P49746 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
THBS3P49746 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
THBS3P49746 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.83□□□□□ -2.12
THBS3P49746 RNU6-888P-201ENST00000363010 101 ntBASIC1.83□□□□□ -2.12
THBS3P49746 SNORA8-201ENST00000384574 139 ntBASIC1.83□□□□□ -2.12
THBS3P49746 RNU6-160P-201ENST00000384591 107 ntBASIC1.83□□□□□ -2.12
THBS3P49746 RNA5SP323-201ENST00000391094 133 ntBASIC1.83□□□□□ -2.12
THBS3P49746 AF228730.3-201ENST00000436691 102 ntBASIC1.83□□□□□ -2.12
THBS3P49746 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.83□□□□□ -2.12
THBS3P49746 CYCTP-201ENST00000504253 315 ntBASIC1.83□□□□□ -2.12
THBS3P49746 RNA5SP236-201ENST00000516169 116 ntBASIC1.83□□□□□ -2.12
THBS3P49746 RNA5SP281-201ENST00000516504 135 ntBASIC1.83□□□□□ -2.12
THBS3P49746 AC022217.4-201ENST00000604389 163 ntBASIC1.83□□□□□ -2.12
THBS3P49746 MIR6132-201ENST00000622083 109 ntBASIC1.83□□□□□ -2.12
THBS3P49746 MIR203B-201ENST00000636080 86 ntBASIC1.83□□□□□ -2.12
THBS3P49746 RNU6-862P-201ENST00000362804 105 ntBASIC1.82□□□□□ -2.12
THBS3P49746 RNU6-755P-201ENST00000364400 103 ntBASIC1.82□□□□□ -2.12
THBS3P49746 RNU1-91P-201ENST00000364746 163 ntBASIC1.82□□□□□ -2.12
THBS3P49746 MIRLET7F2-201ENST00000385277 83 ntBASIC1.82□□□□□ -2.12
THBS3P49746 MIR548A3-201ENST00000385297 97 ntBASIC1.82□□□□□ -2.12
THBS3P49746 AC063976.4-201ENST00000421971 163 ntBASIC1.82□□□□□ -2.12
THBS3P49746 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.82□□□□□ -2.12
THBS3P49746 HMGN2P38-201ENST00000423806 265 ntBASIC1.82□□□□□ -2.12
THBS3P49746 RNU1-131P-201ENST00000458943 161 ntBASIC1.82□□□□□ -2.12
THBS3P49746 AC104435.1-201ENST00000483483 166 ntBASIC1.82□□□□□ -2.12
THBS3P49746 AL163195.1-201ENST00000496941 348 ntBASIC1.82□□□□□ -2.12
THBS3P49746 RN7SKP19-201ENST00000516016 252 ntBASIC1.82□□□□□ -2.12
THBS3P49746 RNU6-693P-201ENST00000516134 107 ntBASIC1.82□□□□□ -2.12
THBS3P49746 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.82□□□□□ -2.12
THBS3P49746 NDUFA5P6-201ENST00000542110 379 ntBASIC1.82□□□□□ -2.12
THBS3P49746 AC002984.1-201ENST00000591692 448 ntBASIC1.82□□□□□ -2.12
THBS3P49746 AC009831.4-201ENST00000620744 325 ntBASIC1.82□□□□□ -2.12
THBS3P49746 MIR376A2-201ENST00000636782 80 ntBASIC1.82□□□□□ -2.12
THBS3P49746 AC245060.5-201ENST00000610778 3293 ntBASIC1.81□□□□□ -2.12
THBS3P49746 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
THBS3P49746 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
THBS3P49746 Y_RNA.35-201ENST00000362601 101 ntBASIC1.81□□□□□ -2.12
THBS3P49746 SNORD24-201ENST00000383884 75 ntBASIC1.81□□□□□ -2.12
THBS3P49746 SNORA6-201ENST00000384033 151 ntBASIC1.81□□□□□ -2.12
THBS3P49746 SNORD116-21-201ENST00000384507 92 ntBASIC1.81□□□□□ -2.12
THBS3P49746 MIR518F-201ENST00000384973 87 ntBASIC1.81□□□□□ -2.12
THBS3P49746 MIR522-201ENST00000385071 87 ntBASIC1.81□□□□□ -2.12
THBS3P49746 SNORA48.3-201ENST00000391081 134 ntBASIC1.81□□□□□ -2.12
THBS3P49746 SNORD77.3-201ENST00000391113 65 ntBASIC1.81□□□□□ -2.12
THBS3P49746 RNU11-5P-201ENST00000391216 129 ntBASIC1.81□□□□□ -2.12
THBS3P49746 RN7SKP223-201ENST00000410582 62 ntBASIC1.81□□□□□ -2.12
THBS3P49746 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.81□□□□□ -2.12
THBS3P49746 AC099677.2-201ENST00000436385 175 ntBASIC1.81□□□□□ -2.12
THBS3P49746 AC009238.1-201ENST00000442165 424 ntBASIC1.81□□□□□ -2.12
THBS3P49746 AC009237.6-201ENST00000446969 424 ntBASIC1.81□□□□□ -2.12
THBS3P49746 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.81□□□□□ -2.12
THBS3P49746 AL049830.1-201ENST00000468034 425 ntBASIC1.81□□□□□ -2.12
THBS3P49746 AL358944.1-201ENST00000528537 144 ntBASIC1.81□□□□□ -2.12
THBS3P49746 MIR4648-201ENST00000580107 72 ntBASIC1.81□□□□□ -2.12
THBS3P49746 AC025166.1-201ENST00000612411 163 ntBASIC1.81□□□□□ -2.12
THBS3P49746 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.81□□□□□ -2.12
THBS3P49746 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
THBS3P49746 SNORD68-201ENST00000363214 84 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms