Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 SNORD115-36-201ENST00000365629 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 Y_RNA.377-201ENST00000365644 108 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 MIR592-201ENST00000384959 97 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.95□□□□□ -1.78
PRIM1P49642 RNU2-13P-201ENST00000515909 113 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 AC004812.1-201ENST00000540773 146 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 MIR3616-201ENST00000584070 92 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRIM1P49642 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.95□□□□□ -1.78
PRIM1P49642 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.94□□□□□ -1.78
PRIM1P49642 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.94□□□□□ -1.78
PRIM1P49642 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.94□□□□□ -1.78
PRIM1P49642 RNU6-228P-201ENST00000362700 106 ntBASIC3.94□□□□□ -1.78
PRIM1P49642 RNU6-1276P-201ENST00000365372 104 ntBASIC3.94□□□□□ -1.78
PRIM1P49642 SNORD77B-201ENST00000391112 67 ntBASIC3.94□□□□□ -1.78
PRIM1P49642 SNORA11.4-201ENST00000408823 129 ntBASIC3.94□□□□□ -1.78
PRIM1P49642 RNU6-1018P-201ENST00000516577 106 ntBASIC3.94□□□□□ -1.78
PRIM1P49642 U7.3-201ENST00000616123 62 ntBASIC3.94□□□□□ -1.78
PRIM1P49642 AC021613.1-201ENST00000623880 111 ntBASIC3.94□□□□□ -1.78
PRIM1P49642 AC027279.3-201ENST00000625055 122 ntBASIC3.94□□□□□ -1.78
PRIM1P49642 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.94□□□□□ -1.78
PRIM1P49642 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRIM1P49642 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRIM1P49642 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PRIM1P49642 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.93□□□□□ -1.78
PRIM1P49642 RNA5SP383-201ENST00000362934 120 ntBASIC3.93□□□□□ -1.78
PRIM1P49642 Y_RNA.241-201ENST00000364470 117 ntBASIC3.93□□□□□ -1.78
PRIM1P49642 SNORD116-22-201ENST00000384430 92 ntBASIC3.93□□□□□ -1.78
PRIM1P49642 MIR577-201ENST00000385196 96 ntBASIC3.93□□□□□ -1.78
PRIM1P49642 MIR591-201ENST00000385290 95 ntBASIC3.93□□□□□ -1.78
PRIM1P49642 SNX2P2-201ENST00000424553 323 ntBASIC3.93□□□□□ -1.78
PRIM1P49642 AC245047.3-201ENST00000429428 127 ntBASIC3.93□□□□□ -1.78
PRIM1P49642 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.93□□□□□ -1.78
PRIM1P49642 SCARNA20.6-201ENST00000517251 106 ntBASIC3.93□□□□□ -1.78
PRIM1P49642 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRIM1P49642 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRIM1P49642 MAPK10-322ENST00000641485 4530 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRIM1P49642 RNU4-16P-201ENST00000364737 141 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 RNU6-675P-201ENST00000384236 104 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 MIR1261-201ENST00000408659 82 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 RNA5SP261-201ENST00000410536 106 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 RNU4-69P-201ENST00000410677 143 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 RNU1-143P-201ENST00000516296 146 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 RNA5SP395-201ENST00000516567 118 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 Y_RNA.705-201ENST00000516862 110 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 AC022254.1-201ENST00000567857 235 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 MIR3152-201ENST00000579801 74 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 U1.23-201ENST00000610293 146 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 RNU1-68P-201ENST00000615382 146 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 U1.39-201ENST00000621562 146 ntBASIC3.92□□□□□ -1.78
PRIM1P49642 MIR342-201ENST00000362212 99 ntBASIC3.91□□□□□ -1.78
PRIM1P49642 SNORA70.7-201ENST00000384159 133 ntBASIC3.91□□□□□ -1.78
PRIM1P49642 RNU6-644P-201ENST00000391155 98 ntBASIC3.91□□□□□ -1.78
PRIM1P49642 RNU6-972P-201ENST00000391208 107 ntBASIC3.91□□□□□ -1.78
PRIM1P49642 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.91□□□□□ -1.78
PRIM1P49642 RPPH1-2P-201ENST00000516688 293 ntBASIC3.91□□□□□ -1.78
PRIM1P49642 MIR4439-201ENST00000583746 80 ntBASIC3.91□□□□□ -1.78
PRIM1P49642 AC096720.1-201ENST00000604441 183 ntBASIC3.91□□□□□ -1.78
PRIM1P49642 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.91□□□□□ -1.78
PRIM1P49642 AL449363.1-201ENST00000617815 186 ntBASIC3.91□□□□□ -1.78
PRIM1P49642 AC064859.1-201ENST00000624741 174 ntBASIC3.91□□□□□ -1.78
PRIM1P49642 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRIM1P49642 RNU6-60P-201ENST00000364792 103 ntBASIC3.9□□□□□ -1.79
PRIM1P49642 IGLV3-17-201ENST00000519099 244 ntBASIC3.9□□□□□ -1.79
PRIM1P49642 AC079600.2-201ENST00000550076 130 ntBASIC3.9□□□□□ -1.79
PRIM1P49642 ZNF861P-201ENST00000588126 639 ntBASIC3.9□□□□□ -1.79
PRIM1P49642 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.9□□□□□ -1.79
PRIM1P49642 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PRIM1P49642 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRIM1P49642 SNORA1.2-201ENST00000365189 134 ntBASIC3.89□□□□□ -1.79
PRIM1P49642 RNU6-163P-201ENST00000384396 106 ntBASIC3.89□□□□□ -1.79
PRIM1P49642 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PRIM1P49642 AC003685.2-201ENST00000422795 395 ntBASIC3.89□□□□□ -1.79
PRIM1P49642 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PRIM1P49642 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PRIM1P49642 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRIM1P49642 AC073325.2-201ENST00000339545 159 ntBASIC3.88□□□□□ -1.79
PRIM1P49642 SNORA25B-201ENST00000365507 128 ntBASIC3.88□□□□□ -1.79
PRIM1P49642 RNU1-101P-201ENST00000391171 127 ntBASIC3.88□□□□□ -1.79
PRIM1P49642 MIR1255A-201ENST00000408338 113 ntBASIC3.88□□□□□ -1.79
PRIM1P49642 RPL32P35-201ENST00000415214 394 ntBASIC3.88□□□□□ -1.79
PRIM1P49642 RNA5SP57-201ENST00000459463 123 ntBASIC3.88□□□□□ -1.79
PRIM1P49642 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.88□□□□□ -1.79
PRIM1P49642 AC012531.4-201ENST00000616509 177 ntBASIC3.88□□□□□ -1.79
PRIM1P49642 AC073476.4-201ENST00000628409 72 ntBASIC3.88□□□□□ -1.79
PRIM1P49642 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
PRIM1P49642 SNORD115-2-201ENST00000362842 82 ntBASIC3.87□□□□□ -1.79
PRIM1P49642 SNORD115-20-201ENST00000365099 82 ntBASIC3.87□□□□□ -1.79
PRIM1P49642 CD24P4-201ENST00000382840 243 ntBASIC3.87□□□□□ -1.79
PRIM1P49642 AL512326.2-201ENST00000426359 151 ntBASIC3.87□□□□□ -1.79
PRIM1P49642 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.87□□□□□ -1.79
PRIM1P49642 RNU7-113P-201ENST00000459273 62 ntBASIC3.87□□□□□ -1.79
PRIM1P49642 AC018868.1-201ENST00000491307 315 ntBASIC3.87□□□□□ -1.79
PRIM1P49642 RNU6-795P-201ENST00000516323 103 ntBASIC3.87□□□□□ -1.79
PRIM1P49642 AC245166.1-201ENST00000521012 253 ntBASIC3.87□□□□□ -1.79
PRIM1P49642 AC090821.2-201ENST00000523552 176 ntBASIC3.87□□□□□ -1.79
PRIM1P49642 MIR4435-1-201ENST00000582552 80 ntBASIC3.87□□□□□ -1.79
PRIM1P49642 AC002984.1-201ENST00000591692 448 ntBASIC3.87□□□□□ -1.79
PRIM1P49642 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms