Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 U8.5-201ENST00000364528 136 ntBASIC1.7□□□□□ -2.14
RFX2P48378 Y_RNA.343-201ENST00000365354 112 ntBASIC1.7□□□□□ -2.14
RFX2P48378 Y_RNA.497-201ENST00000384447 98 ntBASIC1.7□□□□□ -2.14
RFX2P48378 SNORA20-201ENST00000384662 132 ntBASIC1.7□□□□□ -2.14
RFX2P48378 MIR513C-201ENST00000401352 84 ntBASIC1.7□□□□□ -2.14
RFX2P48378 RN7SKP200-201ENST00000410564 320 ntBASIC1.7□□□□□ -2.14
RFX2P48378 RNA5SP100-201ENST00000410903 110 ntBASIC1.7□□□□□ -2.14
RFX2P48378 RNA5SP59-201ENST00000410922 110 ntBASIC1.7□□□□□ -2.14
RFX2P48378 CALM2P4-201ENST00000430810 426 ntBASIC1.7□□□□□ -2.14
RFX2P48378 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.7□□□□□ -2.14
RFX2P48378 RNU7-34P-201ENST00000459394 64 ntBASIC1.7□□□□□ -2.14
RFX2P48378 Y_RNA.666-201ENST00000516187 112 ntBASIC1.7□□□□□ -2.14
RFX2P48378 SNORD45.4-201ENST00000516629 73 ntBASIC1.7□□□□□ -2.14
RFX2P48378 RNU7-28P-201ENST00000516759 62 ntBASIC1.7□□□□□ -2.14
RFX2P48378 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.7□□□□□ -2.14
RFX2P48378 RNU6-365P-201ENST00000517113 106 ntBASIC1.7□□□□□ -2.14
RFX2P48378 RNU6-1270P-201ENST00000517128 108 ntBASIC1.7□□□□□ -2.14
RFX2P48378 MIR5089-201ENST00000580047 84 ntBASIC1.7□□□□□ -2.14
RFX2P48378 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.7□□□□□ -2.14
RFX2P48378 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.7□□□□□ -2.14
RFX2P48378 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
RFX2P48378 AL157777.2-201ENST00000258070 137 ntBASIC1.69□□□□□ -2.14
RFX2P48378 Y_RNA.66-201ENST00000362862 102 ntBASIC1.69□□□□□ -2.14
RFX2P48378 snoU2-30.1-201ENST00000365012 70 ntBASIC1.69□□□□□ -2.14
RFX2P48378 SNORA26-201ENST00000391286 122 ntBASIC1.69□□□□□ -2.14
RFX2P48378 TMSB4XP3-201ENST00000445144 114 ntBASIC1.69□□□□□ -2.14
RFX2P48378 RNA5SP57-201ENST00000459463 123 ntBASIC1.69□□□□□ -2.14
RFX2P48378 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.69□□□□□ -2.14
RFX2P48378 AC114811.1-201ENST00000507207 168 ntBASIC1.69□□□□□ -2.14
RFX2P48378 RNU6-406P-201ENST00000516470 107 ntBASIC1.69□□□□□ -2.14
RFX2P48378 RNU6-789P-201ENST00000517105 102 ntBASIC1.69□□□□□ -2.14
RFX2P48378 AC087685.1-201ENST00000587507 141 ntBASIC1.69□□□□□ -2.14
RFX2P48378 AL096840.1-201ENST00000603287 93 ntBASIC1.69□□□□□ -2.14
RFX2P48378 SNORA28-201ENST00000606769 126 ntBASIC1.69□□□□□ -2.14
RFX2P48378 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RFX2P48378 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.68□□□□□ -2.14
RFX2P48378 MIRLET7C-201ENST00000362160 84 ntBASIC1.68□□□□□ -2.14
RFX2P48378 SNORD14E-201ENST00000364009 85 ntBASIC1.68□□□□□ -2.14
RFX2P48378 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.14
RFX2P48378 RNU6-597P-201ENST00000365620 102 ntBASIC1.68□□□□□ -2.14
RFX2P48378 SNORD61-201ENST00000384252 73 ntBASIC1.68□□□□□ -2.14
RFX2P48378 RNU6-163P-201ENST00000384396 106 ntBASIC1.68□□□□□ -2.14
RFX2P48378 SNORA19-201ENST00000384737 128 ntBASIC1.68□□□□□ -2.14
RFX2P48378 Y_RNA.568-201ENST00000384742 113 ntBASIC1.68□□□□□ -2.14
RFX2P48378 RNU6-1031P-201ENST00000384773 107 ntBASIC1.68□□□□□ -2.14
RFX2P48378 U8.16-201ENST00000391279 133 ntBASIC1.68□□□□□ -2.14
RFX2P48378 SNORA75.5-201ENST00000391291 81 ntBASIC1.68□□□□□ -2.14
RFX2P48378 AL034345.1-201ENST00000407768 123 ntBASIC1.68□□□□□ -2.14
RFX2P48378 RNU6-126P-201ENST00000516685 103 ntBASIC1.68□□□□□ -2.14
RFX2P48378 SNORA31.17-201ENST00000516953 127 ntBASIC1.68□□□□□ -2.14
RFX2P48378 AC007751.1-201ENST00000529260 376 ntBASIC1.68□□□□□ -2.14
RFX2P48378 MIR3646-201ENST00000578301 84 ntBASIC1.68□□□□□ -2.14
RFX2P48378 AP001485.1-201ENST00000604799 199 ntBASIC1.68□□□□□ -2.14
RFX2P48378 SNORA25.7-201ENST00000364375 127 ntBASIC1.67□□□□□ -2.14
RFX2P48378 SNORD50.2-201ENST00000365465 70 ntBASIC1.67□□□□□ -2.14
RFX2P48378 RNU6-442P-201ENST00000383968 104 ntBASIC1.67□□□□□ -2.14
RFX2P48378 RNU6-950P-201ENST00000384651 107 ntBASIC1.67□□□□□ -2.14
RFX2P48378 RNU6-460P-201ENST00000391158 108 ntBASIC1.67□□□□□ -2.14
RFX2P48378 RPL30P13-201ENST00000418873 348 ntBASIC1.67□□□□□ -2.14
RFX2P48378 snoU13.27-201ENST00000459278 104 ntBASIC1.67□□□□□ -2.14
RFX2P48378 AC092991.1-201ENST00000477176 376 ntBASIC1.67□□□□□ -2.14
RFX2P48378 RNU6-693P-201ENST00000516134 107 ntBASIC1.67□□□□□ -2.14
RFX2P48378 RNU6-504P-201ENST00000516568 104 ntBASIC1.67□□□□□ -2.14
RFX2P48378 RNA5SP168-201ENST00000516642 112 ntBASIC1.67□□□□□ -2.14
RFX2P48378 MIR4709-201ENST00000577272 72 ntBASIC1.67□□□□□ -2.14
RFX2P48378 AC091895.1-201ENST00000624494 256 ntBASIC1.67□□□□□ -2.14
RFX2P48378 U2.22-201ENST00000636441 106 ntBASIC1.67□□□□□ -2.14
RFX2P48378 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
RFX2P48378 Y_RNA.420-201ENST00000384043 110 ntBASIC1.66□□□□□ -2.14
RFX2P48378 SNORA1-201ENST00000384107 130 ntBASIC1.66□□□□□ -2.14
RFX2P48378 RNU6-424P-201ENST00000384367 105 ntBASIC1.66□□□□□ -2.14
RFX2P48378 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
RFX2P48378 MIR676-201ENST00000390702 67 ntBASIC1.66□□□□□ -2.14
RFX2P48378 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.66□□□□□ -2.14
RFX2P48378 RNU7-197P-201ENST00000458836 62 ntBASIC1.66□□□□□ -2.14
RFX2P48378 AC090142.3-201ENST00000519012 385 ntBASIC1.66□□□□□ -2.14
RFX2P48378 IGKV3-31-201ENST00000523109 329 ntBASIC1.66□□□□□ -2.14
RFX2P48378 AC024614.2-201ENST00000577584 372 ntBASIC1.66□□□□□ -2.14
RFX2P48378 MIR3129-201ENST00000581095 76 ntBASIC1.66□□□□□ -2.14
RFX2P48378 SNRPGP19-201ENST00000603826 189 ntBASIC1.66□□□□□ -2.14
RFX2P48378 AC021506.2-201ENST00000612354 169 ntBASIC1.66□□□□□ -2.14
RFX2P48378 Y_RNA.783-201ENST00000613546 102 ntBASIC1.66□□□□□ -2.14
RFX2P48378 AC132825.6-201ENST00000638861 357 ntBASIC1.66□□□□□ -2.14
RFX2P48378 AC010332.2-201ENST00000613083 1904 ntBASIC1.66□□□□□ -2.14
RFX2P48378 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.65□□□□□ -2.14
RFX2P48378 RNU6-268P-201ENST00000364174 107 ntBASIC1.65□□□□□ -2.15
RFX2P48378 MIR548A2-201ENST00000384956 97 ntBASIC1.65□□□□□ -2.15
RFX2P48378 MIR548O-201ENST00000408583 114 ntBASIC1.65□□□□□ -2.15
RFX2P48378 RNU6-257P-201ENST00000410238 98 ntBASIC1.65□□□□□ -2.15
RFX2P48378 SNRPGP14-201ENST00000435400 219 ntBASIC1.65□□□□□ -2.15
RFX2P48378 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.65□□□□□ -2.15
RFX2P48378 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.65□□□□□ -2.15
RFX2P48378 SNRPGP13-201ENST00000442212 177 ntBASIC1.65□□□□□ -2.15
RFX2P48378 CYCTP-201ENST00000504253 315 ntBASIC1.65□□□□□ -2.15
RFX2P48378 RNU7-25P-201ENST00000516544 62 ntBASIC1.65□□□□□ -2.15
RFX2P48378 RNA5SP481-201ENST00000516814 122 ntBASIC1.65□□□□□ -2.15
RFX2P48378 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.65□□□□□ -2.15
RFX2P48378 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.65□□□□□ -2.15
RFX2P48378 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.65□□□□□ -2.15
RFX2P48378 MIR6873-201ENST00000622788 63 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms