Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 Y_RNA.785-201ENST00000384290 109 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 Y_RNA.477-201ENST00000384352 108 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 MIR891A-201ENST00000401237 79 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 CALM2P4-201ENST00000430810 426 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 AC023449.1-201ENST00000454464 154 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 UBL5P3-201ENST00000475112 231 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 SNORD77.4-201ENST00000516158 81 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 RNU6-250P-201ENST00000516958 103 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 RPL23AP91-201ENST00000569211 455 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NKX2-1P43699 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NKX2-1P43699 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NKX2-1P43699 Y_RNA.65-201ENST00000362846 100 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 Y_RNA.229-201ENST00000364347 113 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 SNORA2.2-201ENST00000365473 135 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 MIR1298-201ENST00000408783 112 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 RNU4-43P-201ENST00000410628 137 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 RNU6-383P-201ENST00000410864 94 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 Y_RNA.621-201ENST00000411065 96 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 RPL30P7-201ENST00000479312 323 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 SNORD45.4-201ENST00000516629 73 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 SUMO2P16-201ENST00000519475 264 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 MIR3937-201ENST00000580135 106 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 MIR3671-201ENST00000580455 88 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 AC097639.2-201ENST00000603159 172 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 AL513534.2-201ENST00000603836 250 ntBASIC1.32□□□□□ -2.2
NKX2-1P43699 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NKX2-1P43699 Y_RNA.24-201ENST00000362508 103 ntBASIC1.31□□□□□ -2.2
NKX2-1P43699 RNU6-199P-201ENST00000362954 107 ntBASIC1.31□□□□□ -2.2
NKX2-1P43699 SNORD68-201ENST00000363214 84 ntBASIC1.31□□□□□ -2.2
NKX2-1P43699 Y_RNA.199-201ENST00000364014 102 ntBASIC1.31□□□□□ -2.2
NKX2-1P43699 Y_RNA.257-201ENST00000364596 102 ntBASIC1.31□□□□□ -2.2
NKX2-1P43699 RNU4-17P-201ENST00000365598 141 ntBASIC1.31□□□□□ -2.2
NKX2-1P43699 Y_RNA.515-201ENST00000384535 112 ntBASIC1.31□□□□□ -2.2
NKX2-1P43699 SNORA40.18-201ENST00000391200 128 ntBASIC1.31□□□□□ -2.2
NKX2-1P43699 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.31□□□□□ -2.2
NKX2-1P43699 AC023790.1-201ENST00000482174 347 ntBASIC1.31□□□□□ -2.2
NKX2-1P43699 RNA5SP153-201ENST00000516498 76 ntBASIC1.31□□□□□ -2.2
NKX2-1P43699 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.31□□□□□ -2.2
NKX2-1P43699 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.31□□□□□ -2.2
NKX2-1P43699 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
NKX2-1P43699 Y_RNA.7-201ENST00000362352 102 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 Y_RNA.83-201ENST00000363005 113 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 snoU2_19.4-201ENST00000364329 80 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 RNU6-200P-201ENST00000364743 107 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 MIR452-201ENST00000385020 85 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 RPS27P16-201ENST00000425758 201 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 AC245047.8-201ENST00000456455 284 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 RN7SL429P-201ENST00000479090 223 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 RN7SL489P-201ENST00000486185 223 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 RN7SL327P-201ENST00000488659 223 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 AC114811.1-201ENST00000507207 168 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 RNU7-12P-201ENST00000516030 62 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 AC090049.2-201ENST00000550377 109 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 AL365434.2-201ENST00000607979 234 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 RN7SL853P-201ENST00000617250 223 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.3□□□□□ -2.2
NKX2-1P43699 MIR411-201ENST00000362239 96 ntBASIC1.29□□□□□ -2.2
NKX2-1P43699 RNU6-442P-201ENST00000383968 104 ntBASIC1.29□□□□□ -2.2
NKX2-1P43699 U8.13-201ENST00000390842 128 ntBASIC1.29□□□□□ -2.2
NKX2-1P43699 RNU6-918P-201ENST00000391219 106 ntBASIC1.29□□□□□ -2.2
NKX2-1P43699 SNORA26-201ENST00000391286 122 ntBASIC1.29□□□□□ -2.2
NKX2-1P43699 SCARNA8-201ENST00000515924 131 ntBASIC1.29□□□□□ -2.2
NKX2-1P43699 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.29□□□□□ -2.2
NKX2-1P43699 AC130289.1-201ENST00000577321 73 ntBASIC1.29□□□□□ -2.2
NKX2-1P43699 AC084768.2-201ENST00000622736 221 ntBASIC1.29□□□□□ -2.2
NKX2-1P43699 RNU6-1084P-201ENST00000362498 107 ntBASIC1.28□□□□□ -2.2
NKX2-1P43699 RNU6-163P-201ENST00000384396 106 ntBASIC1.28□□□□□ -2.2
NKX2-1P43699 MIR15B-201ENST00000385045 98 ntBASIC1.28□□□□□ -2.2
NKX2-1P43699 MIR320A-201ENST00000385302 82 ntBASIC1.28□□□□□ -2.2
NKX2-1P43699 Y_RNA.587-201ENST00000391210 103 ntBASIC1.28□□□□□ -2.2
NKX2-1P43699 SNRPGP8-201ENST00000454064 226 ntBASIC1.28□□□□□ -2.2
NKX2-1P43699 RNU7-149P-201ENST00000516739 59 ntBASIC1.28□□□□□ -2.2
NKX2-1P43699 MIR4744-201ENST00000581563 82 ntBASIC1.28□□□□□ -2.2
NKX2-1P43699 MIR3945-201ENST00000581853 98 ntBASIC1.28□□□□□ -2.2
NKX2-1P43699 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
NKX2-1P43699 Y_RNA.75-201ENST00000362927 97 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 SNORD14E-201ENST00000364009 85 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 RNU6-268P-201ENST00000364174 107 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 RNU4-10P-201ENST00000364383 140 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 Y_RNA.238-201ENST00000364441 102 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 SNORD24-201ENST00000383884 75 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 RNU6-484P-201ENST00000384016 107 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 AL138752.1-201ENST00000452964 351 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 RNU6-322P-201ENST00000516010 103 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 RNU6-295P-201ENST00000516901 104 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 RNU6-388P-201ENST00000517012 105 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 RNU6-389P-201ENST00000517048 105 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 AC019176.1-201ENST00000518519 225 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 AL512310.8-201ENST00000550183 120 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 MIR3664-201ENST00000579074 99 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 MIR4308-201ENST00000580634 81 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 MIR502-201ENST00000606349 86 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 MIR8081-201ENST00000611533 95 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 MIR6845-201ENST00000613182 61 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 MIR6715A-201ENST00000615929 79 ntBASIC1.27□□□□□ -2.21
NKX2-1P43699 RNU6-312P-201ENST00000364629 107 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms