Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 SNORD116-15-201ENST00000384445 92 ntBASIC2.44□□□□□ -2.02
LTBRP36941 SNORD116-19-201ENST00000384729 92 ntBASIC2.44□□□□□ -2.02
LTBRP36941 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LTBRP36941 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LTBRP36941 SNORA48.1-201ENST00000390879 135 ntBASIC2.44□□□□□ -2.02
LTBRP36941 RNU6-1333P-201ENST00000516162 93 ntBASIC2.44□□□□□ -2.02
LTBRP36941 MIR5007-201ENST00000583098 95 ntBASIC2.44□□□□□ -2.02
LTBRP36941 ICE2P2-201ENST00000483823 2787 ntBASIC2.44□□□□□ -2.02
LTBRP36941 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
LTBRP36941 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LTBRP36941 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LTBRP36941 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LTBRP36941 Y_RNA.140-201ENST00000363474 103 ntBASIC2.43□□□□□ -2.02
LTBRP36941 SNORA63D-201ENST00000364359 132 ntBASIC2.43□□□□□ -2.02
LTBRP36941 SNORD18B-201ENST00000365659 72 ntBASIC2.43□□□□□ -2.02
LTBRP36941 RNU6-80P-201ENST00000384195 107 ntBASIC2.43□□□□□ -2.02
LTBRP36941 U8.13-201ENST00000390842 128 ntBASIC2.43□□□□□ -2.02
LTBRP36941 RN7SKP200-201ENST00000410564 320 ntBASIC2.43□□□□□ -2.02
LTBRP36941 RNU2-7P-201ENST00000410794 178 ntBASIC2.43□□□□□ -2.02
LTBRP36941 RNA5SP501-201ENST00000410990 112 ntBASIC2.43□□□□□ -2.02
LTBRP36941 AL158823.1-201ENST00000418441 478 ntBASIC2.43□□□□□ -2.02
LTBRP36941 MIR4446-201ENST00000578505 67 ntBASIC2.43□□□□□ -2.02
LTBRP36941 Y_RNA.757-201ENST00000578934 114 ntBASIC2.43□□□□□ -2.02
LTBRP36941 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.43□□□□□ -2.02
LTBRP36941 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
LTBRP36941 AC092881.1-201ENST00000638218 2733 ntBASIC2.43□□□□□ -2.02
LTBRP36941 Y_RNA.52-201ENST00000362760 96 ntBASIC2.42□□□□□ -2.02
LTBRP36941 VTRNA1-1-201ENST00000363120 99 ntBASIC2.42□□□□□ -2.02
LTBRP36941 SNORA3A-201ENST00000364113 130 ntBASIC2.42□□□□□ -2.02
LTBRP36941 Y_RNA.294-201ENST00000364916 102 ntBASIC2.42□□□□□ -2.02
LTBRP36941 SNORA80E-201ENST00000384744 137 ntBASIC2.42□□□□□ -2.02
LTBRP36941 AL023284.1-201ENST00000403956 276 ntBASIC2.42□□□□□ -2.02
LTBRP36941 MIR548O-201ENST00000408583 114 ntBASIC2.42□□□□□ -2.02
LTBRP36941 SUMO1P4-201ENST00000429430 302 ntBASIC2.42□□□□□ -2.02
LTBRP36941 RNU4-57P-201ENST00000515980 135 ntBASIC2.42□□□□□ -2.02
LTBRP36941 Y_RNA.692-201ENST00000516627 105 ntBASIC2.42□□□□□ -2.02
LTBRP36941 MIR5092-201ENST00000583139 88 ntBASIC2.42□□□□□ -2.02
LTBRP36941 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.42□□□□□ -2.02
LTBRP36941 AC006441.5-201ENST00000612680 209 ntBASIC2.42□□□□□ -2.02
LTBRP36941 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LTBRP36941 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
LTBRP36941 RNU6-1290P-201ENST00000362957 109 ntBASIC2.41□□□□□ -2.02
LTBRP36941 Y_RNA.118-201ENST00000363300 101 ntBASIC2.41□□□□□ -2.02
LTBRP36941 RNU6-268P-201ENST00000364174 107 ntBASIC2.41□□□□□ -2.02
LTBRP36941 Y_RNA.336-201ENST00000365307 109 ntBASIC2.41□□□□□ -2.02
LTBRP36941 SNORA4.2-201ENST00000365313 147 ntBASIC2.41□□□□□ -2.02
LTBRP36941 RNU6-1292P-201ENST00000383856 107 ntBASIC2.41□□□□□ -2.02
LTBRP36941 RNU1-52P-201ENST00000384190 164 ntBASIC2.41□□□□□ -2.02
LTBRP36941 RNU6-950P-201ENST00000384651 107 ntBASIC2.41□□□□□ -2.02
LTBRP36941 MIR520A-201ENST00000384862 85 ntBASIC2.41□□□□□ -2.02
LTBRP36941 MIR548A2-201ENST00000384956 97 ntBASIC2.41□□□□□ -2.02
LTBRP36941 MIR518F-201ENST00000384973 87 ntBASIC2.41□□□□□ -2.02
LTBRP36941 MIR181B1-201ENST00000385240 110 ntBASIC2.41□□□□□ -2.02
LTBRP36941 AL034345.1-201ENST00000407768 123 ntBASIC2.41□□□□□ -2.02
LTBRP36941 HMGN2P32-201ENST00000444648 269 ntBASIC2.41□□□□□ -2.02
LTBRP36941 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.41□□□□□ -2.02
LTBRP36941 AC114811.1-201ENST00000507207 168 ntBASIC2.41□□□□□ -2.02
LTBRP36941 RNU6-1116P-201ENST00000517269 99 ntBASIC2.41□□□□□ -2.02
LTBRP36941 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.41□□□□□ -2.02
LTBRP36941 MIR219B-201ENST00000637023 88 ntBASIC2.41□□□□□ -2.02
LTBRP36941 RNU6-163P-201ENST00000384396 106 ntBASIC2.4□□□□□ -2.03
LTBRP36941 SNORA26.9-201ENST00000391322 122 ntBASIC2.4□□□□□ -2.03
LTBRP36941 MIR891A-201ENST00000401237 79 ntBASIC2.4□□□□□ -2.03
LTBRP36941 SNRPGP14-201ENST00000435400 219 ntBASIC2.4□□□□□ -2.03
LTBRP36941 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LTBRP36941 Y_RNA.690-201ENST00000516603 95 ntBASIC2.4□□□□□ -2.03
LTBRP36941 RNU6-295P-201ENST00000516901 104 ntBASIC2.4□□□□□ -2.03
LTBRP36941 RNU2-60P-201ENST00000517290 128 ntBASIC2.4□□□□□ -2.03
LTBRP36941 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.4□□□□□ -2.03
LTBRP36941 SUB1P4-201ENST00000566062 339 ntBASIC2.4□□□□□ -2.03
LTBRP36941 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
LTBRP36941 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.4□□□□□ -2.03
LTBRP36941 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
LTBRP36941 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
LTBRP36941 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.39□□□□□ -2.03
LTBRP36941 RNU6-235P-201ENST00000362644 107 ntBASIC2.39□□□□□ -2.03
LTBRP36941 RNA5SP205-201ENST00000364653 136 ntBASIC2.39□□□□□ -2.03
LTBRP36941 SNORD77.3-201ENST00000391113 65 ntBASIC2.39□□□□□ -2.03
LTBRP36941 AL603914.1-201ENST00000401964 204 ntBASIC2.39□□□□□ -2.03
LTBRP36941 AL590004.2-201ENST00000404787 371 ntBASIC2.39□□□□□ -2.03
LTBRP36941 SNORD88.1-201ENST00000408684 91 ntBASIC2.39□□□□□ -2.03
LTBRP36941 CALM2P4-201ENST00000430810 426 ntBASIC2.39□□□□□ -2.03
LTBRP36941 RPL23AP63-201ENST00000498752 471 ntBASIC2.39□□□□□ -2.03
LTBRP36941 CYCTP-201ENST00000504253 315 ntBASIC2.39□□□□□ -2.03
LTBRP36941 RNU5E-3P-201ENST00000515913 68 ntBASIC2.39□□□□□ -2.03
LTBRP36941 RNU7-25P-201ENST00000516544 62 ntBASIC2.39□□□□□ -2.03
LTBRP36941 RNU7-193P-201ENST00000516723 65 ntBASIC2.39□□□□□ -2.03
LTBRP36941 RNA5SP437-201ENST00000517249 129 ntBASIC2.39□□□□□ -2.03
LTBRP36941 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.39□□□□□ -2.03
LTBRP36941 MIR4498-201ENST00000577599 66 ntBASIC2.39□□□□□ -2.03
LTBRP36941 AC067747.1-201ENST00000608026 250 ntBASIC2.39□□□□□ -2.03
LTBRP36941 MIRLET7C-201ENST00000362160 84 ntBASIC2.38□□□□□ -2.03
LTBRP36941 RNU1-17P-201ENST00000363022 152 ntBASIC2.38□□□□□ -2.03
LTBRP36941 RNU1-51P-201ENST00000365345 176 ntBASIC2.38□□□□□ -2.03
LTBRP36941 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LTBRP36941 MIR221-201ENST00000385135 110 ntBASIC2.38□□□□□ -2.03
LTBRP36941 RNU6-735P-201ENST00000410612 107 ntBASIC2.38□□□□□ -2.03
LTBRP36941 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.38□□□□□ -2.03
LTBRP36941 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.38□□□□□ -2.03
LTBRP36941 AF228730.3-201ENST00000436691 102 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms