Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 Y_RNA.703-201ENST00000516846 111 ntBASIC1.68□□□□□ -2.14
KRT9P35527 MRPS18CP4-201ENST00000535821 231 ntBASIC1.68□□□□□ -2.14
KRT9P35527 MIR3133-201ENST00000583157 78 ntBASIC1.68□□□□□ -2.14
KRT9P35527 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.68□□□□□ -2.14
KRT9P35527 AL121890.5-201ENST00000620848 304 ntBASIC1.68□□□□□ -2.14
KRT9P35527 AL513423.1-201ENST00000621695 132 ntBASIC1.68□□□□□ -2.14
KRT9P35527 U2.22-201ENST00000636441 106 ntBASIC1.68□□□□□ -2.14
KRT9P35527 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRT9P35527 RNU6-653P-201ENST00000363074 106 ntBASIC1.67□□□□□ -2.14
KRT9P35527 RNA5SP190-201ENST00000365222 118 ntBASIC1.67□□□□□ -2.14
KRT9P35527 Y_RNA.435-201ENST00000384095 112 ntBASIC1.67□□□□□ -2.14
KRT9P35527 RNU6-763P-201ENST00000390865 106 ntBASIC1.67□□□□□ -2.14
KRT9P35527 RPS20P10-201ENST00000451209 253 ntBASIC1.67□□□□□ -2.14
KRT9P35527 U8.19-201ENST00000459095 133 ntBASIC1.67□□□□□ -2.14
KRT9P35527 SNORD13-201ENST00000459299 104 ntBASIC1.67□□□□□ -2.14
KRT9P35527 AC023790.1-201ENST00000482174 347 ntBASIC1.67□□□□□ -2.14
KRT9P35527 SNORA70.12-201ENST00000516084 153 ntBASIC1.67□□□□□ -2.14
KRT9P35527 RNU6-63P-201ENST00000516690 95 ntBASIC1.67□□□□□ -2.14
KRT9P35527 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.67□□□□□ -2.14
KRT9P35527 MIR4308-201ENST00000580634 81 ntBASIC1.67□□□□□ -2.14
KRT9P35527 AL008718.3-201ENST00000610217 321 ntBASIC1.67□□□□□ -2.14
KRT9P35527 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRT9P35527 Y_RNA.7-201ENST00000362352 102 ntBASIC1.66□□□□□ -2.14
KRT9P35527 Y_RNA.8-201ENST00000362353 102 ntBASIC1.66□□□□□ -2.14
KRT9P35527 RNU6-457P-201ENST00000363999 107 ntBASIC1.66□□□□□ -2.14
KRT9P35527 Y_RNA.265-201ENST00000364677 108 ntBASIC1.66□□□□□ -2.14
KRT9P35527 Y_RNA.341-201ENST00000365341 102 ntBASIC1.66□□□□□ -2.14
KRT9P35527 Y_RNA.506-201ENST00000384494 102 ntBASIC1.66□□□□□ -2.14
KRT9P35527 RNU6-1065P-201ENST00000384513 106 ntBASIC1.66□□□□□ -2.14
KRT9P35527 MIR520G-201ENST00000385064 90 ntBASIC1.66□□□□□ -2.14
KRT9P35527 MIR1304-201ENST00000408243 91 ntBASIC1.66□□□□□ -2.14
KRT9P35527 MIR1287-201ENST00000408492 90 ntBASIC1.66□□□□□ -2.14
KRT9P35527 RNU6-855P-201ENST00000410395 104 ntBASIC1.66□□□□□ -2.14
KRT9P35527 RNU1-98P-201ENST00000458992 160 ntBASIC1.66□□□□□ -2.14
KRT9P35527 RNU6-1219P-201ENST00000516143 112 ntBASIC1.66□□□□□ -2.14
KRT9P35527 RNU6-1291P-201ENST00000516591 104 ntBASIC1.66□□□□□ -2.14
KRT9P35527 AP002004.2-201ENST00000531656 154 ntBASIC1.66□□□□□ -2.14
KRT9P35527 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.66□□□□□ -2.14
KRT9P35527 BX248123.2-201ENST00000606318 124 ntBASIC1.66□□□□□ -2.14
KRT9P35527 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.66□□□□□ -2.14
KRT9P35527 AL078604.3-201ENST00000615580 211 ntBASIC1.66□□□□□ -2.14
KRT9P35527 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.66□□□□□ -2.14
KRT9P35527 AC021753.1-201ENST00000635724 168 ntBASIC1.66□□□□□ -2.14
KRT9P35527 SNORA1B-201ENST00000362535 133 ntBASIC1.65□□□□□ -2.15
KRT9P35527 RNU6-801P-201ENST00000364087 105 ntBASIC1.65□□□□□ -2.15
KRT9P35527 Y_RNA.293-201ENST00000364908 93 ntBASIC1.65□□□□□ -2.15
KRT9P35527 RNU6-187P-201ENST00000384139 106 ntBASIC1.65□□□□□ -2.15
KRT9P35527 RNU6-804P-201ENST00000384286 107 ntBASIC1.65□□□□□ -2.15
KRT9P35527 RNU6-125P-201ENST00000384505 107 ntBASIC1.65□□□□□ -2.15
KRT9P35527 RNU6-136P-201ENST00000384663 107 ntBASIC1.65□□□□□ -2.15
KRT9P35527 Y_RNA.571-201ENST00000384753 98 ntBASIC1.65□□□□□ -2.15
KRT9P35527 MTCO2P33-201ENST00000402100 465 ntBASIC1.65□□□□□ -2.15
KRT9P35527 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.65□□□□□ -2.15
KRT9P35527 RNU6-1337P-201ENST00000516525 95 ntBASIC1.65□□□□□ -2.15
KRT9P35527 SNORD53B-201ENST00000577887 78 ntBASIC1.65□□□□□ -2.15
KRT9P35527 MIR3144-201ENST00000579460 79 ntBASIC1.65□□□□□ -2.15
KRT9P35527 AC104465.1-201ENST00000611365 139 ntBASIC1.65□□□□□ -2.15
KRT9P35527 AC013791.1-201ENST00000616619 62 ntBASIC1.65□□□□□ -2.15
KRT9P35527 SNORD3E-202ENST00000627253 216 ntBASIC1.65□□□□□ -2.15
KRT9P35527 AC134026.1-201ENST00000623249 2239 ntBASIC1.64□□□□□ -2.15
KRT9P35527 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
KRT9P35527 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRT9P35527 AL157777.2-201ENST00000258070 137 ntBASIC1.64□□□□□ -2.15
KRT9P35527 Y_RNA.170-201ENST00000363746 110 ntBASIC1.64□□□□□ -2.15
KRT9P35527 Y_RNA.182-201ENST00000363880 111 ntBASIC1.64□□□□□ -2.15
KRT9P35527 RNU6-899P-201ENST00000363947 107 ntBASIC1.64□□□□□ -2.15
KRT9P35527 RNU6-312P-201ENST00000364629 107 ntBASIC1.64□□□□□ -2.15
KRT9P35527 Y_RNA.357-201ENST00000365487 109 ntBASIC1.64□□□□□ -2.15
KRT9P35527 RNU4-17P-201ENST00000365598 141 ntBASIC1.64□□□□□ -2.15
KRT9P35527 Y_RNA.456-201ENST00000384232 111 ntBASIC1.64□□□□□ -2.15
KRT9P35527 SNORA19-201ENST00000384737 128 ntBASIC1.64□□□□□ -2.15
KRT9P35527 MIR660-201ENST00000385235 97 ntBASIC1.64□□□□□ -2.15
KRT9P35527 SNORA26.5-201ENST00000391215 123 ntBASIC1.64□□□□□ -2.15
KRT9P35527 RNU6-394P-201ENST00000410735 107 ntBASIC1.64□□□□□ -2.15
KRT9P35527 SNX2P2-201ENST00000424553 323 ntBASIC1.64□□□□□ -2.15
KRT9P35527 AL135790.2-201ENST00000437701 267 ntBASIC1.64□□□□□ -2.15
KRT9P35527 HSPE1P13-201ENST00000451143 297 ntBASIC1.64□□□□□ -2.15
KRT9P35527 RNU7-28P-201ENST00000516759 62 ntBASIC1.64□□□□□ -2.15
KRT9P35527 RNU6-1096P-201ENST00000517089 102 ntBASIC1.64□□□□□ -2.15
KRT9P35527 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.64□□□□□ -2.15
KRT9P35527 MIR3910-1-201ENST00000580936 111 ntBASIC1.64□□□□□ -2.15
KRT9P35527 RNU2-4P-201ENST00000606190 192 ntBASIC1.64□□□□□ -2.15
KRT9P35527 AP000648.3-201ENST00000623539 4507 ntBASIC1.63□□□□□ -2.15
KRT9P35527 Y_RNA.121-201ENST00000363309 113 ntBASIC1.63□□□□□ -2.15
KRT9P35527 Y_RNA.368-201ENST00000365547 113 ntBASIC1.63□□□□□ -2.15
KRT9P35527 RNY1P5-201ENST00000383890 115 ntBASIC1.63□□□□□ -2.15
KRT9P35527 SNORA72.4-201ENST00000384174 132 ntBASIC1.63□□□□□ -2.15
KRT9P35527 SNORA8.3-201ENST00000384679 139 ntBASIC1.63□□□□□ -2.15
KRT9P35527 MIR517C-201ENST00000385103 95 ntBASIC1.63□□□□□ -2.15
KRT9P35527 MIR1323-201ENST00000408090 73 ntBASIC1.63□□□□□ -2.15
KRT9P35527 RNU6-1135P-201ENST00000411083 103 ntBASIC1.63□□□□□ -2.15
KRT9P35527 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.63□□□□□ -2.15
KRT9P35527 AC233266.1-201ENST00000454518 96 ntBASIC1.63□□□□□ -2.15
KRT9P35527 OR9P1P-201ENST00000496431 281 ntBASIC1.63□□□□□ -2.15
KRT9P35527 Y_RNA.797-201ENST00000515977 94 ntBASIC1.63□□□□□ -2.15
KRT9P35527 AC108706.1-201ENST00000611053 297 ntBASIC1.63□□□□□ -2.15
KRT9P35527 AC242852.1-201ENST00000612151 96 ntBASIC1.63□□□□□ -2.15
KRT9P35527 AC244015.1-201ENST00000622301 99 ntBASIC1.63□□□□□ -2.15
KRT9P35527 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.63□□□□□ -2.15
KRT9P35527 RNU6-1205P-201ENST00000363625 106 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms