Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 AL356274.2-201ENST00000624379 3752 ntBASIC3.14□□□□□ -1.91
GPC1P35052 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
GPC1P35052 AC093010.3-201ENST00000570269 15214 ntBASIC3.14□□□□□ -1.91
GPC1P35052 MIR148B-201ENST00000362252 99 ntBASIC3.13□□□□□ -1.91
GPC1P35052 Y_RNA.470-201ENST00000384307 117 ntBASIC3.13□□□□□ -1.91
GPC1P35052 SNORA11.4-201ENST00000408823 129 ntBASIC3.13□□□□□ -1.91
GPC1P35052 RN7SKP192-201ENST00000411291 327 ntBASIC3.13□□□□□ -1.91
GPC1P35052 RNU6-521P-201ENST00000516663 105 ntBASIC3.13□□□□□ -1.91
GPC1P35052 RNA5SP380-201ENST00000517190 98 ntBASIC3.13□□□□□ -1.91
GPC1P35052 SNORA31.26-201ENST00000517250 137 ntBASIC3.13□□□□□ -1.91
GPC1P35052 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.13□□□□□ -1.91
GPC1P35052 AC103810.6-201ENST00000606708 136 ntBASIC3.13□□□□□ -1.91
GPC1P35052 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
GPC1P35052 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GPC1P35052 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.13□□□□□ -1.91
GPC1P35052 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GPC1P35052 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GPC1P35052 MIRLET7C-201ENST00000362160 84 ntBASIC3.12□□□□□ -1.91
GPC1P35052 SNORA63.1-201ENST00000362493 131 ntBASIC3.12□□□□□ -1.91
GPC1P35052 RNA5SP119-201ENST00000362715 117 ntBASIC3.12□□□□□ -1.91
GPC1P35052 RNA5SP383-201ENST00000362934 120 ntBASIC3.12□□□□□ -1.91
GPC1P35052 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.12□□□□□ -1.91
GPC1P35052 MIR3152-201ENST00000579801 74 ntBASIC3.12□□□□□ -1.91
GPC1P35052 MIR4276-201ENST00000584832 70 ntBASIC3.12□□□□□ -1.91
GPC1P35052 AC096720.1-201ENST00000604441 183 ntBASIC3.12□□□□□ -1.91
GPC1P35052 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.12□□□□□ -1.91
GPC1P35052 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GPC1P35052 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
GPC1P35052 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GPC1P35052 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.12□□□□□ -1.91
GPC1P35052 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
GPC1P35052 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
GPC1P35052 SNORA22.1-201ENST00000362701 134 ntBASIC3.11□□□□□ -1.91
GPC1P35052 SNORD56.3-201ENST00000363507 71 ntBASIC3.11□□□□□ -1.91
GPC1P35052 SNORD46.1-201ENST00000364139 104 ntBASIC3.11□□□□□ -1.91
GPC1P35052 Y_RNA.377-201ENST00000365644 108 ntBASIC3.11□□□□□ -1.91
GPC1P35052 RNY1P4-201ENST00000384595 115 ntBASIC3.11□□□□□ -1.91
GPC1P35052 RNU6-279P-201ENST00000391297 101 ntBASIC3.11□□□□□ -1.91
GPC1P35052 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.11□□□□□ -1.91
GPC1P35052 RN7SL601P-201ENST00000471221 293 ntBASIC3.11□□□□□ -1.91
GPC1P35052 RNU6-857P-201ENST00000515893 110 ntBASIC3.11□□□□□ -1.91
GPC1P35052 RNU6-958P-201ENST00000516995 106 ntBASIC3.11□□□□□ -1.91
GPC1P35052 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.11□□□□□ -1.91
GPC1P35052 MIR3169-201ENST00000578032 83 ntBASIC3.11□□□□□ -1.91
GPC1P35052 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.11□□□□□ -1.91
GPC1P35052 AC019176.2-201ENST00000611579 315 ntBASIC3.11□□□□□ -1.91
GPC1P35052 AC027279.3-201ENST00000625055 122 ntBASIC3.11□□□□□ -1.91
GPC1P35052 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
GPC1P35052 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
GPC1P35052 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.11□□□□□ -1.91
GPC1P35052 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
GPC1P35052 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
GPC1P35052 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
GPC1P35052 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
GPC1P35052 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
GPC1P35052 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
GPC1P35052 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
GPC1P35052 RNU6-219P-201ENST00000364728 107 ntBASIC3.1□□□□□ -1.91
GPC1P35052 SNORA32-201ENST00000384072 121 ntBASIC3.1□□□□□ -1.91
GPC1P35052 RNU6-1319P-201ENST00000390855 104 ntBASIC3.1□□□□□ -1.91
GPC1P35052 RNU6-747P-201ENST00000390928 104 ntBASIC3.1□□□□□ -1.91
GPC1P35052 RNU6-241P-201ENST00000391148 104 ntBASIC3.1□□□□□ -1.91
GPC1P35052 MIR1289-1-201ENST00000408836 144 ntBASIC3.1□□□□□ -1.91
GPC1P35052 RNU6-177P-201ENST00000411257 104 ntBASIC3.1□□□□□ -1.91
GPC1P35052 AC069257.2-201ENST00000441819 155 ntBASIC3.1□□□□□ -1.91
GPC1P35052 RNU7-67P-201ENST00000459003 62 ntBASIC3.1□□□□□ -1.91
GPC1P35052 RNU6-65P-201ENST00000516332 98 ntBASIC3.1□□□□□ -1.91
GPC1P35052 RNU6-1018P-201ENST00000516577 106 ntBASIC3.1□□□□□ -1.91
GPC1P35052 MIR4668-201ENST00000582284 70 ntBASIC3.1□□□□□ -1.91
GPC1P35052 AC012314.7-201ENST00000619693 93 ntBASIC3.1□□□□□ -1.91
GPC1P35052 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
GPC1P35052 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
GPC1P35052 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
GPC1P35052 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
GPC1P35052 Y_RNA.333-201ENST00000365274 102 ntBASIC3.09□□□□□ -1.91
GPC1P35052 MIR516B2-201ENST00000385190 85 ntBASIC3.09□□□□□ -1.91
GPC1P35052 AC104332.2-201ENST00000429959 156 ntBASIC3.09□□□□□ -1.91
GPC1P35052 RNU7-34P-201ENST00000459394 64 ntBASIC3.09□□□□□ -1.91
GPC1P35052 RPPH1-2P-201ENST00000516688 293 ntBASIC3.09□□□□□ -1.91
GPC1P35052 MIR4666B-201ENST00000578142 81 ntBASIC3.09□□□□□ -1.91
GPC1P35052 MIR3944-201ENST00000581277 108 ntBASIC3.09□□□□□ -1.91
GPC1P35052 ELOCP29-201ENST00000588193 334 ntBASIC3.09□□□□□ -1.91
GPC1P35052 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
GPC1P35052 RNU1-70P-201ENST00000362618 164 ntBASIC3.08□□□□□ -1.92
GPC1P35052 RNU6-1296P-201ENST00000383879 107 ntBASIC3.08□□□□□ -1.92
GPC1P35052 Y_RNA.426-201ENST00000384068 113 ntBASIC3.08□□□□□ -1.92
GPC1P35052 MIR7-3-201ENST00000384898 110 ntBASIC3.08□□□□□ -1.92
GPC1P35052 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
GPC1P35052 SNORA26.7-201ENST00000391288 122 ntBASIC3.08□□□□□ -1.92
GPC1P35052 RN7SKP220-201ENST00000410611 288 ntBASIC3.08□□□□□ -1.92
GPC1P35052 Y_RNA.611-201ENST00000410682 108 ntBASIC3.08□□□□□ -1.92
GPC1P35052 RNU2-40P-201ENST00000410833 196 ntBASIC3.08□□□□□ -1.92
GPC1P35052 RPL32P35-201ENST00000415214 394 ntBASIC3.08□□□□□ -1.92
GPC1P35052 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.08□□□□□ -1.92
GPC1P35052 AC115115.1-201ENST00000449927 248 ntBASIC3.08□□□□□ -1.92
GPC1P35052 RNU7-171P-201ENST00000459581 62 ntBASIC3.08□□□□□ -1.92
GPC1P35052 SNORD115-2-201ENST00000362842 82 ntBASIC3.07□□□□□ -1.92
GPC1P35052 SNORA1.1-201ENST00000364671 133 ntBASIC3.07□□□□□ -1.92
GPC1P35052 SNORD115-20-201ENST00000365099 82 ntBASIC3.07□□□□□ -1.92
GPC1P35052 SNORA1.2-201ENST00000365189 134 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms