Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 MIR4636-201ENST00000582271 80 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 AC008507.4-201ENST00000585464 127 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 AC245008.1-201ENST00000608123 476 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 RN7SL660P-201ENST00000614852 299 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 AP001282.2-201ENST00000616149 309 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 SNORA63.5-201ENST00000363548 123 ntBASIC-0.94□□□□□ -2.56
SDC4P31431 RNU6-674P-201ENST00000363831 107 ntBASIC-0.94□□□□□ -2.56
SDC4P31431 RNU4-20P-201ENST00000365601 151 ntBASIC-0.94□□□□□ -2.56
SDC4P31431 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.94□□□□□ -2.56
SDC4P31431 AL031003.1-201ENST00000404229 172 ntBASIC-0.94□□□□□ -2.56
SDC4P31431 AL593851.1-201ENST00000426171 157 ntBASIC-0.94□□□□□ -2.56
SDC4P31431 RPL7P42-201ENST00000481005 679 ntBASIC-0.94□□□□□ -2.56
SDC4P31431 RNU7-25P-201ENST00000516544 62 ntBASIC-0.94□□□□□ -2.56
SDC4P31431 MIR3913-1-201ENST00000577744 102 ntBASIC-0.94□□□□□ -2.56
SDC4P31431 AC109347.2-201ENST00000610220 349 ntBASIC-0.94□□□□□ -2.56
SDC4P31431 AC006441.5-201ENST00000612680 209 ntBASIC-0.94□□□□□ -2.56
SDC4P31431 RNU6-490P-201ENST00000362985 107 ntBASIC-0.95□□□□□ -2.56
SDC4P31431 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.95□□□□□ -2.56
SDC4P31431 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.95□□□□□ -2.56
SDC4P31431 SNORA72.6-201ENST00000384520 129 ntBASIC-0.95□□□□□ -2.56
SDC4P31431 RNU6-248P-201ENST00000410720 107 ntBASIC-0.95□□□□□ -2.56
SDC4P31431 MTND4P19-201ENST00000446659 478 ntBASIC-0.95□□□□□ -2.56
SDC4P31431 U8.19-201ENST00000459095 133 ntBASIC-0.95□□□□□ -2.56
SDC4P31431 U8.22-201ENST00000459141 133 ntBASIC-0.95□□□□□ -2.56
SDC4P31431 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.95□□□□□ -2.56
SDC4P31431 RNU6-765P-201ENST00000516916 99 ntBASIC-0.95□□□□□ -2.56
SDC4P31431 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.95□□□□□ -2.56
SDC4P31431 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.95□□□□□ -2.56
SDC4P31431 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.95□□□□□ -2.56
SDC4P31431 AC096720.1-201ENST00000604441 183 ntBASIC-0.95□□□□□ -2.56
SDC4P31431 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 RNU4-66P-201ENST00000365199 138 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 RNU6-95P-201ENST00000384697 107 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 MIR517A-201ENST00000385001 87 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 MIR548L-201ENST00000408303 86 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 RNU2-61P-201ENST00000411069 191 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.96□□□□□ -2.56
SDC4P31431 BX276092.1-201ENST00000427368 251 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 MTATP6P13-201ENST00000438531 667 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 AC107297.1-201ENST00000459991 176 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.96□□□□□ -2.56
SDC4P31431 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.96□□□□□ -2.56
SDC4P31431 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.96□□□□□ -2.56
SDC4P31431 SNORA40.9-201ENST00000515895 93 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 AL158050.2-201ENST00000605336 568 ntBASIC-0.96□□□□□ -2.56
SDC4P31431 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.97□□□□□ -2.56
SDC4P31431 RNU6-597P-201ENST00000365620 102 ntBASIC-0.97□□□□□ -2.56
SDC4P31431 MIR516B1-201ENST00000385211 90 ntBASIC-0.97□□□□□ -2.56
SDC4P31431 MIR1278-201ENST00000408753 81 ntBASIC-0.97□□□□□ -2.56
SDC4P31431 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.97□□□□□ -2.56
SDC4P31431 SNORA25.16-201ENST00000516741 121 ntBASIC-0.97□□□□□ -2.56
SDC4P31431 AC087685.1-201ENST00000587507 141 ntBASIC-0.97□□□□□ -2.56
SDC4P31431 AC018638.8-201ENST00000588755 281 ntBASIC-0.97□□□□□ -2.56
SDC4P31431 JPX_2.1-201ENST00000614161 69 ntBASIC-0.97□□□□□ -2.56
SDC4P31431 AC004467.1-201ENST00000615678 330 ntBASIC-0.97□□□□□ -2.56
SDC4P31431 SNORD114-14-201ENST00000362723 75 ntBASIC-0.98□□□□□ -2.57
SDC4P31431 RNU6-879P-201ENST00000364328 108 ntBASIC-0.98□□□□□ -2.57
SDC4P31431 CHEK2P4-201ENST00000450340 246 ntBASIC-0.98□□□□□ -2.57
SDC4P31431 AC007751.1-201ENST00000529260 376 ntBASIC-0.98□□□□□ -2.57
SDC4P31431 AC063944.3-201ENST00000609969 533 ntBASIC-0.98□□□□□ -2.57
SDC4P31431 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.98□□□□□ -2.57
SDC4P31431 SNORD115-34-201ENST00000362441 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-12-201ENST00000362583 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-29-201ENST00000362834 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-9-201ENST00000362912 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-21-201ENST00000362963 81 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-14-201ENST00000363090 81 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-13-201ENST00000363358 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-41-201ENST00000363608 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-11-201ENST00000363616 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-5-201ENST00000363633 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-39-201ENST00000363694 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-4-201ENST00000363810 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-16-201ENST00000363887 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-6-201ENST00000363942 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-42-201ENST00000364273 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-15-201ENST00000364809 81 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-1-201ENST00000364961 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-26-201ENST00000365067 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-10-201ENST00000365073 81 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-43-201ENST00000365503 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD115-36-201ENST00000365629 82 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 RNU6-926P-201ENST00000384075 107 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 RNU6-318P-201ENST00000384283 103 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 MIR604-201ENST00000384880 94 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 RPL39P25-201ENST00000449384 154 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 RNU6-437P-201ENST00000459408 95 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 SNORD42A-201ENST00000459584 64 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 AC083904.1-201ENST00000487828 231 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 ACA59.1-201ENST00000515966 143 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 RNU7-161P-201ENST00000517289 62 ntBASIC-0.99□□□□□ -2.57
SDC4P31431 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.99□□□□□ -2.57
SDC4P31431 AP000942.4-201ENST00000604811 241 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms