Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.4□□□□□ -2.19
SHC1P29353 MIR3198-2-201ENST00000577868 80 ntBASIC1.4□□□□□ -2.19
SHC1P29353 AL049861.1-201ENST00000603130 150 ntBASIC1.4□□□□□ -2.19
SHC1P29353 RNU6-103P-201ENST00000363686 107 ntBASIC1.39□□□□□ -2.19
SHC1P29353 Y_RNA.253-201ENST00000364562 112 ntBASIC1.39□□□□□ -2.19
SHC1P29353 RNU6-275P-201ENST00000364910 107 ntBASIC1.39□□□□□ -2.19
SHC1P29353 SNORA4.2-201ENST00000365313 147 ntBASIC1.39□□□□□ -2.19
SHC1P29353 RNU6-1062P-201ENST00000383908 107 ntBASIC1.39□□□□□ -2.19
SHC1P29353 RNU6-296P-201ENST00000384608 107 ntBASIC1.39□□□□□ -2.19
SHC1P29353 SNORA12.1-201ENST00000390873 148 ntBASIC1.39□□□□□ -2.19
SHC1P29353 RNU6-440P-201ENST00000390882 105 ntBASIC1.39□□□□□ -2.19
SHC1P29353 RNA5SP496-201ENST00000391240 109 ntBASIC1.39□□□□□ -2.19
SHC1P29353 RNU6-394P-201ENST00000410735 107 ntBASIC1.39□□□□□ -2.19
SHC1P29353 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.39□□□□□ -2.19
SHC1P29353 RNU7-94P-201ENST00000459576 63 ntBASIC1.39□□□□□ -2.19
SHC1P29353 AL049830.1-201ENST00000468034 425 ntBASIC1.39□□□□□ -2.19
SHC1P29353 NDUFA4P2-201ENST00000489989 244 ntBASIC1.39□□□□□ -2.19
SHC1P29353 RNA5SP458-201ENST00000516188 119 ntBASIC1.39□□□□□ -2.19
SHC1P29353 AL358944.1-201ENST00000528537 144 ntBASIC1.39□□□□□ -2.19
SHC1P29353 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.39□□□□□ -2.19
SHC1P29353 AC069114.2-201ENST00000604699 304 ntBASIC1.39□□□□□ -2.19
SHC1P29353 BX248123.2-201ENST00000606318 124 ntBASIC1.39□□□□□ -2.19
SHC1P29353 AC104465.1-201ENST00000611365 139 ntBASIC1.39□□□□□ -2.19
SHC1P29353 AL391903.3-201ENST00000612158 163 ntBASIC1.39□□□□□ -2.19
SHC1P29353 AL591926.4-201ENST00000616895 298 ntBASIC1.39□□□□□ -2.19
SHC1P29353 MIR8054-201ENST00000620877 86 ntBASIC1.39□□□□□ -2.19
SHC1P29353 AC021753.1-201ENST00000635724 168 ntBASIC1.39□□□□□ -2.19
SHC1P29353 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SHC1P29353 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
SHC1P29353 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
SHC1P29353 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.38□□□□□ -2.19
SHC1P29353 Y_RNA.140-201ENST00000363474 103 ntBASIC1.38□□□□□ -2.19
SHC1P29353 RNU6-112P-201ENST00000363599 104 ntBASIC1.38□□□□□ -2.19
SHC1P29353 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
SHC1P29353 SNORA63D-201ENST00000364359 132 ntBASIC1.38□□□□□ -2.19
SHC1P29353 RNU6-312P-201ENST00000364629 107 ntBASIC1.38□□□□□ -2.19
SHC1P29353 RNU6-818P-201ENST00000364837 108 ntBASIC1.38□□□□□ -2.19
SHC1P29353 Y_RNA.441-201ENST00000384123 112 ntBASIC1.38□□□□□ -2.19
SHC1P29353 Y_RNA.464-201ENST00000384282 110 ntBASIC1.38□□□□□ -2.19
SHC1P29353 RNU6-804P-201ENST00000384286 107 ntBASIC1.38□□□□□ -2.19
SHC1P29353 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
SHC1P29353 RNU6-1228P-201ENST00000391014 107 ntBASIC1.38□□□□□ -2.19
SHC1P29353 Y_RNA.622-201ENST00000411091 108 ntBASIC1.38□□□□□ -2.19
SHC1P29353 AC245047.3-201ENST00000429428 127 ntBASIC1.38□□□□□ -2.19
SHC1P29353 SNRPGP10-201ENST00000432323 225 ntBASIC1.38□□□□□ -2.19
SHC1P29353 SEPT7P4-201ENST00000437076 306 ntBASIC1.38□□□□□ -2.19
SHC1P29353 HSPE1P9-201ENST00000440046 311 ntBASIC1.38□□□□□ -2.19
SHC1P29353 AC023790.1-201ENST00000482174 347 ntBASIC1.38□□□□□ -2.19
SHC1P29353 HMGN1P7-201ENST00000491722 313 ntBASIC1.38□□□□□ -2.19
SHC1P29353 RNA5SP437-201ENST00000517249 129 ntBASIC1.38□□□□□ -2.19
SHC1P29353 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.38□□□□□ -2.19
SHC1P29353 AP000942.3-201ENST00000603702 160 ntBASIC1.38□□□□□ -2.19
SHC1P29353 AL365434.2-201ENST00000607979 234 ntBASIC1.38□□□□□ -2.19
SHC1P29353 uc_338.4-201ENST00000616635 176 ntBASIC1.38□□□□□ -2.19
SHC1P29353 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SHC1P29353 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SHC1P29353 MIR126-201ENST00000362291 85 ntBASIC1.37□□□□□ -2.19
SHC1P29353 RNU6-661P-201ENST00000362409 107 ntBASIC1.37□□□□□ -2.19
SHC1P29353 Y_RNA.23-201ENST00000362496 106 ntBASIC1.37□□□□□ -2.19
SHC1P29353 MIR522-201ENST00000385071 87 ntBASIC1.37□□□□□ -2.19
SHC1P29353 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SHC1P29353 SNORA67.5-201ENST00000391036 107 ntBASIC1.37□□□□□ -2.19
SHC1P29353 MIR934-201ENST00000401241 83 ntBASIC1.37□□□□□ -2.19
SHC1P29353 RNA5SP100-201ENST00000410903 110 ntBASIC1.37□□□□□ -2.19
SHC1P29353 RNA5SP59-201ENST00000410922 110 ntBASIC1.37□□□□□ -2.19
SHC1P29353 MLLT10P1-201ENST00000418346 262 ntBASIC1.37□□□□□ -2.19
SHC1P29353 SUMO1P3-201ENST00000439961 304 ntBASIC1.37□□□□□ -2.19
SHC1P29353 AL121914.1-201ENST00000450188 156 ntBASIC1.37□□□□□ -2.19
SHC1P29353 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.37□□□□□ -2.19
SHC1P29353 MTND5P41-201ENST00000517498 206 ntBASIC1.37□□□□□ -2.19
SHC1P29353 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.37□□□□□ -2.19
SHC1P29353 AP002004.2-201ENST00000531656 154 ntBASIC1.37□□□□□ -2.19
SHC1P29353 MIR2681-201ENST00000581814 105 ntBASIC1.37□□□□□ -2.19
SHC1P29353 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.37□□□□□ -2.19
SHC1P29353 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.37□□□□□ -2.19
SHC1P29353 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.37□□□□□ -2.19
SHC1P29353 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.37□□□□□ -2.19
SHC1P29353 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SHC1P29353 Y_RNA.8-201ENST00000362353 102 ntBASIC1.36□□□□□ -2.19
SHC1P29353 RNU6-60P-201ENST00000364792 103 ntBASIC1.36□□□□□ -2.19
SHC1P29353 RNU6-484P-201ENST00000384016 107 ntBASIC1.36□□□□□ -2.19
SHC1P29353 MIR562-201ENST00000384894 95 ntBASIC1.36□□□□□ -2.19
SHC1P29353 RNU11-5P-201ENST00000391216 129 ntBASIC1.36□□□□□ -2.19
SHC1P29353 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.36□□□□□ -2.19
SHC1P29353 AC108667.1-201ENST00000428618 249 ntBASIC1.36□□□□□ -2.19
SHC1P29353 AL603825.1-201ENST00000438481 80 ntBASIC1.36□□□□□ -2.19
SHC1P29353 OR9P1P-201ENST00000496431 281 ntBASIC1.36□□□□□ -2.19
SHC1P29353 RNU2-56P-201ENST00000516826 190 ntBASIC1.36□□□□□ -2.19
SHC1P29353 RNU6-1212P-201ENST00000517023 104 ntBASIC1.36□□□□□ -2.19
SHC1P29353 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.36□□□□□ -2.19
SHC1P29353 SNORD53B-201ENST00000577887 78 ntBASIC1.36□□□□□ -2.19
SHC1P29353 MIR3144-201ENST00000579460 79 ntBASIC1.36□□□□□ -2.19
SHC1P29353 MIR4431-201ENST00000579990 94 ntBASIC1.36□□□□□ -2.19
SHC1P29353 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SHC1P29353 WWP1P1-201ENST00000466609 2769 ntBASIC1.35□□□□□ -2.19
SHC1P29353 ICE2P2-201ENST00000483823 2787 ntBASIC1.35□□□□□ -2.19
SHC1P29353 SNORD68-201ENST00000363214 84 ntBASIC1.35□□□□□ -2.19
SHC1P29353 RNU6-774P-201ENST00000363238 107 ntBASIC1.35□□□□□ -2.19
SHC1P29353 Y_RNA.170-201ENST00000363746 110 ntBASIC1.35□□□□□ -2.19
SHC1P29353 SNORD45.3-201ENST00000363836 72 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms