Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC037487.3-201ENST00000606668 112 ntBASIC0.66□□□□□ -2.3
COL8A2P25067 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
COL8A2P25067 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
COL8A2P25067 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 Y_RNA.105-201ENST00000363182 111 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 RNU6-770P-201ENST00000363929 105 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 Y_RNA.203-201ENST00000364106 102 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 RNY1-201ENST00000364228 113 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 snoU2-30.1-201ENST00000365012 70 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 RNU6-290P-201ENST00000365212 101 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 SNORA33.2-201ENST00000365413 134 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 RNU6-1227P-201ENST00000383981 107 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 RNU6-639P-201ENST00000384074 107 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 SNORA72.4-201ENST00000384174 132 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 SNORD41-201ENST00000386967 70 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 RNU6-121P-201ENST00000410525 99 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 AC004941.2-201ENST00000427009 228 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.65□□□□□ -2.31
COL8A2P25067 MTCYBP6-201ENST00000441810 138 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 HMGN2P32-201ENST00000444648 269 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 MTND4LP30-201ENST00000454092 297 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 RPL39P39-201ENST00000455840 151 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 RNU6-1143P-201ENST00000516125 104 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 RNU6-191P-201ENST00000516295 94 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 RNY3P15-201ENST00000516297 97 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 SNORD45.4-201ENST00000516629 73 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 RNU6-165P-201ENST00000517170 99 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 MIR5000-201ENST00000577717 103 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 JPX_2.1-201ENST00000614161 69 ntBASIC0.65□□□□□ -2.31
COL8A2P25067 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
COL8A2P25067 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
COL8A2P25067 Y_RNA.19-201ENST00000362462 99 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 Y_RNA.214-201ENST00000364201 112 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 Y_RNA.336-201ENST00000365307 109 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 RNU6-514P-201ENST00000384208 107 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 Y_RNA.466-201ENST00000384294 113 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 MIR526A1-201ENST00000384897 85 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 MIR15B-201ENST00000385045 98 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 MIR146A-201ENST00000385201 99 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 MIR613-201ENST00000385248 95 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 SNORA53-201ENST00000391141 249 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 SNORA36B-201ENST00000410438 131 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 ELOCP20-201ENST00000422460 345 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 MTCO1P5-201ENST00000433573 344 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 LINC01399-202ENST00000458450 244 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 RNU7-141P-201ENST00000459304 62 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 RNU6-437P-201ENST00000459408 95 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 RNU6-947P-201ENST00000516264 106 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 RNU6-764P-201ENST00000516396 105 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 SNORA70.22-201ENST00000517160 124 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 MIR2681-201ENST00000581814 105 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 AC087685.1-201ENST00000587507 141 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 AL512605.2-201ENST00000592972 256 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 AC007742.2-201ENST00000618226 398 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.64□□□□□ -2.31
COL8A2P25067 MIR6866-201ENST00000638146 69 ntBASIC0.64□□□□□ -2.31
COL8A2P25067 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
COL8A2P25067 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.63□□□□□ -2.31
COL8A2P25067 SNORA25.1-201ENST00000362326 128 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 Y_RNA.153-201ENST00000363615 91 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 RNU1-124P-201ENST00000363861 145 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 RNU6-899P-201ENST00000363947 107 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 SNORD14E-201ENST00000364009 85 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 RNU6-1048P-201ENST00000364054 107 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 RNU6-801P-201ENST00000364087 105 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 RNU6-969P-201ENST00000383900 105 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 MIR802-201ENST00000390235 94 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 SNORA26.5-201ENST00000391215 123 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 MTCO2P33-201ENST00000402100 465 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 MIR1298-201ENST00000408783 112 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 RNU6-985P-201ENST00000410182 104 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 RNU2-14P-201ENST00000411053 191 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 RPL21P38-201ENST00000418090 167 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.63□□□□□ -2.31
COL8A2P25067 MRPS35P2-201ENST00000508242 191 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 SNORD116-28-201ENST00000516123 91 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 SNORD111.1-201ENST00000516421 86 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 RNU6-1153P-201ENST00000516760 105 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 RNU2-31P-201ENST00000516954 155 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.63□□□□□ -2.31
COL8A2P25067 MIR4714-201ENST00000580728 77 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 AC005357.1-201ENST00000588399 301 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 AC108706.1-201ENST00000611053 297 ntBASIC0.63□□□□□ -2.31
COL8A2P25067 AC134026.1-201ENST00000623249 2239 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 snoU2_19.2-201ENST00000363024 80 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 RNU6-1209P-201ENST00000363655 107 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 RNU6-674P-201ENST00000363831 107 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 SNORD50B-201ENST00000364995 70 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 RNU6-326P-201ENST00000365480 107 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 Y_RNA.422-201ENST00000384054 114 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 Y_RNA.541-201ENST00000384640 113 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 MIR516B2-201ENST00000385190 85 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 MIR136-201ENST00000385207 82 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 AL731563.1-201ENST00000442202 214 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 AC098869.1-201ENST00000481627 292 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.62□□□□□ -2.31
COL8A2P25067 SNORA31.2-201ENST00000516019 134 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 SNORA31.4-201ENST00000516049 129 ntBASIC0.62□□□□□ -2.31
COL8A2P25067 RNU6-1007P-201ENST00000516586 107 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms