Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 U6.73-201ENST00000619194 103 ntBASIC2.21□□□□□ -2.05
POLR2AP24928 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
POLR2AP24928 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
POLR2AP24928 Y_RNA.253-201ENST00000364562 112 ntBASIC2.21□□□□□ -2.06
POLR2AP24928 RNU6-915P-201ENST00000364943 103 ntBASIC2.21□□□□□ -2.06
POLR2AP24928 Y_RNA.355-201ENST00000365462 98 ntBASIC2.21□□□□□ -2.06
POLR2AP24928 RNU6-220P-201ENST00000390919 107 ntBASIC2.21□□□□□ -2.06
POLR2AP24928 AC019129.1-201ENST00000403786 261 ntBASIC2.21□□□□□ -2.06
POLR2AP24928 Y_RNA.622-201ENST00000411091 108 ntBASIC2.21□□□□□ -2.06
POLR2AP24928 AC016909.1-201ENST00000415916 166 ntBASIC2.21□□□□□ -2.06
POLR2AP24928 AC099677.2-201ENST00000436385 175 ntBASIC2.21□□□□□ -2.06
POLR2AP24928 OR9P1P-201ENST00000496431 281 ntBASIC2.21□□□□□ -2.06
POLR2AP24928 Y_RNA.35-201ENST00000362601 101 ntBASIC2.2□□□□□ -2.06
POLR2AP24928 RNU6-235P-201ENST00000362644 107 ntBASIC2.2□□□□□ -2.06
POLR2AP24928 Y_RNA.348-201ENST00000365403 103 ntBASIC2.2□□□□□ -2.06
POLR2AP24928 MIR891A-201ENST00000401237 79 ntBASIC2.2□□□□□ -2.06
POLR2AP24928 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.2□□□□□ -2.06
POLR2AP24928 SNRPGP13-201ENST00000442212 177 ntBASIC2.2□□□□□ -2.06
POLR2AP24928 RPS29P12-201ENST00000460178 152 ntBASIC2.2□□□□□ -2.06
POLR2AP24928 TRMT112P2-201ENST00000512910 132 ntBASIC2.2□□□□□ -2.06
POLR2AP24928 SNORA25.15-201ENST00000516487 89 ntBASIC2.2□□□□□ -2.06
POLR2AP24928 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
POLR2AP24928 MTND5P32-201ENST00000560711 1802 ntBASIC2.2□□□□□ -2.06
POLR2AP24928 MIR337-201ENST00000362281 93 ntBASIC2.19□□□□□ -2.06
POLR2AP24928 Y_RNA.52-201ENST00000362760 96 ntBASIC2.19□□□□□ -2.06
POLR2AP24928 Y_RNA.281-201ENST00000364774 94 ntBASIC2.19□□□□□ -2.06
POLR2AP24928 MIR7-2-201ENST00000384970 110 ntBASIC2.19□□□□□ -2.06
POLR2AP24928 SNORD37.2-201ENST00000391075 66 ntBASIC2.19□□□□□ -2.06
POLR2AP24928 RNU2-70P-201ENST00000410718 179 ntBASIC2.19□□□□□ -2.06
POLR2AP24928 RNU6-250P-201ENST00000516958 103 ntBASIC2.19□□□□□ -2.06
POLR2AP24928 RNA5SP490-201ENST00000517141 136 ntBASIC2.19□□□□□ -2.06
POLR2AP24928 MIR4762-201ENST00000585261 75 ntBASIC2.19□□□□□ -2.06
POLR2AP24928 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
POLR2AP24928 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.19□□□□□ -2.06
POLR2AP24928 HMGN1P7-201ENST00000491722 313 ntBASIC2.19□□□□□ -2.06
POLR2AP24928 RNA5SP402-201ENST00000517148 110 ntBASIC2.19□□□□□ -2.06
POLR2AP24928 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.19□□□□□ -2.06
POLR2AP24928 RNU6-1274P-201ENST00000384557 107 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 RPS26P48-201ENST00000491713 339 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.18□□□□□ -2.06
POLR2AP24928 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.18□□□□□ -2.06
POLR2AP24928 AC006441.5-201ENST00000612680 209 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
POLR2AP24928 CD24P4-201ENST00000382840 243 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 RNY4P18-201ENST00000391107 89 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 RNA5SP89-201ENST00000410300 108 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 HMGN2P18-201ENST00000450680 270 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 AC079804.2-201ENST00000490376 200 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 SEM1P1-201ENST00000506694 209 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 AC023141.11-201ENST00000508864 202 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 MRPS17P9-201ENST00000511924 393 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 RNU5E-3P-201ENST00000515913 68 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 RNU6-1061P-201ENST00000516530 99 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 RNU6-56P-201ENST00000516986 93 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 Y_RNA.712-201ENST00000517011 92 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 MIR3670-2-201ENST00000582974 65 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 MIR3670-1-201ENST00000584160 65 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 MIR3670-3-201ENST00000584855 65 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 MIR3670-4-201ENST00000612260 65 ntBASIC2.18□□□□□ -2.06
POLR2AP24928 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
POLR2AP24928 RNU6-429P-201ENST00000384582 108 ntBASIC2.17□□□□□ -2.06
POLR2AP24928 RNY4P30-201ENST00000410216 95 ntBASIC2.17□□□□□ -2.06
POLR2AP24928 RNA5SP344-201ENST00000411081 104 ntBASIC2.17□□□□□ -2.06
POLR2AP24928 AC008134.1-201ENST00000420943 193 ntBASIC2.17□□□□□ -2.06
POLR2AP24928 AL163195.1-201ENST00000496941 348 ntBASIC2.17□□□□□ -2.06
POLR2AP24928 RNU1-142P-201ENST00000516682 145 ntBASIC2.17□□□□□ -2.06
POLR2AP24928 MIR5089-201ENST00000580047 84 ntBASIC2.17□□□□□ -2.06
POLR2AP24928 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
POLR2AP24928 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.17□□□□□ -2.06
POLR2AP24928 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.17□□□□□ -2.06
POLR2AP24928 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
POLR2AP24928 SNORD68-201ENST00000363214 84 ntBASIC2.16□□□□□ -2.06
POLR2AP24928 RNU2-63P-201ENST00000410792 194 ntBASIC2.16□□□□□ -2.06
POLR2AP24928 AC002984.1-201ENST00000591692 448 ntBASIC2.16□□□□□ -2.06
POLR2AP24928 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
POLR2AP24928 RNA5SP160-201ENST00000364866 120 ntBASIC2.16□□□□□ -2.06
POLR2AP24928 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
POLR2AP24928 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.16□□□□□ -2.06
POLR2AP24928 AC123900.1-201ENST00000420390 96 ntBASIC2.16□□□□□ -2.06
POLR2AP24928 RNU7-99P-201ENST00000516271 62 ntBASIC2.16□□□□□ -2.06
POLR2AP24928 RNU6-504P-201ENST00000516568 104 ntBASIC2.16□□□□□ -2.06
POLR2AP24928 RNU6-341P-201ENST00000516973 96 ntBASIC2.16□□□□□ -2.06
POLR2AP24928 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
POLR2AP24928 AC021443.1-201ENST00000604478 211 ntBASIC2.16□□□□□ -2.06
POLR2AP24928 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
POLR2AP24928 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
POLR2AP24928 RNU1-58P-201ENST00000362413 163 ntBASIC2.15□□□□□ -2.07
POLR2AP24928 Y_RNA.191-201ENST00000363972 113 ntBASIC2.15□□□□□ -2.07
POLR2AP24928 SNORD58C-201ENST00000365223 64 ntBASIC2.15□□□□□ -2.07
POLR2AP24928 SNORD38C-201ENST00000384381 69 ntBASIC2.15□□□□□ -2.07
POLR2AP24928 AL117342.1-201ENST00000404861 406 ntBASIC2.15□□□□□ -2.07
POLR2AP24928 MIR548O-201ENST00000408583 114 ntBASIC2.15□□□□□ -2.07
POLR2AP24928 MIR1276-201ENST00000408707 83 ntBASIC2.15□□□□□ -2.07
POLR2AP24928 RNU6-1299P-201ENST00000516316 100 ntBASIC2.15□□□□□ -2.07
POLR2AP24928 RNU6-1270P-201ENST00000517128 108 ntBASIC2.15□□□□□ -2.07
POLR2AP24928 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.15□□□□□ -2.07
POLR2AP24928 AL137067.1-201ENST00000615933 120 ntBASIC2.15□□□□□ -2.07
POLR2AP24928 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.15□□□□□ -2.07
POLR2AP24928 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms