Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNY3P5-201ENST00000384127 102 ntBASIC1.63□□□□□ -2.15
TNFSF4P23510 MIR516B2-201ENST00000385190 85 ntBASIC1.63□□□□□ -2.15
TNFSF4P23510 SNORD41-201ENST00000386967 70 ntBASIC1.63□□□□□ -2.15
TNFSF4P23510 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
TNFSF4P23510 SNORD72-201ENST00000390994 80 ntBASIC1.63□□□□□ -2.15
TNFSF4P23510 SNRPGP14-201ENST00000435400 219 ntBASIC1.63□□□□□ -2.15
TNFSF4P23510 COX6CP14-201ENST00000469580 174 ntBASIC1.63□□□□□ -2.15
TNFSF4P23510 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.63□□□□□ -2.15
TNFSF4P23510 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
TNFSF4P23510 MIR5089-201ENST00000580047 84 ntBASIC1.63□□□□□ -2.15
TNFSF4P23510 AP001485.1-201ENST00000604799 199 ntBASIC1.63□□□□□ -2.15
TNFSF4P23510 AL391903.3-201ENST00000612158 163 ntBASIC1.63□□□□□ -2.15
TNFSF4P23510 AC006441.5-201ENST00000612680 209 ntBASIC1.63□□□□□ -2.15
TNFSF4P23510 AL442644.1-201ENST00000454390 3105 ntBASIC1.62□□□□□ -2.15
TNFSF4P23510 RNU6-653P-201ENST00000363074 106 ntBASIC1.62□□□□□ -2.15
TNFSF4P23510 RNU6-268P-201ENST00000364174 107 ntBASIC1.62□□□□□ -2.15
TNFSF4P23510 Y_RNA.489-201ENST00000384410 101 ntBASIC1.62□□□□□ -2.15
TNFSF4P23510 Y_RNA.539-201ENST00000384635 107 ntBASIC1.62□□□□□ -2.15
TNFSF4P23510 MIR616-201ENST00000385293 97 ntBASIC1.62□□□□□ -2.15
TNFSF4P23510 Y_RNA.587-201ENST00000391210 103 ntBASIC1.62□□□□□ -2.15
TNFSF4P23510 SUMO2P12-201ENST00000405924 140 ntBASIC1.62□□□□□ -2.15
TNFSF4P23510 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.62□□□□□ -2.15
TNFSF4P23510 AC245047.8-201ENST00000456455 284 ntBASIC1.62□□□□□ -2.15
TNFSF4P23510 snoU13.15-201ENST00000459407 104 ntBASIC1.62□□□□□ -2.15
TNFSF4P23510 RNU6-970P-201ENST00000516312 107 ntBASIC1.62□□□□□ -2.15
TNFSF4P23510 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.62□□□□□ -2.15
TNFSF4P23510 SNRPGP19-201ENST00000603826 189 ntBASIC1.62□□□□□ -2.15
TNFSF4P23510 AC011921.3-201ENST00000605540 361 ntBASIC1.62□□□□□ -2.15
TNFSF4P23510 Y_RNA.269-201ENST00000364685 89 ntBASIC1.61□□□□□ -2.15
TNFSF4P23510 RNY4P28-201ENST00000365281 93 ntBASIC1.61□□□□□ -2.15
TNFSF4P23510 RNU2-2P-201ENST00000410396 191 ntBASIC1.61□□□□□ -2.15
TNFSF4P23510 UBL5P3-201ENST00000475112 231 ntBASIC1.61□□□□□ -2.15
TNFSF4P23510 RN7SKP164-201ENST00000516138 266 ntBASIC1.61□□□□□ -2.15
TNFSF4P23510 RNU6-830P-201ENST00000516353 107 ntBASIC1.61□□□□□ -2.15
TNFSF4P23510 Y_RNA.680-201ENST00000516441 93 ntBASIC1.61□□□□□ -2.15
TNFSF4P23510 RN7SKP88-201ENST00000516847 250 ntBASIC1.61□□□□□ -2.15
TNFSF4P23510 7SK.8-201ENST00000612110 250 ntBASIC1.61□□□□□ -2.15
TNFSF4P23510 7SK.11-201ENST00000615477 250 ntBASIC1.61□□□□□ -2.15
TNFSF4P23510 Pinc.1-201ENST00000616452 154 ntBASIC1.61□□□□□ -2.15
TNFSF4P23510 7SK.13-201ENST00000622040 250 ntBASIC1.61□□□□□ -2.15
TNFSF4P23510 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
TNFSF4P23510 Y_RNA.572-201ENST00000384757 98 ntBASIC1.6□□□□□ -2.15
TNFSF4P23510 RNU6-381P-201ENST00000391259 108 ntBASIC1.6□□□□□ -2.15
TNFSF4P23510 RNU2-55P-201ENST00000411146 174 ntBASIC1.6□□□□□ -2.15
TNFSF4P23510 RPL39P39-201ENST00000455840 151 ntBASIC1.6□□□□□ -2.15
TNFSF4P23510 AC107393.1-201ENST00000512403 346 ntBASIC1.6□□□□□ -2.15
TNFSF4P23510 MIR4298-201ENST00000584380 73 ntBASIC1.6□□□□□ -2.15
TNFSF4P23510 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TNFSF4P23510 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.59□□□□□ -2.15
TNFSF4P23510 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TNFSF4P23510 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.59□□□□□ -2.15
TNFSF4P23510 RNU6-1228P-201ENST00000391014 107 ntBASIC1.59□□□□□ -2.15
TNFSF4P23510 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.59□□□□□ -2.15
TNFSF4P23510 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.59□□□□□ -2.15
TNFSF4P23510 SNORA74.3-201ENST00000517108 154 ntBASIC1.59□□□□□ -2.15
TNFSF4P23510 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.59□□□□□ -2.15
TNFSF4P23510 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TNFSF4P23510 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.58□□□□□ -2.16
TNFSF4P23510 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
TNFSF4P23510 RNU6-103P-201ENST00000363686 107 ntBASIC1.58□□□□□ -2.16
TNFSF4P23510 Y_RNA.188-201ENST00000363952 111 ntBASIC1.58□□□□□ -2.16
TNFSF4P23510 RNY1-201ENST00000364228 113 ntBASIC1.58□□□□□ -2.16
TNFSF4P23510 MT-TG-201ENST00000387429 68 ntBASIC1.58□□□□□ -2.16
TNFSF4P23510 SNORA26-201ENST00000391286 122 ntBASIC1.58□□□□□ -2.16
TNFSF4P23510 SNORD111.1-201ENST00000516421 86 ntBASIC1.58□□□□□ -2.16
TNFSF4P23510 RNU6-111P-201ENST00000517179 105 ntBASIC1.58□□□□□ -2.16
TNFSF4P23510 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
TNFSF4P23510 AC110588.1-201ENST00000559699 137 ntBASIC1.58□□□□□ -2.16
TNFSF4P23510 CYP3A52P-201ENST00000563326 91 ntBASIC1.58□□□□□ -2.16
TNFSF4P23510 MIR8065-201ENST00000620577 100 ntBASIC1.58□□□□□ -2.16
TNFSF4P23510 snoU2_19.4-201ENST00000364329 80 ntBASIC1.57□□□□□ -2.16
TNFSF4P23510 SNORA16.1-201ENST00000364597 132 ntBASIC1.57□□□□□ -2.16
TNFSF4P23510 MIR504-201ENST00000385065 83 ntBASIC1.57□□□□□ -2.16
TNFSF4P23510 SNORA40.18-201ENST00000391200 128 ntBASIC1.57□□□□□ -2.16
TNFSF4P23510 RNU7-43P-201ENST00000516554 64 ntBASIC1.57□□□□□ -2.16
TNFSF4P23510 RNU6-295P-201ENST00000516901 104 ntBASIC1.57□□□□□ -2.16
TNFSF4P23510 RNU6-165P-201ENST00000517170 99 ntBASIC1.57□□□□□ -2.16
TNFSF4P23510 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TNFSF4P23510 AL606845.1-201ENST00000404881 255 ntBASIC1.56□□□□□ -2.16
TNFSF4P23510 Y_RNA.626-201ENST00000411288 95 ntBASIC1.56□□□□□ -2.16
TNFSF4P23510 SNORD123-201ENST00000459473 70 ntBASIC1.56□□□□□ -2.16
TNFSF4P23510 RNU6-1299P-201ENST00000516316 100 ntBASIC1.56□□□□□ -2.16
TNFSF4P23510 SNORA18.7-201ENST00000516910 131 ntBASIC1.56□□□□□ -2.16
TNFSF4P23510 RNU6-365P-201ENST00000517113 106 ntBASIC1.56□□□□□ -2.16
TNFSF4P23510 AC015726.2-201ENST00000620112 122 ntBASIC1.56□□□□□ -2.16
TNFSF4P23510 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TNFSF4P23510 RNU6-947P-201ENST00000516264 106 ntBASIC1.55□□□□□ -2.16
TNFSF4P23510 RNU6-1271P-201ENST00000517049 105 ntBASIC1.55□□□□□ -2.16
TNFSF4P23510 MIR3618-201ENST00000580330 88 ntBASIC1.55□□□□□ -2.16
TNFSF4P23510 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TNFSF4P23510 Y_RNA.308-201ENST00000365043 101 ntBASIC1.54□□□□□ -2.16
TNFSF4P23510 Y_RNA.432-201ENST00000384087 111 ntBASIC1.54□□□□□ -2.16
TNFSF4P23510 Y_RNA.486-201ENST00000384398 107 ntBASIC1.54□□□□□ -2.16
TNFSF4P23510 MIR520C-201ENST00000385005 87 ntBASIC1.54□□□□□ -2.16
TNFSF4P23510 MT-TT-201ENST00000387460 66 ntBASIC1.54□□□□□ -2.16
TNFSF4P23510 U8.13-201ENST00000390842 128 ntBASIC1.54□□□□□ -2.16
TNFSF4P23510 MIR548O-201ENST00000408583 114 ntBASIC1.54□□□□□ -2.16
TNFSF4P23510 SNRPGP13-201ENST00000442212 177 ntBASIC1.54□□□□□ -2.16
TNFSF4P23510 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.54□□□□□ -2.16
TNFSF4P23510 SCARNA8-201ENST00000515924 131 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms