Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 SNORA11.4-201ENST00000408823 129 ntBASIC2.18□□□□□ -2.06
NR4A1P22736 AC063976.4-201ENST00000421971 163 ntBASIC2.18□□□□□ -2.06
NR4A1P22736 RNU6-781P-201ENST00000516377 101 ntBASIC2.18□□□□□ -2.06
NR4A1P22736 RNU7-28P-201ENST00000516759 62 ntBASIC2.18□□□□□ -2.06
NR4A1P22736 MIR3169-201ENST00000578032 83 ntBASIC2.18□□□□□ -2.06
NR4A1P22736 AC022217.4-201ENST00000604389 163 ntBASIC2.18□□□□□ -2.06
NR4A1P22736 AC025166.1-201ENST00000612411 163 ntBASIC2.18□□□□□ -2.06
NR4A1P22736 AC006441.5-201ENST00000612680 209 ntBASIC2.18□□□□□ -2.06
NR4A1P22736 AL121890.5-201ENST00000620848 304 ntBASIC2.18□□□□□ -2.06
NR4A1P22736 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.18□□□□□ -2.06
NR4A1P22736 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.18□□□□□ -2.06
NR4A1P22736 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NR4A1P22736 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NR4A1P22736 SNORD68-201ENST00000363214 84 ntBASIC2.17□□□□□ -2.06
NR4A1P22736 RNU6-23P-201ENST00000363283 107 ntBASIC2.17□□□□□ -2.06
NR4A1P22736 SNORD14E-201ENST00000364009 85 ntBASIC2.17□□□□□ -2.06
NR4A1P22736 SNORA22-201ENST00000383907 134 ntBASIC2.17□□□□□ -2.06
NR4A1P22736 Y_RNA.410-201ENST00000383992 113 ntBASIC2.17□□□□□ -2.06
NR4A1P22736 MIR518F-201ENST00000384973 87 ntBASIC2.17□□□□□ -2.06
NR4A1P22736 MIR29C-201ENST00000385231 88 ntBASIC2.17□□□□□ -2.06
NR4A1P22736 AC092427.1-202ENST00000430569 476 ntBASIC2.17□□□□□ -2.06
NR4A1P22736 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.17□□□□□ -2.06
NR4A1P22736 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.17□□□□□ -2.06
NR4A1P22736 RNA5SP320-201ENST00000516263 124 ntBASIC2.17□□□□□ -2.06
NR4A1P22736 MIR5197-201ENST00000583721 112 ntBASIC2.17□□□□□ -2.06
NR4A1P22736 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.17□□□□□ -2.06
NR4A1P22736 AC134878.1-201ENST00000619901 243 ntBASIC2.17□□□□□ -2.06
NR4A1P22736 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.17□□□□□ -2.06
NR4A1P22736 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
NR4A1P22736 RNU6-1084P-201ENST00000362498 107 ntBASIC2.16□□□□□ -2.06
NR4A1P22736 RNU6-1164P-201ENST00000364428 107 ntBASIC2.16□□□□□ -2.06
NR4A1P22736 snoU2-30.1-201ENST00000365012 70 ntBASIC2.16□□□□□ -2.06
NR4A1P22736 AC007064.1-201ENST00000412238 351 ntBASIC2.16□□□□□ -2.06
NR4A1P22736 HMGN2P38-201ENST00000423806 265 ntBASIC2.16□□□□□ -2.06
NR4A1P22736 AC104389.3-201ENST00000445629 235 ntBASIC2.16□□□□□ -2.06
NR4A1P22736 RNU6-1149P-201ENST00000516810 97 ntBASIC2.16□□□□□ -2.06
NR4A1P22736 SCARNA15-202ENST00000516881 127 ntBASIC2.16□□□□□ -2.06
NR4A1P22736 MIR4513-201ENST00000581077 86 ntBASIC2.16□□□□□ -2.06
NR4A1P22736 AC005786.1-201ENST00000588553 154 ntBASIC2.16□□□□□ -2.06
NR4A1P22736 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
NR4A1P22736 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
NR4A1P22736 MIR449A-201ENST00000362113 91 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 RNA5SP456-201ENST00000364002 114 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 Y_RNA.336-201ENST00000365307 109 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 RNU6-301P-201ENST00000384277 107 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 RNU6-880P-201ENST00000384526 107 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 MIR548O-201ENST00000408583 114 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 RNA5SP136-201ENST00000410906 107 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 AC245047.3-201ENST00000429428 127 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 AC099677.2-201ENST00000436385 175 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 Y_RNA.649-201ENST00000459077 103 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 TRBV12-1-201ENST00000479785 344 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 AC090255.1-201ENST00000495779 349 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.15□□□□□ -2.07
NR4A1P22736 MIR5694-201ENST00000581190 76 ntBASIC2.15□□□□□ -2.07
NR4A1P22736 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
NR4A1P22736 MTND5P18-201ENST00000445624 1801 ntBASIC2.14□□□□□ -2.07
NR4A1P22736 SNORD114-30-201ENST00000364448 72 ntBASIC2.14□□□□□ -2.07
NR4A1P22736 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.14□□□□□ -2.07
NR4A1P22736 HMGN2P32-201ENST00000444648 269 ntBASIC2.14□□□□□ -2.07
NR4A1P22736 AC104435.1-201ENST00000483483 166 ntBASIC2.14□□□□□ -2.07
NR4A1P22736 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
NR4A1P22736 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.14□□□□□ -2.07
NR4A1P22736 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.13□□□□□ -2.07
NR4A1P22736 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NR4A1P22736 RNU1-58P-201ENST00000362413 163 ntBASIC2.13□□□□□ -2.07
NR4A1P22736 RNU4-82P-201ENST00000362443 140 ntBASIC2.13□□□□□ -2.07
NR4A1P22736 Y_RNA.35-201ENST00000362601 101 ntBASIC2.13□□□□□ -2.07
NR4A1P22736 SNORD115-28-201ENST00000363931 81 ntBASIC2.13□□□□□ -2.07
NR4A1P22736 RNU6-268P-201ENST00000364174 107 ntBASIC2.13□□□□□ -2.07
NR4A1P22736 RNU6-1189P-201ENST00000383958 107 ntBASIC2.13□□□□□ -2.07
NR4A1P22736 AL359511.1-201ENST00000402970 211 ntBASIC2.13□□□□□ -2.07
NR4A1P22736 SNRPGP14-201ENST00000435400 219 ntBASIC2.13□□□□□ -2.07
NR4A1P22736 SNORD45.4-201ENST00000516629 73 ntBASIC2.13□□□□□ -2.07
NR4A1P22736 IGKV1-22-201ENST00000524313 326 ntBASIC2.13□□□□□ -2.07
NR4A1P22736 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.13□□□□□ -2.07
NR4A1P22736 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.13□□□□□ -2.07
NR4A1P22736 AC245060.5-201ENST00000610778 3293 ntBASIC2.12□□□□□ -2.07
NR4A1P22736 Y_RNA.265-201ENST00000364677 108 ntBASIC2.12□□□□□ -2.07
NR4A1P22736 MIR1263-201ENST00000408324 86 ntBASIC2.12□□□□□ -2.07
NR4A1P22736 RNA5SP338-201ENST00000410495 85 ntBASIC2.12□□□□□ -2.07
NR4A1P22736 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.12□□□□□ -2.07
NR4A1P22736 AC069257.2-201ENST00000441819 155 ntBASIC2.12□□□□□ -2.07
NR4A1P22736 RPS26P48-201ENST00000491713 339 ntBASIC2.12□□□□□ -2.07
NR4A1P22736 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.12□□□□□ -2.07
NR4A1P22736 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.12□□□□□ -2.07
NR4A1P22736 AC069114.2-201ENST00000604699 304 ntBASIC2.12□□□□□ -2.07
NR4A1P22736 SNORA28-201ENST00000606769 126 ntBASIC2.12□□□□□ -2.07
NR4A1P22736 AL137067.1-201ENST00000615933 120 ntBASIC2.12□□□□□ -2.07
NR4A1P22736 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NR4A1P22736 RNU6-1019P-201ENST00000364424 107 ntBASIC2.11□□□□□ -2.07
NR4A1P22736 Y_RNA.528-201ENST00000384575 108 ntBASIC2.11□□□□□ -2.07
NR4A1P22736 SNORA67.4-201ENST00000384688 142 ntBASIC2.11□□□□□ -2.07
NR4A1P22736 MIR548A1-201ENST00000385041 97 ntBASIC2.11□□□□□ -2.07
NR4A1P22736 RNU7-26P-201ENST00000458980 63 ntBASIC2.11□□□□□ -2.07
NR4A1P22736 COX6CP6-201ENST00000490840 228 ntBASIC2.11□□□□□ -2.07
NR4A1P22736 RPL23AP94-201ENST00000512518 302 ntBASIC2.11□□□□□ -2.07
NR4A1P22736 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.11□□□□□ -2.07
NR4A1P22736 RNU6-412P-201ENST00000516434 106 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms