Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 Y_RNA.467-201ENST00000384297 102 ntBASIC2.97□□□□□ -1.93
NID1P14543 MIR592-201ENST00000384959 97 ntBASIC2.97□□□□□ -1.93
NID1P14543 SRIP3-201ENST00000413200 219 ntBASIC2.97□□□□□ -1.93
NID1P14543 RPL32P35-201ENST00000415214 394 ntBASIC2.97□□□□□ -1.93
NID1P14543 POLR2J4-204ENST00000418424 324 ntBASIC2.97□□□□□ -1.93
NID1P14543 RNU7-113P-201ENST00000459273 62 ntBASIC2.97□□□□□ -1.93
NID1P14543 RN7SL297P-201ENST00000483161 293 ntBASIC2.97□□□□□ -1.93
NID1P14543 AC006483.1-201ENST00000487308 313 ntBASIC2.97□□□□□ -1.93
NID1P14543 RNU6-667P-201ENST00000517186 102 ntBASIC2.97□□□□□ -1.93
NID1P14543 AC090821.2-201ENST00000523552 176 ntBASIC2.97□□□□□ -1.93
NID1P14543 MIR4668-201ENST00000582284 70 ntBASIC2.97□□□□□ -1.93
NID1P14543 ZNF861P-201ENST00000588126 639 ntBASIC2.97□□□□□ -1.93
NID1P14543 AL355297.2-201ENST00000604792 129 ntBASIC2.97□□□□□ -1.93
NID1P14543 uc_338.25-201ENST00000613756 156 ntBASIC2.97□□□□□ -1.93
NID1P14543 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.97□□□□□ -1.93
NID1P14543 MIR4662A-201ENST00000637499 67 ntBASIC2.97□□□□□ -1.93
NID1P14543 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
NID1P14543 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.97□□□□□ -1.93
NID1P14543 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
NID1P14543 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
NID1P14543 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.96□□□□□ -1.94
NID1P14543 MIR561-201ENST00000385216 97 ntBASIC2.96□□□□□ -1.94
NID1P14543 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
NID1P14543 Y_RNA.620-201ENST00000411009 88 ntBASIC2.96□□□□□ -1.94
NID1P14543 AC245047.3-201ENST00000429428 127 ntBASIC2.96□□□□□ -1.94
NID1P14543 SNORA31.4-201ENST00000516049 129 ntBASIC2.96□□□□□ -1.94
NID1P14543 EIF4BP1-201ENST00000554881 351 ntBASIC2.96□□□□□ -1.94
NID1P14543 AC096720.1-201ENST00000604441 183 ntBASIC2.96□□□□□ -1.94
NID1P14543 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.96□□□□□ -1.94
NID1P14543 AL162274.2-201ENST00000614406 332 ntBASIC2.96□□□□□ -1.94
NID1P14543 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NID1P14543 MAPK10-266ENST00000641066 6555 ntBASIC2.96□□□□□ -1.94
NID1P14543 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
NID1P14543 AC092881.1-201ENST00000638218 2733 ntBASIC2.96□□□□□ -1.94
NID1P14543 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
NID1P14543 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NID1P14543 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
NID1P14543 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NID1P14543 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.95□□□□□ -1.94
NID1P14543 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.95□□□□□ -1.94
NID1P14543 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-34-201ENST00000362441 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-12-201ENST00000362583 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-29-201ENST00000362834 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-9-201ENST00000362912 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-21-201ENST00000362963 81 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-14-201ENST00000363090 81 ntBASIC2.95□□□□□ -1.94
NID1P14543 Y_RNA.99-201ENST00000363138 105 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-41-201ENST00000363608 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-11-201ENST00000363616 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-5-201ENST00000363633 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-39-201ENST00000363694 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-4-201ENST00000363810 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-6-201ENST00000363942 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORA25.6-201ENST00000364121 118 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-42-201ENST00000364273 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-15-201ENST00000364809 81 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-26-201ENST00000365067 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-10-201ENST00000365073 81 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-43-201ENST00000365503 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 SNORD115-36-201ENST00000365629 82 ntBASIC2.95□□□□□ -1.94
NID1P14543 AC114811.1-201ENST00000507207 168 ntBASIC2.95□□□□□ -1.94
NID1P14543 MIR2682-201ENST00000580305 110 ntBASIC2.95□□□□□ -1.94
NID1P14543 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.95□□□□□ -1.94
NID1P14543 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
NID1P14543 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NID1P14543 SNORD116-10-201ENST00000363791 102 ntBASIC2.94□□□□□ -1.94
NID1P14543 SNORD114-6-201ENST00000364393 72 ntBASIC2.94□□□□□ -1.94
NID1P14543 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NID1P14543 RNU6-616P-201ENST00000384353 107 ntBASIC2.94□□□□□ -1.94
NID1P14543 RNU6-424P-201ENST00000384367 105 ntBASIC2.94□□□□□ -1.94
NID1P14543 RNU6-163P-201ENST00000384396 106 ntBASIC2.94□□□□□ -1.94
NID1P14543 RNU2-40P-201ENST00000410833 196 ntBASIC2.94□□□□□ -1.94
NID1P14543 SEM1P1-201ENST00000506694 209 ntBASIC2.94□□□□□ -1.94
NID1P14543 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.94□□□□□ -1.94
NID1P14543 MIR4439-201ENST00000583746 80 ntBASIC2.94□□□□□ -1.94
NID1P14543 AL512310.12-203ENST00000640543 90 ntBASIC2.94□□□□□ -1.94
NID1P14543 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.94□□□□□ -1.94
NID1P14543 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NID1P14543 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.94□□□□□ -1.94
NID1P14543 Y_RNA.171-201ENST00000363760 102 ntBASIC2.93□□□□□ -1.94
NID1P14543 RNU6-160P-201ENST00000384591 107 ntBASIC2.93□□□□□ -1.94
NID1P14543 RNY1P4-201ENST00000384595 115 ntBASIC2.93□□□□□ -1.94
NID1P14543 Y_RNA.611-201ENST00000410682 108 ntBASIC2.93□□□□□ -1.94
NID1P14543 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.93□□□□□ -1.94
NID1P14543 COTL1P1-201ENST00000422309 375 ntBASIC2.93□□□□□ -1.94
NID1P14543 AL135938.1-201ENST00000443141 297 ntBASIC2.93□□□□□ -1.94
NID1P14543 RPS27P29-201ENST00000463110 252 ntBASIC2.93□□□□□ -1.94
NID1P14543 AC023141.11-201ENST00000508864 202 ntBASIC2.93□□□□□ -1.94
NID1P14543 RNA5SP341-201ENST00000516261 117 ntBASIC2.93□□□□□ -1.94
NID1P14543 IGLV3-17-201ENST00000519099 244 ntBASIC2.93□□□□□ -1.94
NID1P14543 AC007536.1-201ENST00000533382 349 ntBASIC2.93□□□□□ -1.94
NID1P14543 MIR5680-201ENST00000577577 84 ntBASIC2.93□□□□□ -1.94
NID1P14543 MIR4513-201ENST00000581077 86 ntBASIC2.93□□□□□ -1.94
NID1P14543 AC096644.4-201ENST00000563417 2912 ntBASIC2.93□□□□□ -1.94
NID1P14543 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
NID1P14543 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NID1P14543 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NID1P14543 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.92□□□□□ -1.94
NID1P14543 RNU6-862P-201ENST00000362804 105 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms