Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SNORA31.10-201ENST00000516482 106 ntBASIC2.56□□□□□ -2
ITGA4P13612 SNORD45.4-201ENST00000516629 73 ntBASIC2.56□□□□□ -2
ITGA4P13612 AC090049.2-201ENST00000550377 109 ntBASIC2.56□□□□□ -2
ITGA4P13612 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
ITGA4P13612 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
ITGA4P13612 RNU6-309P-201ENST00000364573 106 ntBASIC2.55□□□□□ -2
ITGA4P13612 AL603914.1-201ENST00000401964 204 ntBASIC2.55□□□□□ -2
ITGA4P13612 MIR548O-201ENST00000408583 114 ntBASIC2.55□□□□□ -2
ITGA4P13612 RN7SKP192-201ENST00000411291 327 ntBASIC2.55□□□□□ -2
ITGA4P13612 AL356320.1-201ENST00000429616 163 ntBASIC2.55□□□□□ -2
ITGA4P13612 HSPE1P9-201ENST00000440046 311 ntBASIC2.55□□□□□ -2
ITGA4P13612 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.55□□□□□ -2
ITGA4P13612 MIR3121-201ENST00000579680 77 ntBASIC2.55□□□□□ -2
ITGA4P13612 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.55□□□□□ -2
ITGA4P13612 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.54□□□□□ -2
ITGA4P13612 Y_RNA.114-201ENST00000363265 113 ntBASIC2.54□□□□□ -2
ITGA4P13612 Y_RNA.273-201ENST00000364703 102 ntBASIC2.54□□□□□ -2
ITGA4P13612 Y_RNA.280-201ENST00000364765 112 ntBASIC2.54□□□□□ -2
ITGA4P13612 RNU6-1292P-201ENST00000383856 107 ntBASIC2.54□□□□□ -2
ITGA4P13612 SNORA80E-201ENST00000384744 137 ntBASIC2.54□□□□□ -2
ITGA4P13612 SNORD77.3-201ENST00000391113 65 ntBASIC2.54□□□□□ -2
ITGA4P13612 RN7SKP223-201ENST00000410582 62 ntBASIC2.54□□□□□ -2
ITGA4P13612 AL158823.1-201ENST00000418441 478 ntBASIC2.54□□□□□ -2
ITGA4P13612 AC069257.2-201ENST00000441819 155 ntBASIC2.54□□□□□ -2
ITGA4P13612 RN7SKP179-201ENST00000516126 217 ntBASIC2.54□□□□□ -2
ITGA4P13612 RNU7-25P-201ENST00000516544 62 ntBASIC2.54□□□□□ -2
ITGA4P13612 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.54□□□□□ -2
ITGA4P13612 SNORD14A-201ENST00000606526 91 ntBASIC2.54□□□□□ -2
ITGA4P13612 AC067747.1-201ENST00000608026 250 ntBASIC2.54□□□□□ -2
ITGA4P13612 AC006441.5-201ENST00000612680 209 ntBASIC2.54□□□□□ -2
ITGA4P13612 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.54□□□□□ -2
ITGA4P13612 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ITGA4P13612 AP006437.1-201ENST00000641440 3685 ntBASIC2.54□□□□□ -2
ITGA4P13612 MTND5P32-201ENST00000560711 1802 ntBASIC2.54□□□□□ -2
ITGA4P13612 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2
ITGA4P13612 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.53□□□□□ -2
ITGA4P13612 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.53□□□□□ -2
ITGA4P13612 RNU6-268P-201ENST00000364174 107 ntBASIC2.53□□□□□ -2
ITGA4P13612 SNRPGP14-201ENST00000435400 219 ntBASIC2.53□□□□□ -2
ITGA4P13612 AF228730.3-201ENST00000436691 102 ntBASIC2.53□□□□□ -2
ITGA4P13612 AL158147.1-201ENST00000443970 75 ntBASIC2.53□□□□□ -2
ITGA4P13612 RNU6-772P-201ENST00000516042 105 ntBASIC2.53□□□□□ -2
ITGA4P13612 RNU6-1116P-201ENST00000517269 99 ntBASIC2.53□□□□□ -2
ITGA4P13612 SNORA28-201ENST00000606769 126 ntBASIC2.53□□□□□ -2
ITGA4P13612 SNORA63D-201ENST00000364359 132 ntBASIC2.52□□□□□ -2.01
ITGA4P13612 Y_RNA.353-201ENST00000365440 108 ntBASIC2.52□□□□□ -2.01
ITGA4P13612 SNORD20-201ENST00000384550 80 ntBASIC2.52□□□□□ -2.01
ITGA4P13612 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ITGA4P13612 RNA5SP270-201ENST00000411361 118 ntBASIC2.52□□□□□ -2.01
ITGA4P13612 MIR376A2-201ENST00000636782 80 ntBASIC2.52□□□□□ -2.01
ITGA4P13612 Y_RNA.336-201ENST00000365307 109 ntBASIC2.51□□□□□ -2.01
ITGA4P13612 SNORA4.2-201ENST00000365313 147 ntBASIC2.51□□□□□ -2.01
ITGA4P13612 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
ITGA4P13612 SNORA48.1-201ENST00000390879 135 ntBASIC2.51□□□□□ -2.01
ITGA4P13612 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.51□□□□□ -2.01
ITGA4P13612 AC114811.1-201ENST00000507207 168 ntBASIC2.51□□□□□ -2.01
ITGA4P13612 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.51□□□□□ -2.01
ITGA4P13612 Y_RNA.712-201ENST00000517011 92 ntBASIC2.51□□□□□ -2.01
ITGA4P13612 MIR1273D-201ENST00000577266 86 ntBASIC2.51□□□□□ -2.01
ITGA4P13612 MIR4648-201ENST00000580107 72 ntBASIC2.51□□□□□ -2.01
ITGA4P13612 MIR5007-201ENST00000583098 95 ntBASIC2.51□□□□□ -2.01
ITGA4P13612 AL022345.2-201ENST00000606307 135 ntBASIC2.51□□□□□ -2.01
ITGA4P13612 MIR6873-201ENST00000622788 63 ntBASIC2.51□□□□□ -2.01
ITGA4P13612 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
ITGA4P13612 MIRLET7C-201ENST00000362160 84 ntBASIC2.5□□□□□ -2.01
ITGA4P13612 RNU6-163P-201ENST00000384396 106 ntBASIC2.5□□□□□ -2.01
ITGA4P13612 Y_RNA.563-201ENST00000384707 108 ntBASIC2.5□□□□□ -2.01
ITGA4P13612 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.5□□□□□ -2.01
ITGA4P13612 RN7SKP200-201ENST00000410564 320 ntBASIC2.5□□□□□ -2.01
ITGA4P13612 RNA5SP501-201ENST00000410990 112 ntBASIC2.5□□□□□ -2.01
ITGA4P13612 MTATP6P21-201ENST00000440681 189 ntBASIC2.5□□□□□ -2.01
ITGA4P13612 HMGN2P32-201ENST00000444648 269 ntBASIC2.5□□□□□ -2.01
ITGA4P13612 Y_RNA.651-201ENST00000459380 103 ntBASIC2.5□□□□□ -2.01
ITGA4P13612 RNA5SP236-201ENST00000516169 116 ntBASIC2.5□□□□□ -2.01
ITGA4P13612 RNU6-1149P-201ENST00000516810 97 ntBASIC2.5□□□□□ -2.01
ITGA4P13612 AC104984.5-201ENST00000586878 94 ntBASIC2.5□□□□□ -2.01
ITGA4P13612 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.5□□□□□ -2.01
ITGA4P13612 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.5□□□□□ -2.01
ITGA4P13612 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
ITGA4P13612 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
ITGA4P13612 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
ITGA4P13612 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
ITGA4P13612 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
ITGA4P13612 Y_RNA.547-201ENST00000384654 119 ntBASIC2.49□□□□□ -2.01
ITGA4P13612 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ITGA4P13612 CYCTP-201ENST00000504253 315 ntBASIC2.49□□□□□ -2.01
ITGA4P13612 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.49□□□□□ -2.01
ITGA4P13612 RNU6-1061P-201ENST00000516530 99 ntBASIC2.49□□□□□ -2.01
ITGA4P13612 SNORA31.15-201ENST00000516771 132 ntBASIC2.49□□□□□ -2.01
ITGA4P13612 AC133485.4-201ENST00000561835 220 ntBASIC2.49□□□□□ -2.01
ITGA4P13612 AC138907.4-201ENST00000570107 226 ntBASIC2.49□□□□□ -2.01
ITGA4P13612 MIR3124-201ENST00000582636 67 ntBASIC2.49□□□□□ -2.01
ITGA4P13612 MIR5197-201ENST00000583721 112 ntBASIC2.49□□□□□ -2.01
ITGA4P13612 MIR6715A-201ENST00000615929 79 ntBASIC2.49□□□□□ -2.01
ITGA4P13612 AC134878.1-201ENST00000619901 243 ntBASIC2.49□□□□□ -2.01
ITGA4P13612 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ITGA4P13612 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
ITGA4P13612 Y_RNA.81-201ENST00000362997 102 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 VTRNA1-1-201ENST00000363120 99 ntBASIC2.48□□□□□ -2.01
ITGA4P13612 SNORD115-28-201ENST00000363931 81 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms