Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 Y_RNA.298-201ENST00000364960 107 ntBASIC3.03□□□□□ -1.92
HOXD8P13378 Y_RNA.336-201ENST00000365307 109 ntBASIC3.03□□□□□ -1.92
HOXD8P13378 SNORA70B-201ENST00000384210 135 ntBASIC3.03□□□□□ -1.92
HOXD8P13378 MIR504-201ENST00000385065 83 ntBASIC3.03□□□□□ -1.92
HOXD8P13378 RPS29P6-201ENST00000438196 145 ntBASIC3.03□□□□□ -1.92
HOXD8P13378 RNU7-80P-201ENST00000459562 61 ntBASIC3.03□□□□□ -1.92
HOXD8P13378 RN7SL297P-201ENST00000483161 293 ntBASIC3.03□□□□□ -1.92
HOXD8P13378 AP003484.1-201ENST00000530974 250 ntBASIC3.03□□□□□ -1.92
HOXD8P13378 MIR3616-201ENST00000584070 92 ntBASIC3.03□□□□□ -1.92
HOXD8P13378 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
HOXD8P13378 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
HOXD8P13378 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
HOXD8P13378 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
HOXD8P13378 U8.5-201ENST00000364528 136 ntBASIC3.02□□□□□ -1.93
HOXD8P13378 Y_RNA.454-201ENST00000384224 113 ntBASIC3.02□□□□□ -1.93
HOXD8P13378 MIR196B-201ENST00000384852 84 ntBASIC3.02□□□□□ -1.93
HOXD8P13378 AC104332.2-201ENST00000429959 156 ntBASIC3.02□□□□□ -1.93
HOXD8P13378 Y_RNA.685-201ENST00000516532 108 ntBASIC3.02□□□□□ -1.93
HOXD8P13378 MIR4762-201ENST00000585261 75 ntBASIC3.02□□□□□ -1.93
HOXD8P13378 ZNF861P-201ENST00000588126 639 ntBASIC3.02□□□□□ -1.93
HOXD8P13378 RNU6-94P-201ENST00000607728 107 ntBASIC3.02□□□□□ -1.93
HOXD8P13378 MIR6817-201ENST00000615588 66 ntBASIC3.02□□□□□ -1.93
HOXD8P13378 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXD8P13378 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXD8P13378 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
HOXD8P13378 AP000648.3-201ENST00000623539 4507 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HOXD8P13378 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXD8P13378 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 RNU6-349P-201ENST00000362402 107 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 RNA5SP68-201ENST00000363885 119 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 RNU6-461P-201ENST00000364195 107 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 SNORD38C-201ENST00000384381 69 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 RNU6-163P-201ENST00000384396 106 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HOXD8P13378 RNU6-440P-201ENST00000390882 105 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 MIR1262-201ENST00000408276 93 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXD8P13378 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXD8P13378 STAG3L5P-204ENST00000443759 179 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 AL513328.1-201ENST00000446460 224 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXD8P13378 RNU6-830P-201ENST00000516353 107 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 AC068339.1-201ENST00000526965 141 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 MIR5009-201ENST00000578736 100 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 MIR3605-201ENST00000583214 100 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 MIR2052-201ENST00000636055 55 ntBASIC3.01□□□□□ -1.93
HOXD8P13378 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXD8P13378 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
HOXD8P13378 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXD8P13378 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HOXD8P13378 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
HOXD8P13378 RNA5SP493-201ENST00000364115 91 ntBASIC3□□□□□ -1.93
HOXD8P13378 RNU4-16P-201ENST00000364737 141 ntBASIC3□□□□□ -1.93
HOXD8P13378 Y_RNA.388-201ENST00000383919 113 ntBASIC3□□□□□ -1.93
HOXD8P13378 Y_RNA.440-201ENST00000384120 114 ntBASIC3□□□□□ -1.93
HOXD8P13378 RNU6-820P-201ENST00000384273 107 ntBASIC3□□□□□ -1.93
HOXD8P13378 RNU6-1275P-201ENST00000391087 107 ntBASIC3□□□□□ -1.93
HOXD8P13378 snoU13.26-201ENST00000459452 105 ntBASIC3□□□□□ -1.93
HOXD8P13378 RNU7-28P-201ENST00000516759 62 ntBASIC3□□□□□ -1.93
HOXD8P13378 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3□□□□□ -1.93
HOXD8P13378 MIR3163-201ENST00000581592 73 ntBASIC3□□□□□ -1.93
HOXD8P13378 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3□□□□□ -1.93
HOXD8P13378 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3□□□□□ -1.93
HOXD8P13378 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
HOXD8P13378 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
HOXD8P13378 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXD8P13378 MIR887-201ENST00000401258 79 ntBASIC2.99□□□□□ -1.93
HOXD8P13378 AC099677.2-201ENST00000436385 175 ntBASIC2.99□□□□□ -1.93
HOXD8P13378 AC087499.4-201ENST00000448505 178 ntBASIC2.99□□□□□ -1.93
HOXD8P13378 RNU7-123P-201ENST00000515911 60 ntBASIC2.99□□□□□ -1.93
HOXD8P13378 RNU6-158P-201ENST00000517104 100 ntBASIC2.99□□□□□ -1.93
HOXD8P13378 AC026271.5-201ENST00000577873 130 ntBASIC2.99□□□□□ -1.93
HOXD8P13378 MIR4305-201ENST00000583252 102 ntBASIC2.99□□□□□ -1.93
HOXD8P13378 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.99□□□□□ -1.93
HOXD8P13378 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.99□□□□□ -1.93
HOXD8P13378 AL590808.1-201ENST00000618696 141 ntBASIC2.99□□□□□ -1.93
HOXD8P13378 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.99□□□□□ -1.93
HOXD8P13378 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HOXD8P13378 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXD8P13378 Y_RNA.220-201ENST00000364244 109 ntBASIC2.98□□□□□ -1.93
HOXD8P13378 MIR548D2-201ENST00000384955 97 ntBASIC2.98□□□□□ -1.93
HOXD8P13378 MIR590-201ENST00000385008 97 ntBASIC2.98□□□□□ -1.93
HOXD8P13378 RNA5SP109-201ENST00000391010 116 ntBASIC2.98□□□□□ -1.93
HOXD8P13378 RPL39P25-201ENST00000449384 154 ntBASIC2.98□□□□□ -1.93
HOXD8P13378 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXD8P13378 RNU6-109P-201ENST00000516364 107 ntBASIC2.98□□□□□ -1.93
HOXD8P13378 RNU6-184P-201ENST00000516514 107 ntBASIC2.98□□□□□ -1.93
HOXD8P13378 Y_RNA.818-201ENST00000618813 71 ntBASIC2.98□□□□□ -1.93
HOXD8P13378 AC091932.4-201ENST00000623386 200 ntBASIC2.98□□□□□ -1.93
HOXD8P13378 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HOXD8P13378 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXD8P13378 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXD8P13378 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXD8P13378 MIR302B-201ENST00000362188 73 ntBASIC2.97□□□□□ -1.93
HOXD8P13378 SNORA63D-201ENST00000364359 132 ntBASIC2.97□□□□□ -1.93
HOXD8P13378 SNORA26.7-201ENST00000391288 122 ntBASIC2.97□□□□□ -1.93
HOXD8P13378 AP004217.1-201ENST00000480579 346 ntBASIC2.97□□□□□ -1.93
HOXD8P13378 RNA5SP148-201ENST00000516527 94 ntBASIC2.97□□□□□ -1.93
HOXD8P13378 AC084364.2-201ENST00000546924 395 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms